Contig Data
morexGenes
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Map Locations of contig_54755 (4907 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_54755

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_68420 1 384 bp None Available Available None
MLOC_68421 1 1027 bp AK376745 Available Available None





CDS Structure of MLOC_68420






CDS Structure of MLOC_68421






Contig Sequence (4907 bp)

>contig_54755 4907 assembly3_WGSMorex_rbca.fasta
GTATAGCAAAAATTACACGAAGTTATACNNNNNNNNNNNNCGGGGCCCGCCGGCTGTCGA
GTCATGTCCGACGCGGGGCCCGCCGGCCGAGCACCAAAGTGGTCAGTACGCCGTTCGTCA
GGGAGTTGGTAGGCGCAGGCTTTGCTACAAGGCCTCCTCGGCCGGTCAACCTCGGGAGTG
ACCGATGGCCCTGTAGCCTTGCCTTGCTCGCATCATGACCGCTTAGCCTCGCCGGACCTG
TCAATGTGCACTATAGCCATGCGCATCCCTGCGTCATGGGTCTCGTCTTGTCGTCGTATG
CCGGTACGGGCGGATGGGACGGGGCGCTGACCCGCCAGTTGCCGTTAGGGCCAGCCGGAC
GGGCCAGTTGTAGACAGCCGGCCAGCAACACGACGGCCAGACGGGCCACCTATCGCCAGT
CGGCCCCCAAATGTCTTGGAGTGAGGTTTCCTCCACTTTGGTATACCCAGGGGCCATTAC
CCTGTTAGCATATATATATATGCGCGGTAGGATGGAGAGACGTGGACTGGACCCACCTTC
GAGTCGGTTAAAGCCCATGATCCGACGTCTCATATCGTGGTGTGTCTGTTACGGACTCTC
CGTTCCTGACCTGCTAAAAAAGTGCGTAGGTATGAGCTCGGCTCAGCTCAACCCCGCAAC
CTACGGCGCGTCGTGACGTGGCGAGGCGAGCGAGGAGGAGTGCGCAAGGGCCTCTTCTCT
TCTCACTCTCTTACAAGTGCTAGAAGAGCTCACCTTATAAGATGGTGTAACTCTCTCCCA
ACTAGCGGTAAGGGACTAAACTTTAGTCCCACTCACATCACACACACAGCCAAGTCACAT
GGGCCATGAGAAGTTCAGATTTTAGTTAGGCTTTGTGCCAAAGGACTACTAGCAAAAATC
CAACAGTTCTCCCCAACTACAAGTATTTAGGTACAGAGGGAGTAAACGTCTAGTTGAGTG
CACAGAGGTCGAGGAACAGGCACATTACAAAACAACAATATATGTAGGAGTAACAACACA
GTATTGAGCTATTAACTGATTACTCGGAGAGTATAAATAGTAGGATTCAGGATCACCAAT
GATTAATGCGGAGCTAACATTGGACAATTGATCAGCGACTGATTTAAAGCCTATATGCCT
TAAGAATTGTCATGTCACGTACCAATGTCCTGTATTGAAAATAAGAATATTATGGAAGCT
TGGTGCCTCTGCCCATGTTTGGTCGGCAATATCAACATCAATCCTGTGGCCTTGCTTGTA
TCCAAGAGATTCTAGGGAACCTCCGTTTGGACTGGCTGACCAGCTACAGAACCAACAGTA
TGGTTTTAATCAATGATAACCAAATAGATGAGTTACAACATCATCCATGAAAAGATCTAT
GTGTCACCCTCTAATGCACAGAAAAAGGTTAGTGAAACAGTAGACTGTCTAAAATATTAG
GCAAACAAAGCAATTTAAAGGAAAATGGTGAACCTGCAAGAGAAAAGACTATTAATAGTA
ACCTTTTTTTTTTAAATCAGGTAGCAAGAATGGTCTAATGGAAGCATTGCAATACTACCA
AGTTAGAACTAGAGTCCAAAACTGAAAGCAACAATCCACGTTGCGGAATCTTACACAAGT
CATATCAATAGAAGTTACACCCATCTCCGAAGAACTAAATTTTGGTACTAATACAAATGA
CACTCCTTACCTGCCATAGCGTACCAAAAGATTAGTTCTATGGTATGCGAGGGTGAGGTT
GTAGTGTAGGAATGTGAAACCTCGGTCTGCCCCTGCTGGACGCCATTTGCGAACCTCTCC
GCTCACTCCCCTGAGCATGCAGACCAATGAGACAAACATGTTTCGATTCAAAGAATCACC
CACAAATCCTACAACAAAGCATTGAACATATATCAATGTGTAATAGCATATTCAAGGGGT
CACTGAAATAACTGAATACACTACACCTAGACAAACAGATAAATTTGAACCAAGAAGCTG
CATCACTTAAGGAACGCATTGACACAATTTTCTCTTATACCGTTATTATCATTATTATGC
AGCAATAGTCGTAATAACTGACCATGCCCCAACATGACCACACTACAAGATGACATTCGC
ACAGTTATACATATGTAAATTTCAACACATTCAACAGTACAGGAAACAATCACATATCTA
TCCTATCCACATACGATACTACTACCTTAGTTAGTAGACCAAGCAAAGCATCGAGACATC
TCTTGAATGCTGATCTATGACAATGGGCAGTAAGCACTGCAACTATTACCACGTTCTATA
GAGAAGATTTTTTCAAAGACGCCAAAAACTCCAACTCTACAAGGAGGCCACACCAGAAAG
GCTTCACTCTGCACACGGAGTCACATCTCAAGCACTAGCTAGTAAACACAGCGAAATGGG
TAAGTACGAACCAATATTGGTGTTTCTGTGATGCTCTAAGAACCGGAGCGGGTCGAGCCT
GGGGAGTAGCTCGCACCCCGCGGGCTTCCATCGCCAGCGGAGGAGGGCGTGGCCGTTGTG
CTTGCCGTTGGCGATGCAGTTCCACCCCTTGAAGATCTCCTTACACGTGTGGTCGTACCG
GAGGTGGGACTCGGCGGAGGAGTCGGGCACCCATCCGCCGGCGGCGTAGTCGCAGGTCTG
CTGCGACCTGACAGCTGCGTCGCGGAGCGCGGAGATGGAGCGAGATGGGAAGATCAGGAT
TAGGGTCAGTAGAATAAGGGGGAGAAGCAACACGAGAGGGAGGCAGACTTTGCGCCGCCG
CAGGCCGGAGGCCGGGCTCTTCGCCGGCGGCATGGGAGACCCGGTGAGGCGAACGGGATC
GAGTTTTGATTGGGCTTAAGAAAACAGTGGGCCTAAACTAGTCTTAGGGCCAGTTCTTCG
TCACGATTCTCCATAATCTTTTTTTTTTACGATGACGATTCTCCAGAATCTGATTCCGGG
AAACTGCGTGGCCACAGAATCAGTTATCCAGTTTTTCTTTTTTGTGATTCTAATATGTGA
TTGTTGTATAAGTTGTATGATGAAATGACAATAACATTTTTAGATTGAACTGATATTTCT
GATAGTTTTAGGTTTAATATGAATACGAAAACAAGTTGTAAATTTCATAAAGTATTTAAT
ATTACAATATAAATGAAACACAGCAGCATGAAGATCCATCTTCTACAAAATTCACAGCGA
AGTAAACAACAACTTCAGAAACAAGCAAAACAGGCTGCTAGCCACACGCAGCGAACAAGC
AAAATAACATCCTAGTTGTTGGCCACACACAACGAAGTAGCAACAGCGCTAGTGTGTTGC
ATGCCAAAGTGCAGCGGTGGCGTGACTGAAAGGCACACAGTCCGTCCGTCGTAAGGGACC
ATTCGCCGGCGGATCTGACGACGCCACGGCGGGGCATCCGGCTAGCGACGCCCTCTCCTC
CTCCTGCGGGTAGGCGGCTGGTAATCGAGGAAACCCTATCGGGTGGTGGCCGGGGAGTCG
AGCAACAGAGGTCAATCAGATTTGTTTTCGCTCATGAGCTGTTACTTAGCCCGAGTGGCA
TTTTGCATGTAATTCGATGCTCCAATAGGGGTAGAGATCTAAAACAAACCGTTACCTTTT
GAGGGAGTGATCAGAATCGTGAGAATCGTGGTTTTCTCGTGATTATCGTTTGCACTATCG
ATTCTGATGATTCTCGGATGATTTTGAAGAAGCAAATTGAGTTCTTTCGCGATTCTCGAT
TCTCCAAGCGTGATTGTTGAGAATCACCTCAAAAGAACTGGCTCTTAGCCGATGATGGCG
GCGAGTTTGGTTTTGGCTAGGCCTCACTTCACGTGAATCCTATTTGGCGGGAGCCACTAG
TTAGCGAGCACTCCTTCCCAGCAAGCATTACCGTGTGCCGCCACTTGGCGCATTCTCATC
CACCCCCACGTGTCGCGTTTTGGGCGCTTCCTCTGGATTTCGTTTTTTTATTTTTTTTCG
CACGCGCTTTCGGCTTTTTAGATTGGTTTTTTCTGATTTTTTTAGTGTTTTGGTTTTAAC
CGGTCTTTCTTAGGTTTGTCACGATTTTTGTTTTGCGAACAAACGTTTTTTTTGTTTTTT
TTACGAGAGGCATGGTTTTGCCTTCACGAGAGGCACGGTTGTAATGCCCCAAGAGTGTAA
CTTGCCTTATTTGGAACCTCTGTATGTGGGTCCATCTTGTCANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTGTGCTCATGTCTTGTTTCCCTTTGCATGCATTCATCCATTTCAT
TCCTTGCTATTGTTGTGTTGTTGTTTTGTGGGTTCATGGTGTGGTGATGAGGTGTGATGA
TATGTGATGGTATGTGTTGTGTTGATTGTGGGGTGCACTTGTAAATTTTCAAATAGGATT
CAAACTCCCCCCCCTCTCTATTTATCTCAAGCTCAAGATTCACTTGCTCCATCCCTGTTT
CAAAAATGCCCCGGCTTTAGTATGATATGTGGTGGATGTGATGATATGGTTTTATTGTTT
TGAAACTATGTTTTAGTGGTGAAAATATTCACAAAACAAATCAATTAAATTTTGTTTTGT
AAATTTTTTTATGCTCCAAATATTCCTTTTCCATTTTATTTAAATAGGTCATAATTTCTT
ATNNNNNNGGGCATTTTTGTTTTATTTTTAGCCTCAACAGGTTTGCCTGTGCATTTAGTT
TTGTCTCTGTTTGTTTTAAATAGGAAAACCCCGGTGGGTTTTCCTTCTTCTTATCTGGCG
CATCGAGCGGGCCTTCTCTCCCTGGCTGGCCCATCTCCTCGTCGCGCGCAGCCTATCCCT
GTAGACGACGTCTCCTTCCTCCTCCTTCTCCCGTCAGTTTCGTCAGAGGGGAGCCGAGAC
AGAGAGCGACGCCATCACGGACGTCGAGGCTGCGCGTCCCTCGCCTC