| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_55111
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_68652 |
1 |
1578 bp |
MLOC_68652.1 |
Available |
Available |
LOC_Os08g13030.1, FRAME:-2, EVALUE:2e-128, 13108.m01392 protein MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain |
CDS Structure of MLOC_68652
Contig Sequence (8357 bp)
>contig_55111 8357 assembly3_WGSMorex_rbca.fasta
TGTCCGCAAACATCCGTGTAACCGCGANNNNNNNNNNNGATACCAACTTGTAACGCCCCA
GACAGACCCGTCGGCGGTCGTTACTTGTGGCAGGATCTAGACTGGCCCCNNNNNNCAATA
CTAGTCTTTTCTGCACACTTTCTCCTCACTCATGCGCACCCGGGATAAACTTTCCGGTCG
GTCACCCATCCTNNNNNNNNNNNNAGCCAAGCACGCTTAACCTGGGAGCTGTGTTCGAAT
GGGCTCCTGGAATAGAAGGAATTCCCTCTTGATATGAGTAGTCTATCATCCTTAATAAGC
GAGGCTATTACAATCTATATCTTTTTACATTTTCAAAACGGCAAAAAGAAGGAAAAAGTA
TGATCTTGCCTGATTTTGGCATTGACTTGCATTAGCACGTGGACAAATAGGGTTGCAACA
TGAGTTTCACGTGTAGTAGCACTTGTGTGGTTAAGATTTCTTTTCTAGTGAGTCGAAGCT
GTCTAGATCGTTAACCATAAGAGCTCGATGGTCCCCATAAGATGTTATGGCATATAACTT
GGACCCATTTTTGAAACTTGCTAGTAAATACAACAACCTTCTTCACAGATATTTGGGGCT
CCCGCTTTCCGTGTGTCAATTCAAGAGGGTGGACTTCGAATTTTTGGAGGACAAGATGGC
ACCAAGATTCCCCGTGTGAGGGCAACATCATCACCATTGGTCGCACACCACTTCTGAAGT
TTGCGTCGTCTGCCCAAGTGGTCTACTTCATCACCCGCCATGGGACCACTGTGCACCCTG
TACAACACAAACAAGCTCGATCATGCCTTTCTTTGGTCCAGCTTAGACAATACTATCGAT
GAAAGTTGTCAATTTAACTAGGATTGGTATGTCAGCCTTTTGAGCGTCGAGGACCGGGAG
TGCTCAACATCGCTAAACTCGTGAGAGCCCTCCGTTCAAGATGGCCATGGTACTAATGGA
AGGAGCTGTCAAAGCTTTGGGTCGGCATGTGCAACCCTTCTGATTAGCAAGACCTTAACT
TCTTCTATGTCTCAACCATTATCGCCATTGGGAATGGTGCAAAGGTGCCCTTTTGGGACG
CACCTTGATTCAATGATCGCAAGCCAAAGGAGATTGCTCCTGTCATCTATAAAGCTTCAA
TAATGAAAAATTGGAAGATAAAAAAGCTCTTTTCGAGAATGCTTGGATCTCCAAGATTAA
GATTTTCGCCGACATTACTTTCTAGCACATTTTTCAATTTGCGACCTTGTGGACAACCAT
TCACGACTTTCACCTTGAAGAGCTTGGAGAGGACGATATTGTTTGGAAGCACACGAGTGA
TTGACAATACTCGGTGGCTTTCTCCTATGAGGTACAATTGCTAGGAACCTTCTACTCACC
CATGGAGCATGTGGTATAGAGAACTTGGGTACCCCCAAAACTCAAGCTATTTGCTTGTTT
GGTCACCAAGATAGGCTTTGGACCTCGAATAGATTAGCCAAGCGTTGCTGGACAAATTAT
GACATTTGCCCGCGTTGCAAGCAGGTGCAAGAATCAGGAGAGCACCTATTTTTTCAAATG
TCGCTATACAATATGTCTTTGTAACTTGGCAAACGATTGGCTTCACCTTGAGAGCATCAA
CACCTTTTCTTGGAACCTTGAGAGATTCGTCAAAAATGGTGGATCAAACGGTCTGACATC
TTTACGGCTAATAGGAAGGTCATGCCATCCCTCATCATGCTCATGTGGTGGACTATTTGA
AATGAACGAAATGCCCGCGTGTTCCACCACAAGAGCACGCCATCGCCGATCCTGATCAAA
TACATCAAAGGTGAGGCTTGTCTTTGGATTACCGCTAGGGCTGCAAACGAGTCGAGTTCG
AGAGAGTTGGAGTTGGCTCGGTTCAACTCATATTAAATTTCGGGCGATTTCAAAGTTAGT
GATGCTCAAAATCAAGTTGTAGAACATGGCTCGAGCTCAGTTTGTAACGATCTCGAGTCA
ATCTCGAGCTACTTTCGAGCTAAATGAGATGGTAAAAAATATATAATTCCATGAGGATTC
AGACACAACACATGATCAATCTCACTATATCTCGCATCTAGAAAAGGAACAACCAACATA
TTCAGAGATCGTTCATTCCTTTATAAATTATAGTACCAACTGGATGACGCGAAAGTGAAA
AAAAAATGCTCATTTCAATTGAAGGTACGGCCGAGAGCTCATCTTGATCTCTTGGGCGAA
CTACCAATAGATGGTGGTATTCGTGGACAAAAAACAAGCACATGGTCGAAACTTTTGCCA
AAAACAATAGGATATTTAACACATTCGACCACATGGCATAATTAGGCCAAAATCTTCTCT
GCACTTAACTAATCTTCCATGTTTGTTGGTAAATAAATGAAGAAAAATTGTAGTCAGCAT
ATATATATGGTGGCAAATTAACTTATTTTCATTTAATAGATGACATGATGATTTAACACA
TAATAATGATATTATGTCGAGCTATCGAGCTAAAATCAAGTGAGTCAATATTGGCTTAAG
ATCGGCTGGTTTCTCGGTCGAGCTACATAAAGTGTTCAAACTAAGCTCATTTCTTTTTGA
GTCATCTCGAGTCGAGCAAAAAAACGAGTCAACCTCGAATGGCTCATGAGCCTCGAGTTT
TTTCTTGCAGTCCTAAATGTCGCAAGTGCGAAGAAAATGCGATCAATCATTTTAGGAGAG
TAATCATTATGTATCTTGAGGACTGTAATTCACACTCTATTATCCTCTTAAATAATATTT
AAGGCAATTTTTTGCCTTCATTTTAAAAAGCTATGTGGATTGGTACTATTTTTACTTTTC
AAGTTATGTATGTTAGGGAACAAATATGTGGTTAGATGGTTAAGAGGACGTGGTATCCAC
TATCCATCATATTTCAAATCACATACTTGACACTGATGCTCGCATTTTCCTGTACTATGT
GCGTTCAATGAAAGGACACATTCCCGTCCACTATAAAAATGTATATGCGTATGTGTAAGC
GTCTGCTTGTTTTAAAAAAAAGTACGGTAAAGCAAAGATGAGATTTACATCATAAAACAT
GTACTTTCTAAGTTATGTACTCTAAAGTATAAATATATTTTTCTGGCAATAACCCATACC
CAATATTATTTGGACACATTATTCTTTGTTGTTGGGTAAAACCGAAATAAAGTTTTTTTT
GCCAGATTGCCAGTCTCTCAAGAATCGAACCCAACACCTTCTAGATTTTTTTTCCTGTTG
AGAATAACACCTTCTATCATTTTAAGGTTCAAGAACATATGCCATCTGATGGGCCGTGAG
TACAGATTTTATGCAGACGTTGTGTTTAACAGCGTAATGGAACGGCGCTTACTGTGCCAT
GGGTCCGCACCAGAATCCTTAATATATAATGCCGTTGCTTAGAGTATCTCTGGCAGACCT
CGTAAAAAGGATGAATTCGGATAATTTCAACGAGTATACATGTTCGACCCTTTTACGGAG
CGGAGGAGGTCGTCATGCGCAACCACCGCGAGCTCGAGATCGAACAGATCTTCCTCGAAC
AAGATATTACAGTGTCGCAGGCGATCGCGTCCAAGGAGGCGGACCTAATCATCATGAAGG
CTTAGCAGGACAAGATCTAGATCGACCTTGACACCGACTCCGACGAGGACTGAGCTCCTC
CGGCTCCTCCGCCGCGTCGTCGCCGCCGCGACCGTTATTTTTGATAGCCTAGGCTCAGGT
ACGTTGTACGGCCCGCATTTCCCACCCCTACCTAGTAGTATGAAGAACTGACGTAGTTTG
CTGATGAAGAATGGTGTAGTTTGATGAAGAACCATGGTTCATTTTGATAAAGAACCATGA
TGTAGTTTCATCCGCGAACGTTTTCTTTTTCAAATTTTATAGTTTCATATACGGGGTTTG
ATCTTTGACGCATGAAATGACCCCGTAAAATTAATCTGCAGCGACCTGTAAACATATTTT
GCGAATCGCTCTTTTACGGAGTCTGCTAGAGATGCTAGCAGCAGATACATCCTTCAATTC
GAGTCCAGTCTCCGGTCCCAACGAGAATAAGCGGGCAACGATAACGTCAGTAGGCAAGAT
GAGCACTCCTATGATTTTCGGTGAAGAGATTCCTATTATTATGTCTCGTTATGTAATATT
TCATCGGTTTTGCTAGAAGTCATCTAGCTAGATTTTAATTATGTCTCATTCATCTTTTAT
AACCATTGAATGTGACTATAAGATGTGTGTGTACTGATGTGTATATAGTATTACTTTATA
TCTATTTTTATTTTCCAGGTGAATGAGACCAAATTATATCTAATCTAGATGAATTTTAGA
CACTCTCATATTTCATGGTCTACCGGCATTGTCTTCCTGTTAGGTCTGGGATGTTGTAAA
CTGAATGTTTATATTTATGTTTAGGGATATGTTACACGTCCGCCGACTGATCTTTTAAAA
AAATCAGTTGGTCACAAGCCGTCGGATCTGCCGCATCGAGCGTCTGAATGCGCCTCCACC
ATTGCAACACAGGTCTTGTTGCGAAATTAGTTTTGTAACACAGGCCTTGTTGTAAAATTT
TAATTTTTGTTGCAAGAACTATTTTGTTATAAAAAAAATTTAACTAAGGTTTTGTTGCAG
AAAAATTCCATAAAAGAAGTTTGTTGCACAACATCCGCATATGTTTCAGAAACATAGCCC
TGTTGCAGAAGCGTGTTTGTAAACGCGTGTCATGCTGAGAAGGTGACGGACGCAGCCGCT
GCGATCCATCGGATGATGGTAAGCATTTTCCTTATGTTTATGAATGATGATCTGAAAAAG
AGGCGGCGTGTTAGGCCGTTCCATAAAGTTAAACTTAAAAACTGAGAGCAGCATCTTCGC
ATTGCTTAGCTCAGAACACGTGAACATATAAGTCTTTTTAGAAATTTTACTAAAGGGCTA
CATACGAAGCAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATACATCCGTATGTA
GTCCCTTTAGTGAAATCTCTTAAAAGACTNATATTTAGGAACGGAAGGAGTAATATAAGT
ACAGCCAGGGTTGCAGTGGATCAATACAAATTCAGGAACATTCATTCCTCAAAATGTTAT
ACTCCCTCTACCTAAATAATTATAGTTGAGCAGTATATGCAACAAATCGTATACGTTTCG
ACGAGTTTTTTTCTTTTCAAGTGCACCAGATTGTAAACGATGTGCATCTTCCAGCTCCCA
AAGGAACACAATCAACAACACGGTTGCATAAAGTAGTAACATTCCTTCATTTTGAGATCA
TAACGGTTCCACACATGATATTACACTATTTGAGCGTCGAAAAGCTTCAGGAAAGGTGCA
GATAACATAAATAAACCTCAACAACCGCATGTAACTGATTTTAGTACGCATGAGCTGCTC
TATGATATGCGAGGCCTACTTCTCTTCTCTAAAGCATCTATCAAGACAGACGGGCAAGAT
CTTTTGAGATTTGCATAACCTTTGCTTGCCACCACATCATCCATCTTATCTGAAGAGGCA
ATAAATTCAATGCAAACATCTTTAAGCTTGTCACAGTTATGCTGATCAGCTAAAGCCAAT
GTAGTTGCCACGTTCTCCACATCAAGACTCTTGCCAAGGATGTTTTGACACATAAGCTTC
AGCCTGTCCATGGCATACTTATCTGCAGCTACCAGCAAATGCCGGATCATTTCACAGTTA
TCATCGCCTTCAAGATCATCAAAGTCAGGCAATGAATCTGTATAGATGAAATGCAACAGA
GCCTTGAAAACGGCGGGCTGGATATCTTTGACGGTCAAACGCCGCATCTTCTTCTCCTTC
ATCGGCCCGAAGAGTTCTGCTTTGAAGACAGGTGACCGCATGGCAAGGAAAATCTTGTGC
GCCTGAAAGGTCTCACCTCCAACATTGAAAGTGACATCTGCTTCCTCCTCACTGTCCAAC
AGCTTTGCGAGATGCTCCATGATGTCTGATGGCGGCACCTCAATTTCAGAGTGCCCCACG
GTTTCATACACCTCAGATTCTTTGATTACCGTCATATCACATCTGATCTTGAGAAGATCA
TTGTGAAGGTACTTTACTGGTTTCGTCTCAAGACTGCTTGTTAGTATGAACAGATGATAC
TGACGATTGTTCCTGGTCTTGAAGCTGAACACCTTATTATTTTGGGAAAACATTGAGCCA
ACCAACCCAGTCTCGTGCTTTACCAATCCAAGCTGAAAGAATGTCCGCACCTCAGCATTG
CTGCTCATGAGCTCAAGACAGATCACCATACACCCTTCGGGTGACTCGTAGGTACCTTTG
GGGTAAAATCTGATGGACCAGTCATACCCACCGACAGTGAAGATGGTTGACCGGACGAAC
TTGTCTACACCCATGTCCTTCTTGAGGCTGTACCCGGCGATCTCAAAGATGTGCGCTCCC
TTCTCCTTGTCCGTGGTGCACCTCGATGCCGTCACCTTCTCCTTGGTGCACCTCGATGCA
GTCTCCTTGGATGCTGACTCCATCCTGTCCACAACCATGATTAATTCCAAGAAGGGATAG
TGCGGACCTGAGCATAAGAGAGGAACATAGACAGCCTTTTTTCTTTAGGAATAACGCTAT
GCATTCGGCATGGCTTTGGTGTATACAAAATTAACCAAAGTTGACACGAATTTAAAAATG
AGAGAACAACTTTTTGTGAAAGCTTCACAAACTAATGAGGGGTTGGGAGCAAGCAGACCA
TATGATGTGTGAAAAGCTGAGAACAGAACAAGCTATACAAGAGCGCACGGGGCAGGACTG
TTATGCACAACAACACAAAAACGAAGCTAGCAAAACGCCAAGTATAACTATTAGCTAGTA
CTAGTAGCTTGGCTAATAATATAAGTTAATAATAACAGATCAAAAGAACACAGCCTCACA
ATCCCCCATGGCCATGGGGCAGGAGCATTACAAGTTTACCCACAATATCACTTGTCACAA
GATTAGAGTTTAGTACTAATTGGGGAAGGTGCATTACAAGTTTACTAGTACAAGTTGAGC
ACAACCCAAGCAGCTTTACAGTCTCAGCCATCTGATGACCCGAACTTCTGAATAAGAACA
CAAAAAAGGAACATGAAAGATGTGGTGCTAGATTTAGAGCCGCAAGTTCCTCCAATTGTA
TTAGTTAATCAAGCACTGCAAGACTAGGAACACAGCACATAATAGCCAACATCAATGGAG
GATTTTACCTGCAGCTTTTGTAGGTTGTGCGGGGAGTTGGGGATGGAGAACGCCGGGAGC
CCTGGACGCGAGGGCGGCGGTCGGTGGCGGAGGCGGCGGAGATCAGACGAGGACTAGGCG
AGTAGGTCACGCGTCTGACGGCTGAGCGGCGCCGGAGCCCGCAGGCGTGGCTGCTCGCAA
TTCGATCCGCTAGGGTTGGGCACTTGGGCTTGCGCGTCTCGCTCGCGTGCGCGCGTCTGT
ACGACCCCGTGACTGTGGCGTTCGTGGGCGTGGAGTGTTTTTTTTTTCTTTGAATGGGGT
GTGGAGTGTGGACTGAAGAGATGCGGGCCAGCGGGGCGCGGATTGCCTGGTTGGCTGGGC
TGTAAGTAGGCTGGGACTTAAATTGGTTGCTTCGGTTTTGCCAAAAAATATTCGTTTGCA
TCCTCAAAAAACTAAAAATCGTTTGCATGCATTTTCTTTTTTGGAACTTGATCGTTTGTA
TGCTGGAAAGCACTAGTCATATAAGGTTTCTTGCTGTAACAAACACAAATCCTATTAACC
GTAAATTCAGGATGTAGGATGGATTCGGTTTTTAAGATACTAGCAAATATGTTCGTGCAT
TGCAACGGGTAATAAAGATTTCTTATGTGAGACACTATCATTTTGATCCAATTCTGATTC
TGAATCATCATATTGATGGTGTGCACCTACGACCATACTCATGCATCATCGATATGGTGT
CGTTCGACACTGAGAAGGTCGCGTTTATAAATTAAGTATATCATAAAAAAACCTATATGT
ATAGCCATCACATGCAATATATGAACACAAATTAAGATTGTACTTATCAATTCAACTGTT
ATTCCAAAAAATCAACTATTAACAATCATTACTATAAGATGAATAGTTTGGATGTTTTTA
AAATAAACCTTCATATACTTGTGATGTTCATCAACTTTATAAGTGCATGTACATAGTATA
AAAGTTGTTTGTGCATTCACTAAAAAATTGTAGTCCGTTGGAAAGTGTGACGCCTTCGGT
TTAATCGTACGCTAATCATACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNCACAACACAACTCTACACACAAATAAAACAACATCAGCTTCATATCACAAGCCAG
GGGTCTCGAGGGCTAGA
