| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location |  |
Predicted Genes from contig_54912
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_68525 |
3 |
3881 bp |
MLOC_68525.2 |
Available |
Available |
LOC_Os02g01740.1, FRAME:+1, EVALUE:0.0, 13102.m00099 protein U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed |
CDS Structure of MLOC_68525
Contig Sequence (8919 bp)
>contig_54912 8919 assembly3_WGSMorex_rbca.fasta
AATATAAGTCTTTTTAGAAATTCCATTATGAACTAGATACTGAGCAAAATGAGTGAACCT
ACGCTCTAAAGTATGTCTATATACATCCGTACGTAGTTCGTAGTGGAATCTCTAAAAAGA
CNNNNATTTAGGAACGGAGGGAGTAGTGTTGAACGGTTGTTGAGCATAAATGATTTCTCC
TGAAAAAAAATCCTGGGTACATTGAAATGATACGTTCATACAATACTGTGTTTTCAATGG
AATGTAGTAATGTCATCCTTGGTCCATTACAGGATACTCTCCCCGTAACAAAATATAAGT
CGTTTTTTGTGCCCTATGCAAAACCAAAAACGTCTTAATCTTATATTTTACAACAGTAGC
ATCATAGTAAAAGGTACTCCCTCCGTTCACTATTATAAGATGTTTTCGATATTTCGGACT
GAAATGAGTGAACAGACACACTAAAACGTGTCTACATACATCTGATTTAGCAAAAAGTTA
GAATATCTTATAATAGTGAACGAAGGGAGAGTGATTTATAATTGGATGCTGCAACTGGGA
ACAGCAAAAAGCGCCTCTGCTTGGGTGGGTTCATATTTTGTTCTGTTGTCTCTTTGGAGC
AGAGTCTTGTCACCAGATGTGTTGTAGAATAGCAAAGAAACTCGGTTAATGGAAGTAGTC
AACTCGCAATCTTGACACTAGTGGAAAGCTGTAGGGAAGTGTCATCCATATATTCGTAAG
GTGTTGTATGCTTGTGATTTAATATTGTTCTCCTGCTCCACTGCTGATTCCTGTATTTCT
GTGCTGCTGCAGGTACACTCAGCTGCAAATCTGTTGGATAGGAACAATTTGATAAAGTAT
GATAAGAGAACTGGATACTTTCAGGCTACTGAGCTGGGGAGGATTTCTAGTTATTACTAT
ATTAGTCACAGGACTATTTCAACTTACAACGAGTACCTGAAGCCTACAATGGGTTATATT
GAGCTGTGCCAATTGTTCTCTCTTAGTGAAGAATTTAAGTATGTTACTGTCAGAAAAGAT
GAGAAGATGGAGCTGGAAAAGCTTTTGGGCCGTGTGCCAATTCCTGTGAAAGAGAGCTTG
GAAGAGCCCAGCACAAAGATCAATGTTCTGCTCCAAGCATATATTTCTGGGCTTAAGCTA
GAGGGTCTCTCCCTTGGCTCTGATATGGTCTATATCAAACAGGTAACATGTTCCCTCTTC
TGAATGCAGCTCCTGATTTGAATTGCTTGCTTATTTAGTTGTCGTTCTTATATATTTATT
TTCCTCTCCATGATGCAGAGTGCTGGTCGCCTCTCAAGAGCAATATTTGAGATAGTTTTG
AAGAGAGGATGGTCTCAACTAGCAGAGAAGGCTCTGAATCTTTGCACGATGATTGATAAG
CAGATGTGGAGCGTCCAAACTCCTTTGCGCCAGTTTCCTGGCATTCCAAATGAAATCCTG
ATGAAACTGGAGAAAAAGGAATTGGCTTGGGAGAGGTACTTTGATCTATCATCACAGGAA
ATTGGTGAGCTGATCCGTTATCCCAAGATGGGGAGACGGTTACACCAGTGCATCCATCAG
TTACCAAAGTTGAACCTTTCAGCCCATGTCCAACCTATTACTAGTACAGTTTTGGGTTTT
GAGCTGACTCTTACACCTGATTTCCAGTGGGATGATAAGATACATGGATATGTTGAACCT
TTTTGGATTCTAGTTGAGGACAATGACAGCGAGTGCATTCTTCACCATGAATACTTCATG
CTTAAGAAACAATGGCTAAATGAAGATCATACACTCACCTTCATAGTGCCAATATTTGAG
CCACTGCCCCCTCTGTACTTCATACATGTCGTATCTGACAAGTGGCTTGGATCTCGGACA
ATTCTTCCAGTCTCATTCAGACACCTGGTTCTTCCAGAAAAACATGCTCCACCGACCGAA
CTGCTTGATCTGCAACCACTACCTGTTACCGCACTAAGGAATGCACGATATGAAGGCCTT
TATAGTGGCTGGAAACATTTCAACCCCATTCAGACTCAAGTGTTCAATGTCTTGTATAAT
AGTGATGATAGTGTCTTGGTTGCTGCGCCAACAGGCAGTGGGAAGACCATATGTGCAGAG
TTTGCTATACTAAGGAACCATCAAAAAGCAGTATCTGGTGAAACCAACATGCGAATTGTG
TATATAGCACCTATTGAAGCTCTGGCGAAAGAAAGGTACAGGGACTGGAAGATGAAATTT
GGAGAATTGGCCTGTGTAGTTGAGCTAACCGGTGAAACTGCACCTGATTTGAAGCTTCTT
GATAAAGGGGAGATTATTATTAGCACTCCTGAGAAGTGGGATGCACTCTCACGCCGGTGG
AAACAGAGGAAACACATCCAACAGGTCAGCTTATTCATCGTAGATGAGCTTCACCTAATT
GGATCTGAGAAGGGACATGTTTTGGATATCGTTGTTTCAAGGATGAGGCGTATTGCAAAT
CATATCTGCAGCAACATCCGGATAGTAGCGCTTTCAGCATCACTCGCGAATGCTAAAGAT
CTCGGGGAGTGGATTGGTGCCACCTCTCATGGCCTTTTCAATTTCCCTCCAGCAGTGAGG
CCGGTACCTTTAGAAATACACATTCAGGGTGTGGATATAGCAAACTTTGAGGCAAGGACG
CAAGCAATGGCAAAGCCTACGTACAATGCTATCAGACAACATGCAAAACATGGCAAGCCA
GCCGTGGTATTCGTACCGACAGTTAAGCATGCAAGGTTTACTGCGTTGGACTTGTGCGCA
TACTCAAAGTCTGAAGATTGTGGAACTCCTTTCCTTCTTGGGTCAGAAGATGAGATGGAT
ACGTACACGACAGGTGTCAATGAAGAAACACTTGTGAATACGCTGAAATGTGGTGTAGGC
TACTTGCATGATGCTCTATGTGATCTTGATCAGGAAGTTGTGACTCAGCTCTTTCTTTGT
GGGAAGATCCAAGTGTGTGTCGTGAGCAGCACAATGTGCTGGGGAAGATCACTGCCTTCC
CATTTGGTCGTTGTGATGGGAACACAGTATTCTGATGGCAGGGGCGGTGTTACTGATTAT
CCATTCACTGATCTGCTACAAATGACGGGTCATGCCAGCAGGCCTCTTCAAGATAACGCA
GGGAAATGTGTTATATTTTGCCATGCACCTCGCAAGGAATACTACAGGAAGTTCCTTTCT
GAGGCCTTCCCTGTTGAGAGCCATCTTCACCATAATTTGCATGATCATATGAATGGTCAA
GTTGTTTGTGGTGTTGTACAAAACAAGCAAGCTGCCGTGGATTATCTTACTTGGACTTTC
ATGTACCGGAGGCTGACCAAGAACCCTAACTACTACAATCTGCAGGGAACAGGTCACAGG
CATGTGTCTGATCATCTTTCTGAGCTAGTGGAGACAGTATTAGACGACCTTGAGTCAAGC
AAGTGTGTGGTTATAGAGGAGGATACGTATCTGAAGCCCCTCAACCTTGGTCTCATAGCC
TCGTACTACTACATCAGCTACAAGACTATCGAACGGTTCAGTTTGATGCTAACCCGGAAG
ACTAAGATGAAAGGTCTCCTGGAGATTCTAGCTTCTGCATCAGAATATGCAGAGCTTTCA
AGTTGCCGAGGTGAGGAAGAATCCATTGAGAGGCTAGTTCGGCACCAGAGATTTTGTGCT
GAGAATTCTAAGAATCATGATGTACACGTCAAAGCGAACGCGCTGCTGCAAGCACATTTC
TCAAGGCAGGTGGTTGTAGGGAACCTGGCAGCTGACCAACGGGAGATGCTCGTTCCTGCA
CCTAGATTGATCAAGTCATTGGTTGATGTTATCTCCAGCAATGGATGGCTCAGCCTGGCT
CTTAATGCAATGGAGCTTAGTCAGATGGTGACACAAGGCATGTGGGATCGTGATTCTGTG
CTGTTTCAGCTCCCCCACTTCACCAAGGAGTTAACTGGGAGATGCCAGGAAAATGGCATC
GAGAGCATCTTTGATCTTGCTGACATGAGTGCAGACAAGATGCAGAATCTGCTGCAGTTA
ACAAACTCTCAGTTCAAGGACATCATCGGATTCATCAAACGGTTCCCGAACATCGAGATT
GCATATGAAGTCCGTGAAGGTGATTATGTAAGGCCCGGTGGCAAGGTAAGTTTGCAGGTT
ACTCTAGAGCGTGACATGATAAACTTGCCATCTGAGGTTGGGCCAGTTCATGCCCCGAGG
TATCCTAAGCCCAGGCAGGAAGGATGGTGGCTCGTGATTGGTGATAGCTCCAGCGACCAG
TTGCTGGCAATCAAGTGGGTTGCACTGCAGCAGAGGGCCTGCCTGATGCTCGAGTTCATC
GCTCCTGCAGAAGCAGGGAAGAAGGATTACATGGTTTTCTTGATGTCAGATTCCTATTTG
GGCTGTGATCAGGAATACGAGTTCACTGTGAATGTGAAGGATGCTGGAGGGGATTGATCC
GAAGAGAAGCAGTTGCTCAGGTAACGTCTGATGATGAGTTTCTTGTATACACTGCTATTC
CTGGAGAATGCAAGCCCCCCAGATCTATATTCTTGCATGTCATGGTGTTGCTTCTTGGTT
TGTTAGGGTTGTCTGTGACATGAAGTGGATATACTAGAACAGATTTATGAATGTTAAGCT
TGAATGCTTTTTTTTTTTGAACTGTTAAAACTTGAATGATAGTGCATGGATAATGTTCTG
GCGCTGTTGGATGAGCAATGTATGTGTTTGATATAACTCTCCGAACGAACAGGCCCTGTG
AATTGTATAACTAGGGTCTACAGGCAGTGTCAAAACTTGCTCATATGCTACGGCTTGATG
CTCTCTTAATTTGAACAGGGTAACGAGGATCTGAGGCACAGCGGGTGTATAAAATAGTGA
TGAACTACCGTACTCCCTTCGAATACTAGATACATTCATTCCTAGACAAACCTAAGACAA
GAATTTTGGGACGGAGGGAGTATTAGTTAAGTGGTCACCTGTTTTTCTTTTTCTGAAAGT
TGCCAACTATTTTTTTTCTCCGAAAGTAGTCACCTCTTTGTTTTGGATATATAGCAGAAT
GCACAGAGTGTGGAGTCAAGTCAGCAGTCGAAGTGGGAGTGCCACTGGTACAATAACCGT
TTTGTTTTTCTAGTGTCCGAGTTGGAGAAGAAAGCCGCAGCACACAGGGCGTTGAGACGG
GGGCACCTGGAGAGGCGATCTACGAGTCTCCTACGGAAGGCGACGGGAATCGGCTGATTC
CTCCAACCATCCGTTTGGCCAGCGACCAGGGAGGGGAGATCGGGGGGAAGATCCATGATC
TCCCGTCGGGGCGAAGGGAAGTTGAACCCTCTTGCCATTCGTTCGATCGACGTGATCGGG
GGGACGAGCCGAGATCATTCGGCAGGCGGCCTTTCCATTGTCATCGGGAGCTACGACAAG
GAAGGAGCCGACGGCGCCTCTTCGCCAACTCATCTGAAATAGGCAGCCTCTTGGCCTTCC
CATTCTCATCGGGAGCGACGACAAGGAAGGAGCCGACGGCGCCTCTTCGCCAACTCATCT
GAAATGGGCAGCCTCTTTTGAGGATACCACGACTGCTTCCCGAGTGCAGCGATTTGGCTC
CCTGCACCTACATGAGGTATCTCGTTGGATTACTATTAGGGATGTAGACAATGACATCTT
GGCAGGTCGATATCTCCAAGAATCTGAAATCCCGAAGATTGGACAATGCTTGGAGATAGA
TGGGATTCAATGCATTGTTGGTGACTTGTTCTATGAACAACACATCAACAATCAGAAGGA
TAAGGTATGTATTGATCTCACTTCTCGTTCTATACAGCTTGGAGGTCGTTTTTGGGTTCT
TGCGAATCAAGAATCGGATGAAGAAGATGATAGGAGTAATGAGGATCAAGACAATGGTCA
TATAATCCAAGATGTTGCAGAACGGCTGGAGCTGATGAGCTATCGCCATTGTGTTAAGCC
TGTTCGTGGCTTCAGGAACGCATTACCTAAGCAGCGACCTCGTCCTTGGGTCGGGCCTCT
GCCAAAGGTGAACCTTCCTCCGGTTACACTTTTTGATTATTTTTTGCCCGGCGTTTGGTC
GGTGGTTAGGAACAGGAAGTCGTCGAGAGCGGTATCTGCGTTGATCAAGAACGTACCGCC
TCGGACGGGGCCGCCGTTACCGCCTGCTATGGCGCAGAGCAGGGCGTTTCTGGAGTCAGT
TTCTGCCGATGCGGGCTTGGGCGTTGAATCCCATGGAGTGGGCCCGATGACTACTGGGTA
TTTGGCCCAACTGTCTCTATCTGTCAACGTCCAAACCGAGTCTGATAGAAATTCTGAAGG
GTATATGGCCCAGGACTCTGCGCTACAGACTTTGCCGGCTGATTGTTGCGCACGTAAGGA
AGTCCATCACGGGGGTAGATCGACAGCTGATCCTCCTCACGCAGTTTATTCATGCGACCG
ACCGCCAGAACCTAGGGTTCGTCGGCCTACTCGCGGATTCCCCACGTTGGGCTCTGGGAG
AGCCGCTCGGGTGCCACCTCCTCCCGGCTACAGCTCGCAGGCTATGGTGGACAGGGGCAA
TAGCAAGCAGCAGCCTGCTCAACCTCCTGCACGTCCATCGCCGCAGGGGATTAGGTCGGG
CAGCAACTCGTCGGCCCCTGTAGCCGCTCAGGTGGGGCGATCCACCAGCGCCTCCGTGCA
GGTAGGGAGACCGCCAGGTGCAGTTGGGCAGGAGGGTGATTCTGCCAATGCACATGCTAA
TCGCCTACAGCCGCGTGGGTGGTGGGGTGATGATGGCGTCAATGCGTATGGAGATGGGCA
ACATCGTGGTTCTTCGTCCTCTGGAGGGGGGCGCGGTTATGCATGGAAAAATAATGGTGC
TACTGGTAATGGTTTTGTTGCACCTCCGGGCAAGTTTGTGCTGGGATCCTCGGGGCCTAC
TCACCCAAAGAGAGGAGGATTTCGACAGAATTGGGGTGGCACAGGGGGGGGGGAAAGAAA
GCCCAGGCCTCCTATGCCTCCTCAGGAGTCGCCGGCAGAGGTTGAGGAGACTACTTTGCC
GACTGCGAAGGAACCAGTTAAGGAGAAGTTGGATCCTACTCTCGTTGATCCGAGCATCGC
GATCGTCAAGGGAGACGGAGGTGATAGACCCTCCAAGTGGGCACGTAAGAAAGAAAAGAT
GATTTGCTATCGATGCAGTGAGACCGGGCACTTTGTTTCTGAATGTAAGGCCGAGCTTTG
TGTGTATTGCTTGAAGCCTACACATGGTTCAACTAAGTGTCCTCTTACACTTGGGCCTAT
GCCGGTGGTGACCATTTATGGTGTTTCGAGTCACGAACTAATGTTCTTTGAGTCACCGGC
TGTTACGGCAACGTTTCATGCACCAGATGTTGGGTACACGGGCACAATGACGGCGACTAG
GGGAGTTTGACGGTGGAGCAGGTGGTGCATCAGCTAAAGGAGCTCGTTTCTGCAACTTTC
AGATGGGAACCAATCTTGATCTCAGATAACGTTTTTAAGGTTGTTTTCCCTACTAAGGAG
GATCTAGCTCGCTTGCTTAAGTTTGGTATGTGCAGAGTTGCTAGCACAAGCTGTGTCCTT
GAGTTTGACGCCTGGAAGTCTGAGGAGCCTAAGGGTGTGCCTCTCCCACAGATTTGGGTG
CACTTTGCAGGTGCCCCGTCCAGGGCTATTAATGATTTTCGGGTTACATGGAGTTTGGGC
TCGCTAATTGGTAAAACTGAGGAAGTGGACATGGGGTTCACGAGAGCCAAAGGCGTGGTC
CGGATGTTGGTTAGTCTGCTTGACATTGAGCTAGTTCCAGATGAGGTCATTTGGACTTTT
GAGGGGATGCGCTATACTATATAGCTGGAGATAGAGAGTCCTAAACTGTTTGATGTCACA
GATATGGATAAGGATACCCAAATGGCTGATGGTGATGATGCTGGGGGTGCCAAGGATGAT
GCTCATGAAAAGGCTCCTGGACTTAATTTCTCTTCTCAGCAGAATTCGCAACCATAGAGC
CATCAGCCTTCGCCTAACTCAGGAGCTGGTGCAAAACAGGTGTCTGCAAGCTCTCTACAG
CTGCGGGTTGGTTCTTTCGAACCAGCTTCTGCACCGCCAAAAGTTGGTGGAGGGTCTCGG
TCGATGCGATTTTTGGGGAAGAACCCCACGAGCAGCAAAGGCTATGTGCAGTCTAAGGAT
GTCTTGCAGCCGGTTTCTCTGCAGGAGTTTTTGGCGGAAGCCAAGTCAGCTAGTATCCTC
GATTGTGCACCACCATCGGCTCTTACTGCCGGGATCGACGGCATTGAGTCTGTCCTGATG
GATGCTGCTACTGTTGATGGATGCGCAGTGGAGGGCAACGGGGATTCTGTGCAGCTTGCT
AGGCCAAGGGCCATCGGGACAGACCGAGACCGTGCTGGCCTACTCGCGATAGATGGAATC
TTACCATCAGCAACAACACATGATTCGTTGGCTGGTTGGGGAGGCGACACACCTGGCAGT
GGGCGGGATTCGGAAGATGCACCTTGGGGGGGAGGCATGGGCGTGGCAATGAGCTCGGTC
ACGCCGAAGGCAGCAGGAGTGACCGAACCTGTGATTGACCCCTCGGCTGTGTCACTACTA
CCGCCCAAGAAGGGCATGGAGTTTGTTCCTGCGCATGTTCCCACTATAGAGGCGACATCT
ATTCTATTGATGAGGTCATAACATTTGGAGGAGTGACGAACCCGATGGGTCCAGATAGAC
GGGCTAGTCTTCGGGTACAGTCTCAGCCAGATGCGGACGACTTGCAGATTGGACGAGCTA
TGAGGGCGGCTAAAATGAAGGAGGTTCAGAATTCGACAGGTATGTCTATAAATACAGAAC
ACTCCATTCTTCATTTTTCACCGCAAGAAATCATAGATAATGCTTCCTTTGTGGGGGTCA
CACTGGGTAATACTAGCAAGGAAGTCTCCAAATCTATTA
