Contig Data
morexGenes
Links



Map Locations of contig_55442 (3412 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_55442

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_68838 1 1031 bp MLOC_68838.1 Available Available LOC_Os09g30160.1, FRAME:+2, EVALUE:1e-42, 13109.m03007 protein zinc finger, C3HC4 type domain containing protein, expressed





CDS Structure of MLOC_68838






Contig Sequence (3412 bp)

>contig_55442 3412 assembly3_WGSMorex_rbca.fasta
GTTCGAGACGCGGCCACGTTGCTTTCCCGCGCCTCGCTGTCGCCCGGGACGCGGGCCACG
CGGCGGCCACGTGACCCGGGCGTGGGCGGGTGGGGACGCCCCGCTCGCGCCGCGCTGGGC
GCACCGCAGAGCTCGGACGGCCGCCGGAAAGCAACGACGGAACGTCAGCGGCGACCCCGG
TGGTGTCGTCTCGCCTCGTCGGTACGCAGCACGACGCGCTTTCATTTTGCTTTGCATGCT
TTGTGTGGACAGGGCCGCCGGGCCTACAGGTTAAGCCGTGCTAATCACGGCCTAGATCGC
CGCAAGTTATCTGAAACCAACCATCGCCACGGAAATTCGCATAAAAAAACAACTCCCCCT
CGAATCTTCTAAGCTACTCCCGCGTAGAGTAATCGACTGCCAATTAACGTCGCCATGGAG
CATTCGAGACGCGCCTATAAACTAACACCCGTAGTAAAAGAAAGATCAGGTAATGGCCGT
AATCACTAGAAGTGCAGACTCAGCGGTATGACCACTTAATAAACTAGTATTAACACTGCT
TCCACGTAAAGTAAGATTGCAACAGTCGTGAAACCACAGGGGAGGCGGGAGGAAGAAAGA
ACGAGCGGCCGGGGGAGAGACGAGAGCAGACAGTGGAGTACGCTAGGCCACCAACAGGTT
GGCAGAAAGGGTGGAGCCGTCCACCGGATTTCAGATGTGGATCACCGGCGCCCACATCGC
CCCCACATATACTACTCCCCCCCTCCTGACTAGTCCACACGCGCCAAATCTCCCTCGAAA
TCCCGCTTATCCCAGTCATTAAGTGGCCAGAAGCACCCAAACCCTATTCTATCAATCTAA
TTTTTCTTTTTTGCACTACTAATTAAACTACCTGATCAACTTGCATGCTCGTTTGCTTGG
CTCCATATACCACTGCACGCCTCTCGTTTCACATTGCCACGCGCGTTCCTTCGTTCGTAG
ACTGGTGGCCACTGGAACGGCTCAGGCCTGCAGCTGCATGTGCCGGTGCAGTTGGGACGA
CGCCAAGCCAAACCCGCGCGGCGGCCGGGCGCTTAACGCAAGCAACCACCTTGTGTTAGG
CAGTTGATCGAACGCGGCAAAGCTCTCCCAGGCCACAGGAACTCTGCTGCCGTGCCGCCA
CTTTGCCCTTCGCTGTCGCCGGTGGAGCAAAAATGTTAGCGTTAGCAGGGAGGATTGATC
GGTGAACGAAGAACGAACGGTCGTCAATTAGCTGCGTAAACACGCACGTTCGTGTCGTGG
TCGCTGGACGGTGCGCGTGGGGGCAGAAATTCCAGTTTGCTTTCGGTAAAACCCTGCTAC
TAAAGATAGAAAATAGAAACGATTTCCGCAGATATGCATGGCTGTGCTTTGGTGTCGCCA
TCCATGGAGTAAGTAAATAAAGATACCGATCGGTCTCAGTTGGAGCGAGGACGGTGCGGG
TGTGAACGGAATTTCACAATAAACTTCCAGTAAAACCATAGTATATGAACCGACAGAGCA
GCGCGCCATTTGAAAACTCCACCGGCTTATTTAGCCCGGCCGCGCAGGTCAACAGGCCGT
TGGTGGTCAAGTTCAGACGCAACACAAAAACTTGAGCTGCACGTACTACTGGTAGTACTA
CTACTCCTGGGTAGCAGTCAAGCCAGCCTAACCGGACCGTTTATTATTTGTTTTTACGAG
AGCCCCGTTGATTAGTCGTCTGATGGATTACTGTTGACGGGCACATCACACGAGCAAGTA
CCCGTACCACTGTACCGGGTAGCTTGCCAAGCAACTTTCATCCAACGAGAAATGGTTAGG
TGCGTTCCACCGAGACTTTCCCCACGGCAAGCAATTAAGCAAGCAAGCAAGCAGCCACTG
GTGCTGGTCAAGACCCGACGCAGCCTAGTGGCCGGCACGCCGGAGGGCGCGGGGCACCCG
GCCGCCCGTCCGTCCGCTGAACCTGAACGGCTGAACCGCAGCGTCGGTCGCCGTCGGTCG
TCCCTGTCTCGCGCGTCGTAACTGCGTCGATCGGGAGGGGGCGTAGCGCAGTGGCGTACG
TAGCAGGAGATCGATTCCAAATCCGGTGCACGGGCCGATTGGGACCGGCCCGTGCGGGAC
TCTCGTCGGGTCGATTCGATTCGATTCAACCGGCCGGCCGCCCGCAGTCGTGCAGGCACG
GCAACCCGCGGAATTTCTCCTCTGGGTCTGGGATAAACCATTCCCGCAGAACCGGAAGAA
AATGCTGTTATACTTCCTCCAAAAAGAAAAAGATCCGCTTGTCTTTTCAACCGAAAAGAA
AACGAGGCTGCGATAATGTCACCCCCAGTCAAGCACGTCACGGTTGCTCAACAGATAAAT
GGCAGGAATTGCCGCTTACGTTCGGTAGGAGTAATGTGCTGAATAGAATTCCCTTTCGCC
CTCACTTGGCCTTTTTGATTGGGCGTCCGCCAATCAGCTTCGCCAGTCGCGCCTCATGAT
TTCCGGGAGGGAGAGTACACACACTGTCCCCGTGACAGTGAGATCGGTCACTCGACACCG
TGATCTGAGCACCGGCTCCGGTGCGGTGCACTGCACGTACAAATGCGTCCACCGGGCAGG
CCTAAATAATTGGCGGGCGGGAAGCCATGCACGCATTATTGGGCGCCACGGACCAAACCA
GAGCCGCAGGGGGGAGGAATTATTGGGCGCCCACGATCGAACCGCACCGCATGTGGGGTG
TCCCCCAGCGCGGGGTGGAGCGGATCGGACGTCCGTCGGGCGGATCCGACGGCGGTGGGC
TGCCGAACACGGGTCGCGGTACACCACTCGTCCGCCCGAAGGGGATGTGGGATGGATAGG
GAGGTGACACCAGCAGCGCCGGCTCGGCTTATAAATGCGCTCCCCACGACCCCCCCTCCC
TCACTGTATCCACCCCACCACCACCACCACCATAGAAGCTCAGAGCAGGCAGCCCCTGAA
AGAAGGCGAAAATTGCAGACGGGTCCAGGGATCGATCCCCAACACCGGCCGCCGCGATGG
GCATCTCCAGCATGCCGGCGCCCAAGGAGAGCCTCCTGATCTACCTGCTCTACCACGCGG
TCGTCTCGATCGCCGCCCTGGCGGGGCTCCTCCGCGCCGCGCTCGCCTTCCTCGGCCTGC
CCACGCCGCCGTCGCTGCTGGCCGGGGAGGACGCGGATGGCGGCGACCAGCTCACGGCGG
CCACCCCGGCCGGCCCCAGCCTGGCCGAGAGGTTCAGGAGCAGGTTCCGCCCGGCGCGCT
TCGGCCGGAGGCGGGGCGCGGCGGCGGCGCCTGACTGCCGCGTGTGCCTGGTGCGGTTCG
AGGCGGACGCCGTGGTAAACCGCCTCCCCTGCGGCCACATGTTCCACCGCGCCTGCCTCG
AGACCTGGCTCGACTACGACCACGCCACCTGCCCGCTCTGCCGCTCCCGCCT