Map Locations of contig_54866 (3662 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_54866

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_68491 1 435 bp None Available Available None
MLOC_68490 2 467 bp AK250764.1 Not available Available None





CDS Structure of MLOC_68491






CDS Structure of MLOC_68490






Contig Sequence (3662 bp)

>contig_54866 3662 assembly3_WGSMorex_rbca.fasta
GGTCATGAGATTGCTGAGTCCTTGGGGCTCACAGTATACTACAACCACCCACAGGTACAG
GTGAAGCAGAGGCAGTTCCGATCGATCCTTACGAGCTCAAGTGGGAGTTTGACGAGGAAA
GAGGTCGGATGTACGTGAGAACTAGAGGCCTTTGTCGTGATCATGGAACTAGCATGCAGG
ATATCATAGCTTTTGTCGTTTATCTTGTCTGTAGTCGGACCCTATCTTGTTTTGAATAAA
TGTATGGCTGTATGGATATGTATCTTATCAAGTGGCGAGTGAATGCCCTATTTATCATTC
TTTCAGTTATTTTGTATCGCTATGATTATCTTGCTTGTCAAACGCGTAGATGCGCCTCTT
TCCCATTTTGAGGCCTCACCCTCAAATAAGGAAAGGGCTGCATATTAGTTGTAACACCGG
CGAGGTGGTGCCGGGCGGGGCAGGGGCGCCTATGGATGGGAGGGGTGGTCGCGGGGAGGG
GTGGCCACGGGGAGAATGGCCGACGCGGGGAGGAGGTCAGACGAGGGGTGGCCGACCGTG
GGGATATGCGATTGTGGTGGAGGAGAAGGGGATCCACGGTGATGAGGGAGTCATCGTGCG
ATGTGTGTGGGTGGAGAGAGGGGGAGATGGAGAGAGAAAGGGGTGGGGCCGGGGGGAAAC
ATCTGTTAGAGGAACTGCTCTTTTTGTCGTACGCTAGCGGACGACAAAGGATGCCCTCTT
TTTTGCCGTTTGTCGGCCTGTTCTTTGCAGTTAGGTGGCAGACGACAAAGAACTGGCTGA
TGGCAAACGTAATCTTTGCCATCAAGTTGTTCTTTGTCGTCTGCCTTTCGGGTCTTTATC
GTTGGCAGGCTGATGGCAAAGAACTGGCAGATGGCAAAAATAAACTCCTTTTCGGGTCTG
CCTTTCGGGTCTTTATCTTTGCCATGAGCTAGTTCTTTGCCGTCAGTTTTCTAGAAGCTG
ATGGCAAAGACCTTCTTTGTCGTTCGCTGGCAGACGACAACGAAATGGTGATGGCAAATC
CTCTGATTCCAGTAGTGAACACGAGATCCGACTAGGTTTGGCATTCACCCTAGGCAATGG
ACAGGGGACCCAGTTCTGGTTGGACCCTTGGGTTCAGGATAATCCTCTCTGTAAGATGTT
CCCTTGGCTATTTGTTATTTGTGCCGACTCCTCTCTTCGGGTCTCGGATGCGATACAGGG
AGGCCAATGGAACATCTTGTTCCACTGCTCTCTGAGTCCCGCAGAAGTACTTGAATGGAT
CGATCTTTTGGCCACCCTTCCGCCTGTCATCAGGAGTGCCCAGGATCGGGCCCGTTGGCT
CCTCTCTCCTTCGAAAGACTTCTCTGTGGCTTCGGCGTACTGTGCCCTATGTCGTACTCC
TACCATCCAGTGGATCGCGCCCCTGTGGAAGGCGCCACTACCACTGAAAATCAAGATCTT
CGTTTGGCAGCTGCTGAGGGATCGCCTCCCATCCGGTACGGAGATGATCAAGCGGCATGG
CCCGGGTAATGGGCTATGTCCCTTGTGTCATGTCGCGGAAAACGAGACTCGCATCTTCTT
CTCATGTACGGCTGATAGGTCTCTTTGGATGTTTGTTCGGGACACACTTGGACCAGTGTG
GACGGCCTCTAACTTGGCTGAGTTCTTGCAGGACAAGGCAATGCAGTCGAGCAGTAGTAA
GCACCTTTTCTAGCTGATCTTCGATGCGATGTCATGGACCCTGACTACGAGGAATAAGAT
GGTGATTGATGGGATTTTCTTGCGGCGCACGTCTGATGCTTTTTTTTCAAATTTCTCGCT
TTTCTGCAGCACTGGCACCCGTTGGCTAGCCCAAGGGATCAGGCGCGCCTTGGACGGATG
TTGGATGCTCTTCACATCTCAGCTCGCCATCTTGCCCACCGGCCTTCGACTGGATGATAT
GACCACTTGGTGATCTTTTTTTCATTTCCTCTTTTTTTTTGGGTTTGCTTGTGCTGTGGA
CCCGGCAGACAGTGAATTTTATATTGGTACCTCTAGTTGTAGACTTGGTGCTTTACTTAT
AAGGCTTGTTTGGTTTGAGTCTGATCCACGTGTATTAGCTGGATTTTCCTCGTGATCCAC
ATGTGTCAGCCCAGACGTGGATTAGTTTCCTAACGAGGCCCAAAAAATCATTTGATTTAG
TCTAGATGTGGATCTTCCACGCCTCAATCCACATGCTTCCACTTCAATCCATGAGGTAAA
AAATCCGCCCCCCTATGAATCAATTCCACTAGGGGATTGATTCCCTAAAAACCAAACAAG
GCTTAAAGCGGGACAAAAACCTATTTCAAGAGACATTATTTGTTGATTATACGGGAGTGC
GAGTCAAACAGCACGGTTGCACGTCACGCGCTTCAAGGCAAAGCAATGGACGCGCCCTCT
ATTTCTCTCGCCATTACCTTTCTCAGCTCTGGTGGAGCCCGCTGGAGGGGAAAGTGCGTA
ATTGTTTAACCTCTGGCAGCTCCACCAAACTTCACTAGCAGCTGCTTGCCCACCTTTCCT
TTTCTTCTTGTTCTTCATCTTCTTCCTCCTCCCCTGCTCTGGTCACTTATTTGGTGGGAG
CGAGCTCGCATTGCCTCCTCTTGCTGCAGTCCTTCGAGGGCCATGTCTACAATGAAGGGC
GTCGACGACGAGTTCCTCGGCGTCGGCGACAAGCCGTACGTCCCCTCTCCTGCTCCCTAA
CCCCTCACCTCTTTGCTGTTCCTTTTCTTGCTCTTCAGTTGCTCTCTCGGACTAGATTCC
TGGCAAAGCTTGGATCAGCATTTGAATATGCCTCCCTGATTCCTTCTCTTTCCCCCTCTC
ATCTAATTTTACCCTTCCGCTTCCGAAAATGCCACCGTTAAGTGGGGCAGGGGGGAAACC
CCTTTCTATTCAGAAATAAATAAAAAATGCCACCGTTAATTTTGTGTTCTTTACCGAGGA
GCAGCACTACTGCAATTACACTGCGCTTCTTAAGATTTGTATAAGAAAAGATAATTGCTT
GGAACTCCCAAATCAGGGAAGGAACCTGGAAAATAATTTCTTGGCTTAAGAAATTCTGAG
TACATTTTGCCAATACTATTCTTCATTTTACCTCAGTGCTGTAAGTGTTAGGCAGATAAA
ATCTAGCCTAGGCTGTAAATGTTAGGCAGTATAAACATTTTTTTTATTATAATTTTAACT
TCAAATCAATATAATGTTCCAGAGGGCTGGACATCTGGTGTATTATGGGCACCAATGTAG
TTCCAATTGCAAAATCCTTGCATGGCAAGTTCTACACTGGGAACTGCTATATCATACTCC
ATGTAAGTCCTTCTCCAGGGTAGGCTGCTTCAGCTGTAAAATCGTACTGTACATTTTATT
AGCCTATTTACATCACTGAGTAATTTCAAATGTTGTACAATGTGTCAGACAGCTGAAGTC
AAGAGCGGAACTCGAGGGCATAATGTGCATTACTGGATAGGGGAGGGCATAATGTGCATT
ACAATGGTGTGTGTGTTACGCACATCATTTAATTGGGCTCTCTTGTCACTCTTTTCTTAA
CTTAGGACTTACTTTGTGTCCTGCTGTCCATCCTACATTGCGGTGACCTAGGAAGATTGT
TTGATGGCCTCTGACAAGGCCGTCAAGTTGGATGCAGCGCTGGGCTCTCACGCGATCCAG
TA