morexGenes - Barley RNA-seq Database

Contig contig_54789

Source Contig contig_54789

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_54789 (1961 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012

Predicted Genes from contig_54789

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_68438	1	292 bp	AK364124	Available	Available	None
MLOC_68439	1	252 bp	MLOC_68439.1	Available	Available	None

CDS Structure of MLOC_68438

CDS Structure of MLOC_68439

Contig Sequence (1961 bp)

>contig_54789 1961 assembly3_WGSMorex_rbca.fasta
CTTCCCTCCCGCGCGAGGGTGGAAGAGGAGTGCGGGTTGGGGGGAGTTTTTCGTCCCAAC
CCTCACTTCTACAGGTTGGAAAAATGTTTGAGGGTTGGACCTCTAATTTTTTTTACGGGT
TTGAGGGGTTAGGGGTTCTAGTCTACGGTTTTTTAAACAAAAACTGTAAAAAAAAACAGT
TATTTTTTAGGGTTTAAGAGTTTAAGGGCTCTACTAGACTTGCTCTTAGCCTGCCCCACC
CCCACCGGTGGATAACCAAAAATACAAGCCAGGAAGCCGCCCACTAAACTAATTAATTTA
TCATTCACTGGTCATGATCAGTTTTGTTATCTTGAAATATAGCCATGCCACTGGAGTACA
GCTATACGGGCACAAATGCTGGTCAGGACAAAAAGAGGCCAGACCAGGGACAGTTCCAGC
CGCTGCTTTTCTTTCTCTTTCTCTTGCAGCAAAATGCAGCATGCCCACGTTCAAACGGGG
ATTAGCTAATTAATTCATATACACGCGAACCTCTGCCGCGAAAAGGAACGGCTCTCCGGG
CCTCCGTCGCATGAAAAATGTCCGTCGCCTGTCCTCCACAGGTTCGGGGCCGGTCAAAAC
GGTGCGCAATATAGAGTGTGATTCCACGAACCCGGCATCAATTTTGAGCACCGAAAAAAC
ATGGTGCTGCAGCCATAAAGAATTCGTGATACGACGACGGAGAGGGAGAGCCATCGAACG
CACGTAAGATCGGCGGGCCACTTTACGAATCCATGCTAGTGGGCGGGAGAGATGCATTGC
TAGAACGGAAAAAAGGATGGACGAAAGCCAGCCTGAAATGCCAGCGCCGCACGTACAGCC
TCCATCCACTATATAAAAGAGCCGGCCGGCCGATGCAGACGAAGCACCACCACCGCAGCA
GCAAGCCAGCAACGAGCGATCAGCCCTCGCCGTTCCCTCTCGACCGGCCGTGCTTGCCTC
CGGTGCTGCGCCCTGCTTGGTCGAGTCGAGGAGCTCCCTGCAGAGAAAGGTAACTGATTT
AACTCGAAGCGCACGCACCAGGGTCGAGCGAGCTAGAGAGTTCGTTGCTCACGCTGCTGC
GATCTTAGTCATATCTAGCTATCGTTGGTGCATCGTGCTAGAGCACTGTGGAGAGGTACG
TAGGTAGGAGTACCATTGACTGGCTCAAAAAGCTTAGGGTGGTGGACCTAAGCATGATCG
TTGGTCAGCTGTAAGCAATTGGCATGTGTCTGCTCTGTTGACTGTTGTGCCAATGAGGTA
GGGCAAAAGGTGATGGTTGGCTCCTTCTCGGAAGACTACGTACCCGTCATGGCCACCACC
ACCATGCGTCCATGCCATAGCAAATGAGATTATATCACATGCGTCAACTTAGTTTCCAAA
GATGATTTGGATTTCCAGCCCGAGCACTAGCGGCAGCTTCCCGCGTCCACCGCGCAGCGG
CGGCCCCAGGCCGAGTCCGGCCGGCCGGCACCCACTTTGCTCAGTGCGCAGGCTCGTCCT
ATAAATTGCACCCGTAGCCTCGGTGCCCAGAGCCAGACCAGGTACCCACCACCACCTCGC
GCTCGCTCGGCAGCAGATATTTACTCAGTCTCTGGTGCACTGCACAAGATCGCACCTCTA
GCGTGCACCTCTAGCGTGCAGAGTGCACTACACTTACTGTGGTCTCGCCTCCTGTTAACT
AGTTCTTGTTGGCAGCAATTAAGCTTAGAGAGAGGTCGATCGGGATGGCGGACAAGGTCG
TGGCCACCTATTACTACCCGCCGATGGAGGTGGCCGCCGCCGAGCTCGGCCAGACCGCCG
GCTCCAAGCTCGACGACGACGGCCGCAACAAGCGCACCGGTACGTAAAACCCCTTTCTCG
TCTCATCCCACGGTGTACGTACGTACATACCTACCCTACTTAATTGTTGGTCTCTCTGAC
GTGAGTACGTGTTGATGTGTGCAGGCACGATGTGGACGGCG