| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_55386
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_68812 |
2 |
945 bp |
MLOC_68812.2 |
Available |
Available |
LOC_Os07g47620.1, FRAME:-3, EVALUE:3e-57, 13107.m05077 protein universal stress protein domain containing protein, putative, expressed |
CDS Structure of MLOC_68812
Contig Sequence (5574 bp)
>contig_55386 5574 assembly3_WGSMorex_rbca.fasta
GACGCCCTTGGGGCGGGGGGGGAGAGTGACTGGAGATGCTCTAACTCACAGGAAGGAAGC
TTCATAACACAGTTGCATGCTTGTGGCTAATTTTTTCGCATGACGGTCGCAGATGGCTAG
TTCCCACTTGTAGCCTGATTCAGGGACGTCACTTGTGGCTAATTTTTTCGCATGAGCACT
CTTGTATTCCCATGAGTGTTCACATCGATCAATAAAGCGTTGACAATTCTCAAAAGAAAA
GGTTGATGCTTGGGAATTGCCATGCTATGACAGATATACTCCCTCTATAAGCTAATATAA
AATCGTTTAGATCACTAACGTAATGATCTAAACATTATTATATTAGTCTACACAGGAAGT
TTTTGGCATACTATTATAGAAAAAAGAATCATGTTGACAAAAATGTGGTGCTAGCACGCA
AAATTTGTCAGGAGTTTGACATACTGCAACAGAGTAATTTGTCATGTGTTTAGGAATTTG
CCATGATGCAACATAGAGACTTGACAAGCTAAATAGAGGAACTTCGCCCACATGTTTTAA
AATTTGGCATGATGAACATGACAAATTGCAATGCTAGAGAGAAATTGATAATTGAACCCT
CCTTTGGGGTTTAAAGCTAGCTATGGAAATAAGATGTCTTGCTAATAATTTTTATTTCAG
AGATACACTGATTAAGGGTTAACTAGTAGGCTTTCAAAAGAAAATGTAAGCTTCTAGAAT
AAACAGGGGAGAAGGCAACTTATTTTGACAGCCAGCCATGAGCCTCAAAAGAACTGTGAG
TACTTGTCATGCTACATCATAAGATGTCATTGCTACACATCAAGTCGCTCCATGTGCTTT
TCAGTTTGACATGAAAGTCATGGAGGTACGAGGGGGCGATCGGATTTTGTTTCGGTAAGA
AGGAAGGGGTAATTATTTTCTCAATGAGTGCACCATCCATATGCAAATCTTGGCCTCTCG
AATTATAGAGAGGGAGAGGGGGCATGGTGCACAAGGGGAGGAGGGAGCAGTAGAAGCAAT
TTAGTCCTAGACAACAAAAAAATCATGAATTTTGGCCGTTTCGATCTCTTTCTTCACCAT
GCTGCTACCTGGCTCGAGCTTCCCATCCAACATCTAGCCCCTTATGTTTGAGCATACGCA
CCAAGCGGGCAATGAAGAAGGCCACAGACTAGATGATATCATCCTAATATAGGCAAGATA
TATTAATTGATTTTTTTCTTCTTCTTTTTGGATATATTTCTAAATCAAGCATTAGTTTGA
ACGATACATACTACTCGTTTACAACTAAGCACTCTCAGCTCCACACAACATAGAGATTGA
CACGCGGAAAGGACATACTCCCTCCGTTCCTAAATATAAGACCTTTTAGAGATTGTATTA
TAAACTACATACGGATGTACATAGACATATTTTACAGTATAAATTCACTCATTTTGCTCT
GTATGTAGTCTTCTAATAAAATCTCTAAAAGGTCTTATATTTTGAAACGGAGGGAGTATA
ATATTATTTGAGGCATGTTGTCTTCTTTATGCGGGGCAGCAATAGGTTCATCTAAAACAA
TGATTTCACTTACCAATCATAACAAGAGAGACAATATATAATCGGCAACGCTACATCGAC
GGAAAGTTCCAGACATTTTATAGGGTAATATTGATTGGTCAAGTAGCGATGGGATTAAGG
GGGGAGTGAGGGGCCCCACCCGATGAAAATCAGTAAGATGGAGAGGTTATTAAAAAAGGG
TCCGTAAAACACCTGTAGAGAGTCAGTGCGTTTAGCATTTTTAATATACAATATTCCATT
CGTCCTAAAATTATTGTCTTAAATTTATCTAGATATAAATATGTCTAGTTATATTTTAAT
ATTTAGATACATCATTTTTTAGGCAAACTTAAGACAAAATAATTAGGATGGAGGGATTAT
TGGTCAAGACAACTACCCCGTGCCCTCCCACTGAACCCTCTTTCTATCAAAAAGAAAGAG
CGCACCAAAACAAAAAAAGAATCGAGAAAAAGCCGTCGTCTGTCATTGTCTAGCAACACG
GCTTGCACCATCACGCATACCGTAATTGGATGGCGCCGCCGATACAAAGAGAAATTGATT
AAAGCGAGTAGAAGATGGTTCAAGTGCTTCAAAAGTTAGTACTATTAACTGGAGCATCCA
ATTTGGGATCTGCTTTCACATTGTGTTGGTTTCAGCAAGGTTCCTTAGAATTAACCTTTT
TCTTGATTGCACTTTGCATTCATAAGTACTGTACTTTTAAACTAGTGTTGATTGAAGTAA
AAAAAAAAAAAAAAAACTAGACCAATGTGTACAATTTTTCTGAATCAACTAAATTTTATA
TTGGGTCAATGCTATTTTTGCCCGGCTCTCTTGCATTGTTGGAATGTTTCTATTCCATTT
TTGAACTGACACTGCTGTGATTTTTTCGACTGAGTGTATTAGATTTTTAGTCTAAGTCAA
TACAGTTTTTGTTAAGTCTACAACAATCCATTTTTGTTGCCTTATGCAAGTAAACACTAA
TAAAAACATGAAGGCGTTATTTAACAATATTTTCAGACTAAGTTTATTTTGAACAAAGAA
ATAGTTGTCTTATGCAAGTAAACAGTAATACAAAATATTTCATTTTTGAAACTTAAAAAT
TGCGTAAAAAGTTCATCAAAAGTGAGGGATCATTGAATGGTGAGTCTTTCGAAGAAGGCC
GTAAGGGCAAATTTGTGATGATATATGAAGATGAACTACAAGCATCATGTGTGGCACTGA
TAATGTTCTTTCTGTTTTTACTTAGTTTAGCTCTGTTGTAAGTCAAAATGTATAAAGTTT
AACCAAGTTCATAGAAAATAATATGAACGTTAATAAAAACAAGCACATGTATTGTGAAAA
TATATTTGATGAATTTAACGTACTGATTTAGTATTTCGTATGTTCATAACTTTTTTCTAC
AAATTTGATCGAAAGTTACACAGCTTGACCGCTAATATGCAGAATAAAGAAGAAAGGGAG
TACACACTTTGGAGTAGAAATAATTAGTAGGGATACATTGTGTAGGCACATAAATGGCAC
AATCCCAACACTGGAAGTGGGCACACGATTGATCTAACTCCGGAAATGGAGGTCAGTTCT
TGAACTTGGGCTGCTTGACTATCATCACAGAGCAGTGCGCGTGGTGGGCGCAGTAGTCGC
TCACGCTCCCAAGCAATGCCCTGCGAGAAAGAGGAGTTGAGACAAAAAGCCCGTCACGAT
TAGACGATCGGCTTTGCTAAAATTCAGTCAACTGAGAGCGAAGTCTCAGTCAATACTATA
ATCAGTCGACTTAGACGATATAGTGCGGTCGAAAATCAAGCACCTCTTGATGGCGCCGTA
GCCGTGGCTGCCGACGACGAGCAGATCGGCGTGGTGCTTCTCGACGGCGTTGCACAGGAC
GTGCCTCGGCTCCCCGTCGACCACATCCACCACGCCCTGCACCTGCATGCGGTTTCGTAG
AATAGAAGCAGCAACAGGTTTTACGGATATGCAACGTGTGATCGTTAATCTATCGGTCCA
TGCCGCAATGCGACGAGCTGCGAGTAGCGGATGTTATGTTACCGAGTTGGCGACGCAGAG
GCGGCGCGCCTTGTCGACGACGCCCTCGGCCTTCTTGCGCAGGTCCGCCTCCACCAACCT
CACCACGTCGCCGGACACGCCTGACACGAATCCGCAGAACTCATCAGTCAAAGCTCGCTC
CGATTCGGGAGCACGAAACGATGATGAAGCATAGAAGAGGAGGTTAACGACGCACCGGGG
CCGCCCATGGTGACCACGGGGGAAGGGGGCGGCTTGGCGTGGACGACGACGAGCTCGACC
GCTCCGGCGCCGGCCACCCCGGCCCTCGCCGCCACGTGCCGCACGGCCCACTCGAGCGCG
CGGTAGCTGTGGTCGCTGTCGTCCACGGCGACCAGCACCACCGTCTTCCTCCTCCCCTCC
TCCGCCGGGCCCGCCTCCGCCGCACCAGCCACCGCCTTGGTCTCCGCCATCATATAGCAA
TCGAACGACGCGACGATTATAACTGATGATTTTAGAGAAGGTTTCTTGGTTGAAGTGGTT
ATAGCTCAAGGCCGCGGGGCTAGGCCTATATATATAGCTTACTTGTCTGTCAGCCGCCAT
TGCGGGTGTGAGAGTGGCGAAACCGGAGGCGCGGTTACGAGTGGCGGGAGCTGATGACGG
CAGGGCTCCCCCGGTTTCCGTTCTGTTATGTTGCTTTTCACTTCTCATCATCTGCCCGCT
GGATGAGGACGGCGACGGCAGCGACGGTTCGGGGGGATGTTGCGGTCGTTTCTTTTCCGT
CGGTGCGTGCTGATTCCTGATGCACTGGAGATGCGTGTTGGGATTTGGGTTGGAAGAGAA
TTCGAGAGCGGCACCTTCGTCTTGTGAGAAGAAGATATTTTGTTTTGGCGGGTTGAGAAG
AAGATGTTTGGTTTTGTTTGCTAAATCCCAAGTAATCTAAGATTTGTTTTATGTCTATCT
AAGTTTCCTGCTGGAAAGTGTAATTTTAGTGTACTCTTGTACATTTCGTAGAAAAGAGCA
ACTTCATTAAAAATGCAATTGCAATTTTCTAAATTGACCTAGATATAAGCTTCATCAAGA
GAAACCTTAAGAACCATGTATATTAGCGTTTCTATCGAACCATGGTTTACAAATTTATTG
GCCTTATCCAAACATAAATCTGTAGCCAAGTGAGATCACAACCACCGCGTCGTCCCACGG
GCGGCTCGGACAGTTGACCAAAACCACTACCTTCACCCCTAACCTTCCTCTCACTCCCTC
TCGTCGTTGTCGGTTTTCGTTGGTGGGCGAAGCCCGTGGGTGGCCGGCAGCGGCAGGATC
TGCTACATGTGGTGGCATTTTGTTCTGCAGCGGCGTCCAAAATTGTGGAAATGATCGTAG
TTATAAAGATTGTTATTCTTGTCAATTGTCTAGGTGTAATCTGTTATCATGCCGGTTGTC
TTCTTTCAAAAGAGATATCTCTAGTGAACCTATGGTCTCCGACTCTATTCTTCCATCAAT
AAAAACTCTTACAAATTTGCTTCTTTACTATTTGCCTTTACTTTTTGCTGTAGCATTATC
TATCTATCTATTTCCTTTTAACCATGTACCTAGCAAGACAAGGAGCTTGGCAATCCCTTC
GCTACGTTGGATGCAAGTATTTATCTTATTCTTGTGTGGAAAAAGTCCACAACGAACCTT
GAACTCGTAGGGGCTAGCGAAATCGAACCCTGAACTGTCAATCCCGGTAATCGGCACTCT
GAACTCTTTGATCCCGGTCTAATTCGAACCCTGAGTCCTCTTGCCAAACGGGGATTCGCT
GACGTGGCCGGGATTTCTGTGGGAGATAGTTTTTCGGCCGGTCCGTCGCGCTTATGGGCC
GAAAGAAGATGGGCTTATCCTCTGCACCCCAGCCATAGAGCACTGTATCTGCCCATTCTG
TGGCCCGACCAGTCCAGTCTCTCCACTCTGCCCCGTCTCCTTCTCTGCTCCAATGGCGGC
AATGGCGACGGGCGGATGAACGGAGCGGCGACGATCGTGACCGCGCGACGAGAA
