Map Locations of contig_55416 (3972 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_55416

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_68829 2 1206 bp AK357441 Available Available None





CDS Structure of MLOC_68829






Contig Sequence (3972 bp)

>contig_55416 3972 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGATAGAGAAGGGGTGGAGTCCTCCCCACTAAGGAACTTTAGATCG
AAAGCAAGTTTATTGGGGGCTCAACGGTGTTCTGCGATGTGCTGCCTAGGCTTGCCGTCA
TGGTGCGGATGGGGCTTCAGTATTTTTGTTCTTTTCGTGAACAGCATCCAGTTAACTATT
TTTTTATTAGTGTGAGTCGCCGAAGGCACAATGTTTATTTAATTTTCTGTCAGGAAATTG
GCACAGTCATCGTGCATATATGGATCTAATGTCACAAGAATGGCTTAGGATGTTTCTGCA
ATATGTGCTGAAACAACTTGTTGTTTACAGGCGTAGCTGTGGGCTTCCAAGAACGAATTA
CAGTTTAGTGCTTCCAAAACTAAACGTGATGAGTGAGAGGATGCAGGTTACCTATTCGCG
TAGAGCTGTCTCTAAGAACAGTGAAATCAAGAAAGATGAACAAACAGTCATAGAAAAGGT
TAGTCTTGTATGCCCATTGTGCAAACATTTTTCGTTTACCCATCCCATGCTCATAATTTC
ATGTTTTTTTTTGAACCACAGGAAGATGACACTGAAAGCACATTGGAGATAGAGCGAATC
AGAGGTGACCCTAGTATGCTCCAATCCATGACAGTGAAAGAACTCAAGGAACTCACAAGG
TTCAAAATGTTCCTAGCCTCCCCTTATTGTATGTTTCTGATGATTGACTTACCCATTTAG
TTTTGTGTGCCATGAATTTGAAGGAGGATGGGAGTTGCTGCGAGAGGTAACAAAAAAGAT
TTGGTATCAGCTTTGTTGGAATCTCTGGGTGAGGAAGTAATTGGTATGACTTACTTGCAG
ACCTCCAGTAGTACCATTGAACTAAATCCATGCTTTCTTTGTATAAACTCTACATGTACC
TCAACAACCTCCTGATTCAATTATGACTTCTGCCCTAGTAATATGAGAGGATGTTCAGTT
TTTCCCGAGAAATTTAGCCAGAAGAATAGCAATCAGTACAATTTAGTGCATACATCTATA
TAGTGTTGCAATAAGCATTTTGGCTGAATGCTGATTCTTTTTCTGCAGGTAAAGATGGAA
CATCAACCATTGAGCAGATTGACCCATCAGAAGTACCTTCGAAAAGAAAAGGTGCCGCTT
CTGTAGTGGTTGAACAAAAGGTAGAAACGTCTGAAGTTATTTCCGCAACTCCTAACAAGA
GAAGTAGAACCAAGCAGAAATCAGTTAAGGGCTCCACTCCGAAGGAGAATGCTGTGACTA
CTGTCAAGATAAATAAGACATCACACCAGAAGGAAACAATTGTTGGTACGCTCATTGTTT
CATCAGTCCTGTTCATTTTTGGGCTAGAAAATTACTGCTCTCTTGGCTAATTGTGGGATT
GTCTCTCACAGTCAATGGTGCTGTTGAAAAGGCGGGGTTGGGTGATGGTGCAGAGCCTTG
GACTGTACTTGTACACAAGAAGCCACAGCCTGAGTGGATTCCATACAATCCTAAGGTCAT
GAGGCCTGCACCCCTTAGCAAGGATACAAGGGCACTTAAGATTCTATCGTGGAATGTCAA
TGGATTGAGAGCTTTAGTCAAATCTAGGGGCTTCTCCATTCATGAGTTAGCACAGAGGGA
GGATTTTGATGTGCTATGCCTGCAAGAAACGAAAATGCAGGCAAGATACTTGTTATTACA
TCATGTAAAGATAGGACAAGTGCGGTTCTTTCTTGCAAAGATGGCATCTGCTTTTTCTCC
TCTCTGAAATGTTGTTGTACTCACTCGAATAGTTTATCAACCGATAATTGTATTATTTTG
AGCAGGAGAAAGATGTTGAAGTCATTAAGGAAAGTCTACTTGAAGGGTACACCAATAGTT
TCTGGACATGCAGTGTGTCAAAGCTTGGCTATTCGGGGACTGCCATAATTTCACGGGTAT
GGACTGCAATTCTTGCACCCTAGCACCACCAATATTTTTTTTTGAAAGTTATGCAATAGC
ATTAATACGGCATGGGCAAGTTGCCCCTTACAAACTCGGCAGCCTGAGCCGGGACATCAT
ACTCCCAGTACAAAGCATAGTCAGCGTCACAAGCAACACCTAATTTAGCTAAACTATGAG
CAGCCATGTTCGCTTCCCGACAGCACTGAAAGCGAAACCACGTCCGCATCTGCATCTTCA
GGTCGTCCAGCACCACCGCATGCTCAGAGAAATCCCGGACGACCTGATTATTCACGGCAT
TGACAAGCAACTCGAGTCTGGTTCCATCTCCACCCTAGAAGCACCCAGCTCAGAAGCGAG
ATCAAAGGCATGAGTCATAGCCCAGAGCTCAGCCGCATATGCATCAGAGGCATTGAAGGT
TCGTCCTGCTTTACAGGCTACCACAGTCCCTGCATGATCCCGGACAATGACACCCTACGC
AGCAGTATTTGTCTCAGGGATAAAAGACGCATCAACGTTGAATTTCAGATTCTCCTGCCG
TGGGCTTTGCCATTTCTTCTCCTCCGTGCTTCTTCTCTTCTCCTTCTTCGGTCACAGCTC
CATGTACTCGGCTGTACTCACCCGGGCATCATGAGCGATCACCTGCTCAGATTTCACCTG
CTCTCCATTCCTCTTTTTATTCCGGTTGATCCACCAATGCCACATAAAGTGGAGCACCTC
CATCCTTTTCCTCTCTGGTAACTCCCAGATGATGTTTAAAGCCTCTTCAGCCGTGACTGT
GTTCTCCATCCGCATCCTGGTGCCCTCCAGTTCCAGGTCCGCCACACCTCTTTCACTTTC
TTGCACTTTATGAACAGGTGTGCACTATCTTCGCGAACGTACCCACACATTGGGCACCGC
TCATCCTCCAACACCATTCCTTTCCTTATCAGATTGGCTCAAACTGCAAGAGAATCATGT
GCTAATCGCCAGACAAACATTTTGATCTTTCCAGGACATGGCAATTTCCATATTCTTGTC
CAAGAACCTATCAGCACCTGCCCTTAAGTCTCCTTGGCCTCCAGAACTGGTGCTGCCCCT
CTCATCACCATTCAGCCCTGAGATCTGTAGCGCCACCAATATTGCCAGTGCTTCACAGTT
CACGTGTATGCAAATAAAATACCTATGTATTTTCGTTGGTTTCTTCTGTTGTATTGTGTT
TCAAGTTCCAACTGCAAGGAAATAATCAATAGAATTGGAATGAAGGAACAGAGTCCCAGA
TGCCTCCTTACCTGGGAATCACCCCATTATACCCAGTGGTGGGGACAAGGGGGACCAGCA
GGGGCCGTGCTCCCCCTAATATCATTGATTTAAGCCTAATTTCAAAATGATATTGATTTA
AGCCTAATATCATTGACTTCAGGATTTTTACTCTAGCCGCCCCCCTCCAACATTCAGATT
TTGCAAATCCTGCCTCCGCCACTGATTATACCAGTTTGCCCAGGTCCATTGATCTATCCC
TCCAACATTCAGATTTTGCAAATCCTGCCTCCGCCACTGATTATACCAGTTTGCCCAGGT
CCATTGATCTATGTTTTATTTTGGAATCTTTAACTCCAAATTACGTGAAACTTGGAAAAA
AAATGATATTGAAACACTTACTGAAATAGTGATGAAATGCAAAGAAAACAGAAGACCCAA
AGATAGATGACAGAAAAAAAGAGTATTCATGCAGTTCTACTTTCGGACTAGCCTATCCGA
TGCTCCATAATTACCATGTCCTGTTTTGTCTCGAAGCCTTTTTTTCATTCATATTCAGGA
ATCCTCCCTTACTGAAATTGAAAGCCAGCTTCATGAGAGTCTACCTGTGTAAAGAAAACA
TTAAAAGTTTTAAAAAACGCTCTAGCTAAAAATTATACTTCTGTAGCTATTAGTTTGCTT
CGAATTATCCTTGCATGACATCAATACATGTCACCTGTTTAATCATTGTGCTTTATGTAT
TTTTTTAATTGATACTCCCTCTGTCCCAAAATAANNNNNNNNACTTTATACTAGCTCTAA
TACAAAGTTGTA