Contig Data
morexGenes
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Map Locations of contig_54897 (3317 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_54897

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_68511 2 1634 bp MLOC_68511.1 Available Available LOC_Os11g03440.1, FRAME:+2, EVALUE:2e-94, 13111.m00283 protein myb-like DNA-binding domain containing protein, putative, expressed





CDS Structure of MLOC_68511






Contig Sequence (3317 bp)

>contig_54897 3317 assembly3_WGSMorex_rbca.fasta
TCTAATTATATAATTTTTATGTTAAATAATATATTTTATATAAGTTAAATTGACGACCTA
GGTACACGTGCATGCTTTATAAACTGTGACGGAGGTAGTAGTAGCGATTAGCGAGTAACT
CTTGTGGAGGGTGTCCACATGACACAAGAAGGGACGCAGCGGAGGCCACGGGACACCCCA
CAGACCATGTCTTAATCATGTAATTGATCATCTCTTTCCTGGATATTCATGACCATTCTC
TGCCGTACTGCCTGTTGCTTTACCTGATGTGCCACAAGCTAACAGAGCATTTCAAGCGAT
GTTGATGACCAGCCAGAGCAATCATTGTTAATTCTTGTGCAAAATCTATCGGTATCTTTC
GTGAAAGATACTTGCTCAGTTAATACTACCCCCGTATCAAAATATAAGAGGCCTTTTGAC
ACTATGATAGTGTCAAAAAACAGCCTTATATTTTGATACAGAGGGAGTAGCTTTTAAACT
TGGGCAGTTTTCCTTTGGAAGCAGATAATTAAATAATTAACCATGAATGGCTAAAAAGGC
TATGACTTTTGTTTTGTTAATCTGGATTTCTTTTTGCAGTGAATGTGATCATTTTTGTTT
GTTTTTGCAGTGAATGTGATCATCATTTTTTTTTTACAGTGAATGTGATCAGGGACCATC
TGCCGTTGCCGAGACGGACATATCCCCCCTTTCCCTCTCTAGTTTTTTTTCTGCTAACAA
ATTTGGGTAGCATTCATGTCACACCGTACATGACCAGGAAAAGTACAAGTCGTTGCAGAA
TCAACTAGAATCAAGACAAAAACAGGAGGCTTCACTGACTTATGTTCATACTACGTACAA
TTCAACAACGGGTAAGCTAAGCCGAAACACTTCAGCTAGCAAGTGTACATATCACCCAGA
AACAAAAATAAATTTCGCCACAAAAAACTATATTCAAGAACAGACATGACAACCCTTAGC
CGCATCATGCTTGCAGATCATACGTAACGTCTCGCCTGTTATTTATTTCCTGTTACTGTC
TTGTTCCTTCTGGCAACAACCTGGCTTTCTTCTCATCATCCCATCCCATGCACCATTAGT
AATCGTCTCTCTGAATAACTACTTAGTCTCTCTTCCAGGGAGTGTTCTCTCTGGTAATTT
GATGGTGTCATCGGAGCGATCTCCAAGAAGCTAGCTAGAACATGTAACTAAACAGAAATT
ACTTAACCTGTCTATTATATATAGATGTGTATGCATGTAATTAACTACAGTATGTATTTG
GGAAAGTGGCATGGTTCGTTGGTTTGCCTTTTCCAGCTAGTACCACAGTAGTACGTACTG
GCTAGTATAGCAATGGCAGGGAGGAGCAGTCACCGTCGGAGAGCTCCATCAGGTCAGCGA
CCTGCTCCGCCGCCTCGTCGAGAAGCCACTTCTCGATCGAACACAGTGGCAACTGATGTT
GGAGCTGCTGCTGCTGTCCCGTGGCCTCATCATCATAGATCATGCCCCCCATTAACACCG
GCATCTGCTGCTGCTGCTGCTGAACGCCAGGGACGAAAGCCAGCCCCGCGCCGGCGCCGG
TCATGCGGTCGAAGGACATGAAAGGGTCGCTGAACACGGCTATGTTGGGTTTGACGTCGG
TGGCGGTGGGCGGGGAGCTCTTCATGAAACCGTCGAGGAGCCTGGATATGTTGTCCATGC
TGGAGGCGTAGGAAGACGAGGAGCAGTCGGTGGCGACGTCGGCGAATGGCGAGCGGCGCA
TGGTGATCGTCGTGTGCTGCTGGGTGACCTCCGGGTTGCTGCACGCCGCGTAGCAGCCGT
GGTCCACCGTGGAGCTGGAGGCGGCGATCGCGTCATGATGGTATCGGTGGTGGTGGTGGT
CTAGATGGACGGCTGCGGGGAGGTTGGCGGCTGTCTCGGCGGAGCTGGAGGGCGGTGGCG
GCGGCGCGAAGATGGCGCCCAGGGCCTGCTGCTTCTTGAGCTTCTTCTTGAGGTGCGTGT
TCCAGTAGTTCTTGATGTCGTTGTCCGTCCTCTGTGGCAGGTAAGACGCGATCGCGGCCC
ATCTGCATTCCCCACAATGCAAAGAGTTGTAGTTAGATCATGCATGTATAATATCGCCAT
GCACGGGCAGCTCGACGACCGCTGGCTGGCTGGGTGGCTTAGTTGGTTACCTGTTGCCAA
GGAGGGACTGGAGGTGGACGATGATGCCTTCCTCGTGCGTGGTGAAGTTGCCGCGGCGGA
TGCCGGGGCGGAGGTAGTTGGTCCAGCGGAGGCGGCAGCTCTTGCTGCAGCGCATGAGGC
CGGTGTTGATGGGCACCGCCCGCCAGTTCCCCGGGCCGTTCTCCTGGATGTAGGACACCA
GGATGATGTCCTCCTCCGGCGTCCACGGCCCCTTCTTCACGCCCACCTTGTCGCAGCACG
GCGGCCTCCCCATGATCGACCGGTCGCGCGCCCCCTTCCTCCTCTCGATCTCTTCTTCTC
CTTCTGGCAGCTCGATCGTCTTTCTCGCTCGTGCCTGCAGGCTGCAGCTGGCTTCTGGCA
GCACACTGTCTGATGATCTCTCTCTCTCTCTCTCTCTCTCCGTATATATAGGAGGGAGAT
GAAGGGGAGTGAGCTCCTTTTCACTTGCTATCTATCGTCTAACTCTATAGCTCTCTGATG
CTGCCGCTAGCTGATGATTTACTTTCACTTTCTATAGCTCCAGTCGATCTACATGCAATG
CTTGCTTTCCCTTTCTGTCAACGACATCACATGAATCATAGAAACCGACCCGCCCCACCA
CGCCTTAAAGGAAGGACGAGCTAGAGGTGTACGTACTGCTGCATCCTAGCGCTACCGTGT
GGGATTTAAATTGGATCCTTGGCTAGACTTCTCACTTCTGCATGCAAGCCACCACACCTA
TGACTCGTCAAGCCTGCTTACCATAACTAGTCAAGGCATTTCGCTCCGTGCCGTGGTACT
ATATGTACTGTATGTAGGAAACAAAACGGTAAAGTGTATACCTAAATTTCGTTACCTACG
CCATGGTGAGTCTTATCCACAAGGAATCCGCTGCAACAACTATGAAGAAATTTAGGCCTA
TTAACCCGGAAATTGCTTTTGGCTCCCGAGCTCCATGAAGGCCTTTAAATTTAAAATTCA
AATTTTATGAAAATTTGTATTTTTATATTTCAAAAAATTCTGAACAAAATACAGGGATAA
TTGAAGGCGTAACACACATGTGTGTAAATTTTCAGAAAAAATACAATGAAATGAGGGCTG
TGCAAAAAAGACAAATCTGAGGCTTTTTTACACATGACACTATTCATCGTTTCAGGTCAT
GAATTTGTCTTTTTTGT