Contig Data
morexGenes
Links



Map Locations of contig_54771 (5142 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_54771

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_68425 1 535 bp None Available Available None
MLOC_68426 1 660 bp AK250258.1 Available Available None





CDS Structure of MLOC_68425






CDS Structure of MLOC_68426






Contig Sequence (5142 bp)

>contig_54771 5142 assembly3_WGSMorex_rbca.fasta
CGGGAACCTCGTCATAAACGAGGGCCGCCACGACCCTTCCCCTCCCCGCGGCCACCTTCG
CCTGGTCAAGCCGAAGAAGGAGCCGGCAACGCCCGTGGTCAAGCAGGAGCACGTGGAGAT
GGTCGCCCACCTCGACGCCGGCCTCATATGGTCGCGTGACCACTACGTGAGGGAGGAGAT
GGAGCGCCAGTGCCACGCTCTCGCTCTGAAGGAAATCGCCGAGTGTCGCCGCGGCCGCGA
GGAGGGCGGCGTCATCGTCCTCTCCGATAGTGACGAGGAGGCGACTGCGCCGACCAAGCC
CGTCAGCAGCGGCGATCCAGGGTAGGGCTGCAGCAAGGACGACGGCGTGGAGGACGAGCC
ACCGAGCGACGACTACACCGTCTTCTACAACCTCCTCGGCATGAACTAGGCTCGGGGCGG
TGACGACGACATAGTATTTTCAGGCTTTTATGTATGTTTTTAAATTTGTATAAATATGAA
TGGAACCACCTATATTTCGTCCAAAATTGTGTAATTTTTGGCGAGTGCGTGCCGAATTTG
CATTTGAAATCTGCGGCTGGGGGGCAAACTTTGGGCAGAGGCTGGGAACCCAAGCCCCCC
CGGCGAAAATATCGCCGGTTAGCCCCCAGGAGGTGCTATTTCAAGCCCCTGGGGAGGCGA
ACAACTGGAGATGCTCTAACCATATTGACTCATGTTACATGTTCATGGAGTTCAAAAATA
TACTTTTAACTCTGCTCGCATATTGCAATCTACTCCCTCCGTTCCTANNNNNNNNNNNNT
TTAGAGGTTCCACTAGTGGACTACATNNNNNNNNNNNNNNNNNNNNNNNNNAGTGTAGAT
TCATTCATTTTACTCCGTATGTAGGCCCCTAATGAAATCTCTTAAAAGACNNNNATTTAG
GAACGGAGGGAGTATTAGTTGATGCATCGACTTGTGTTTGTCGTCACTTTTCACAATGAA
CGTTTGCAGCTACGAGGTCATTTATGCAACACTGCATGATTTAAAGCTGAACCAATCATA
AGAAGGACATGCCTCTGTAAGTTAACATCGGTTTTCCCTTGGGAGGGATACATGCAGAAA
CATGAAATTTAAGTGGTAAAAAGGACCCTAATAGGAATATCAACTGGCAGACTTCGAACA
TACTCTGCAGGTGGTCTTTCAGGCTGAGAAGTCGTAGTTGATGGGACTCTGCAGAAAGAT
GGCGCATACATTTAGTTTGGGCAAAACCCTATGTGCATGCAGTAAAATGCAATGAGGAAC
CCTAGCAAGGGGCTCACTGGGGCTGAGGAGCTTGTGGTTGAGCAACTGGAGGCGCTTGAC
TGGTAACAGGAGTGCTTGAAGGCTAGTAATGGTTCATGTGTCAGTACGGAACGGATACTT
CATATTGTGTTTTCATCCGCAAAAGAAGAATTTTACCTGGGCAGATGAACCTCCACTGGA
AGCAGAAGCTTTACTCTGCAGAAAATAAGTAAATAGCGGTACTTTTAAGAGAAGAAGAAC
AAGGCCGACGAATAATGTGGAAATAGTGATGTAAGTGTCAAGTACTTTCTTTCTGTTGAT
ATAAATGGACATTGTACAGCATAGCTGCTACATAGGAAGGAGCAATATAGATGGACTATG
GCAGGATGCCAGCAAATTAAGTAAGGCGAAAAGGTATTTCAGGCACATTGAACAGTAACA
GTCAAGTGCCATATCTGAATATAATTTTCACATGTAACCACTTATGTTCACTCCTTAATA
ATTCATGATGTTACAATTGTTACACCGAGCATATGACAGAACTGAAATAATCCATACTGT
ATAGGGCATAAGCAGCCTACCTTACTAAGCATGACAACTAGAAATCCAGCTTCGCCAACT
TGATTCTCATCCAATGTGCTTTCATCCTTCAAAACCTTGCCATTGTGAATCAGTAGTTGT
TGACCCCATGGATAACTATCCTTTCCTTGAATCTCTTCAATGTTCTTCTTGACAGCCATA
ATCTGATTTAAAGCAAACAGTTAGCATGATATTGAAATAATTACTCCCACTGACATTTTT
TACTAGTCATAGTTCAAAAGTCTTCGAGATGCTACTTTGACAAAAAATAATACAGCTATA
CATTAAGTATAATACTATGAAAAACAAATTAACAGCAAATCTCATGATATATTTATTACA
TAAACCTATATAGTTTTAAAACTATTGGGGGTCAAACTTAGAGGCCACAGATCCTAGGTC
GCCAAGTTAAAAAGAACACAGATAGAGTATATCACAAAAAATATTCATCTTTGATAAAAG
ACGAGTTTGGAAACAAGTGTACTCCTCATGGCAAAGGGACACTGGTGGGGAAGAACAGTG
GATAACAAGGTGTCCAAAGGACATGATTACTGCAGATGGGAAAGAACAGCAATGACACTC
CTGAAACTCAACCTTGCAACACCAAATTGAACCCTAGATCATGAAGATCACTTTCCAATT
GACGTGGACCTAAATCCTCGCCAACTCCAGCTTTCCATCGTCCCAAAACCACAACCCCCG
GAACAAGCTATTAACACAGCATATCCACAAAATTAAAGTTGCGTATACAGAGAAAGAGCA
TCGTTCGTCTACCAATCATGTCCAATTGGAATACTGCCAAAAATTGTCTGCCAGTATATA
TTTTTAAACAGCCTGCCTACAATAACACGTTCACCATCCTTCATGGAAACTCACACGCAC
TGTTCTTCCCTTAAGAAGATCCCGAGCACTCACAGGTAAATGCGAGGACGCAGTGCAAAC
GGCATTCCAAATCAGGGGCCAACACCTCGGCAAAAAAACCTAATCAGCAATAGCACGCCC
AAATCTAACGAGCTAATCCCTTCCGTATATCAACGCATAACCACATGTCCCTAACATCTA
CTCACCGTCACATCATCTGCATTGATCGAAATGCTAGTAACTCCCAGAAAAAAATCGCTG
TGAAGCTGTGCATCCAGCGAAGAACACGGGCTCTGTTTGAATTGAAAAAAAAATCGGGGA
AATTTGAAACTAAATGAGGGGAGCGGGCCGGGGAATCTCACGGTGTCATTGTGCTGGACC
CGGATCTCGAAGTGGGTGCCCTTGAGAGTCTTCACCGTCAGCTTCATGGCGGCGCCGCGG
TGGTCACGGCCAGGGGATCGGAGTTCCTTCCCTTCCCTTCCCGCTGCTCGCGCTAGGGTT
TTAGCAGGTCATGTGCTATTGACGCAACCCTCCGCAGAAAACGGCTCGAGAAGTTCGCGG
ATCGACTTCGCTGCGCCTCGCCCCCTCCGTCACCGGCTCCGCGCCGCCGCAGTCGCTCGA
TGCGCCGCCGCCTGCTTCGCCTTCGCTACTAGCTGAGTGCCTCGAGTGGCTGGGCCAGTT
CGTGTATGTTTGCGGCGGCTGTCTGCCTGTCTGCACAGCTACGTAGTTAAGATTTTTCTT
CTTTCTTATGGGCCCTGGAAGAGAAACGACCAGCAGAAGCCCAAAGGGGGCATTTGGTAG
GCTGCATAAGGCGGAAAACCCTATTCGATGCTCTTTGCGTCAAATAGTCGGCCAAACGCA
CAGGGGCGCGACCAACTGGACCGGTCTATCTCCTTCTGCAAGTTCATGTTTGAAAATTGT
TCATGAAATTCAGAAAATGTTCTTGCTTTAATAAAAATGTTCTAGATTATAAATAATTAT
CGTTTTTCAAAAAAATATATAAATTTTAAAAAAAATAGGATTTTCAAAAAATGTTCTACG
TTTTCAAAAAAATATTTGCGAATTTCAAAAAATGTTATTGTTTCGGTATTCATTTTTTCC
TTCACTTTCATTCCTTCTTTCCTTTTCCTATTTTTTTGTTTGACATTTTCTAATATATAT
TTTTGAATTTAAAAAAATGTTCTTGTGTTCAAAATTTTGTTCATAATTTTATTTAAATGT
TTGTGCTTCAAAAAATATTCTTGCTTTTAAAATGTGTTATTATTTTCAAGAATGTTCGTG
TTTCAAAAATTGTTCTCGTATTCGAAAAACTGCATGATTTTTCAAAAAATGTTCCTTTTT
TCATAAATTGGTAACAGTTTTTAAAAAATGTTCTTGTTTTCACATTTTTATAAAAATGTT
CCTGATTTATGGAAAATATTTATCTTTTTCCAAATTTGTTCACAAATTGAAAACTTGTTC
AAATTTTGTTCTCGGTTTCAAAATTTCTTATTAATATTCAAAAAATGTTCGTGCTTTAAA
AAATTGTTCGCGCTTTCAAAATTTTCATGATTTCTCAAAATTGTTCTTGGTTTCAAAGTT
TGTTCTCAAAATTGAAAAAATGTTTGTGCTTTAAAAATTTATTCGCCTTCCAAATTTGTT
CGGGTTTTTCAAAATTGTTCTCCGTTTAAAAAATTTGTTCTCAAGATTCAAAAAATGTTC
ACGCTTCCAAATTTGTTTGGGATTTTCAAAATTGTTCCCCCTGCCGCAGCGAGCGGCGTG
TAGGAGTTCCCGCATAAGGCGCAACCAGTCATGCACGGTGTAAAAATCACGTACTCATAG
ACAAGCGTATAGTAGAGTTAAGATATTTCCCTAGAGTTTTCTAGGGTACCCAAACTCGTG
TGGCGATCTAGCCGGTGTTCCACGTAAAAACCACGACAGCGGCGTGGCTTTCTCATATGT
CGACTGAAAAGAATCGAAATGGACCTAAAGAGGGGGTGAATAGGTACAATTACAAAATTT
AATTGTTACTTAGCAATTTTAGGCAAAAGTGTGGAATATGAACTTTACCCTAACAATTGC
ACTAGTGATAAGGTGACAAGTATGATATAGTACAAGTTAAGCACTTAACTAGGTAAACAA
ACCTTAATATGAAAACATGTTAAACAGGTATGGAGACAAGTAACCATAAGTAAGGTGTCA
CGGTTAGGAATAACCGCAACTCTAAAAGACGAGGATGTATCCCGATGTTCACTTCCTTAG
AGGGAAGCTACAAGAGGTGGATGTTACCACAAAGGCACACCAACGCCACGAAGGCTCACC
ATATTCTCTTTTTGAGACAACACCACGAAGGCGTTTCTTAACCACTAGTGGTAGGCCTTG
AGGTGGCCTCCAAACCCTCACACATTTTTCGGGGAAAATCACAATGGTTTGATTCCTCTC
CGAAGAACTCCTATCACCTAGGAGTCTCCAACCTCCAAGTGT