Map Locations of contig_55289 (3387 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_55289

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_68739 3 1366 bp AK374013 Not available Available None





CDS Structure of MLOC_68739






Contig Sequence (3387 bp)

>contig_55289 3387 assembly3_WGSMorex_rbca.fasta
TTTTCCTTTTACGTTGCAGATAAATGATGGAGCGTGGGTTGAATAACAAAAATTACAGAG
GTTTTTTTATAAAAATGCCGCGGTGGGTTTACAACGAAAACAATAGCCTCTTTATTACTA
GGTATAGATGCTCATTGGGTCATAACAATGGATGTAAGGTAGTCAAAATTGAAGATTGAC
CCTAGATGTAAGTTGAGGAAAGGTTTTCACCCTGCATAATAGTGGCATAGTCTTCAAATT
ACTCCACCATCATCTTAAAGCATCTAAAATCAAACTGAGTAAATCTGATCCCCTAAACAT
TCACATGATGTCCGTATGCATCCGTCGACAAAGTTGGCTTTCCTATCATTTATCCGTCAC
TTCAATCGCATTCCATGTTTTCATCATATGTACATCATATTACATGAAACAAACAAATAG
ACTACCCTAATTTTACTTGTCATCGTCGAAGATGTAGATGCTCCCTTGCCGGACATACCA
GTCTCATGGTCACTGACGGAGGGCGAAGCTCTGGCTTCTCTTCCTCATTTCCAATGTTTG
TGAAGAGTTGCTCCTACCTCACACCAGCAAGGTGGGCGATGACGATTTGACGCCACCTCC
TATTTAGATTCGATTGAGTCTAGGATGACCGCTTGCTTCACCTCAAACTGTGTTGCCGCC
TCCACGGCTTGGGTGTGTTGGAACTCCGTCTCCGCGTCCTTCACGCAAATCCGTCGAGCT
CAACCTTCATGTTTGATGCCTCCTATGCATCCTCTTCCTCCGCGACGTGAGGAGCCCAGT
GTGGTGGATACGTCCGGGCTTTCTTATCTTCACCGGACATATGAGCTAGATATAAGGGAT
GCCGAACAACCAAGACGTTTCGGTTCGATTTGAGGTGTCCGGTTGAGTGATGATTTTGTG
ACCAGACCCTGTCCAGAAGTTACTAATTCCTCCGTACAAAATTAATTCTTTTACGTCTGC
GTAGATACGGATGTATATCTAACACTAAAACGTGTTAAAATACGTCTAAATCTAAGCTCA
TATGTATAACAAATTTGGAAGGGGGGTAATATAATGTAAGACGATGGACCACCGCCAAAA
GAAAAGGGATGGTGGTGTGCGTAAGCCCAGCCTTCTCCGGAGCGGACTAGAAGAAACAAT
GTCGCTATAGTCATGTGACAGTGTGGCATGGACGTACATATGGGCGCACGAGCGGCAGCG
CGATGAGCTACGTCGTCGTCTCTTGTTGACGATGCCGACCGGTGTGGCGCATCCGGCACC
AGCGGGGGCACACGATTTCCCCCATGAAAACGAAGGATGCTACACCCAAACCGTTCGTCC
TTCCCATTTACCAGCCACCCCCGACGCACCGCGCTAGCTTCGGGCGCATCATTGCTCTCC
AGCAGCATCAATCACCACACCAGCACTGCTGCTGAGAGCTACGTAGGTGACCATGCGTGC
TCCTGTTTCCGGGTGACCTGAACCGTCAGCTGCCTGAAAGAAGATGACCGGCCGGCCGGC
GGTACCTGCCGACAGCAAAAGGGACGCCTGTGGAGCGTCGCCCGTGCCCAAACAGGGCCA
AATTAAGACACTCCTGCACACGAGGAGAGGGATGGCACTGGCAGACCCCATTAATCAGTT
AATTACTACTCTACTGACTGCTACTCCTGCGTGGTACTAGTAGAAAGGTTACAGTGATCG
AGCTTGACAAGCTCCTGCAGGGAGACGATGGTGGACGGGACGGGGAGAGAGGCCGGCTGG
CTGGGCGCGCGACACATGCGCAGCTAGGGGGGCATGCAGAGCAAACAAACACGCCATGTG
GTCTCTCGATCTCACCCCATAAACCCCATCCATCGATCGGGACCAATCTTCGACGTTCTT
CTCCTCCTCCTCCTCCTTCTCCCATCACACACACACCCTTGCTTTCACCCCACAGATCCA
CACGTCACCACGCTCACGCTCGTCATCAGCTGTCTTCTTCTTCATCTCAAGTCGTCCTGC
TCCAGCTGCAAGACCAGATCGATCAAACGGGAGAATTTCGAGCTAGCTAGCTATACGCAT
CACGTATGTCGTCCAGTAATTAACTTCCGTGGCATATTTGAGCATACATGCATATTTACA
CGTTCTTTGGTCTTGCATGCTCTGCAGAAGCAGCGAAGCCCCACGTAGAGGAGAGGAGAG
GAGGAGGAGAAGCATGTGGGAGTCGGAGAGCGACGCCGGCGAGCGGGGGCTCGTCCCCGT
CCTCGGCGGCGGCTCCGGCCGCCACGACGACGGGCTCAAGAACGACGGCTTCGTTCGCAG
AGATCAGTCCTGGTATGTGCTCGGAAGCAGAACCAAATATGCATGTAGGCTGATTTCCAT
TTCCTTGTGTGCGCTTCGTTCACCTGATCGTCGATCGTCTTGTTCTTTCTCCTGCGATTT
AATCCGAGCAGGTATGTCAACAGCGACATCCCCAGCGATTTGCTCGTCAAAGTGGGCGAT
GTGAGCTTCCATCTTCACAAGGTACGTACGTGCATGACCCTTTTTTCCTCTCCAACAGAG
CAGAATCATCGTCCACAATTCCGTAGCAGTATCAGTACTAGCTAGACTACCAGTGGTACT
GGTACCCGGCCACCAGCTCAATCATTAGACATTTGTGCCGCTTATAGAAGACTTTGAGTT
TCTTATTAAATCCGCTCTTGCGTCTCAAAAGGACAACAATTTTGGCGCGCGTCCTTGTAA
TCTACACACAAGTTGATTCAATTGAATTCAATTCAACAGTATCCAACCAAAATTTTAAAC
TGTTTATTAACTTGATGATCGGTGCACGTACGTACGGCTACCGACGGCGAGCAGTACCCC
ATGATCTCCCGGAGCGGCAAGATGGGCCGCGTCATCTACGAGTGCGCCTCGGCGGCGGTG
GACCAGGACGCGGCCGTGGCGGAGCTGGACGAGCTGCCGGGCGGAGCGGACTCGTTCGAG
CTGGCGGCCAGGTTCTGCTACGGCATGGCGGTGGACCTGACGGCGTCCAACATCTCCGGG
CTGCGCTGCGCCGCCGAGTACCTGGAGATGACGGAGGACCTGGAGGAGGGCAACCTCATC
TTCAAGACGGAGGCGTTCCTCAGCTACGTGGTGCTCTCCTCCTGGCGCGACTCCATCGTG
GTGCTTAAGAGCTGCGAGGGCCTCTCGCCGTGGGCCGAGAACCTGCAGATCGTGCGCCGC
TGCAGCGAGTCCATCGCATGGAAGGCCTGCGCCAACCCCAGGGGCGTCCGCTGGGCCTAC
ACCGGCGCCACCGGCGGCCGCCCGCCCAGGAGCGGCGCCGGCACGGCCAGCCCCCGCTGG
AACAACGTCGGCGGCGGCGGCGGCGGCGCCCAGCAGGCCCGCCCAGCCCGCCCGCCGCAG
CCGGCCGGCGGTCCGGTGGGCGAGGGC