Contig Data
morexGenes
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Map Locations of contig_54754 (5261 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_54754

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_68418 4 1306 bp MLOC_68418.2 Available Available LOC_Os11g36470.1, FRAME:+3, EVALUE:3e-167, 13111.m03573 protein ubiquitin carboxyl-terminal hydrolase 21, putative, expressed
MLOC_68419 1 742 bp None Available Available None





CDS Structure of MLOC_68418






CDS Structure of MLOC_68419






Contig Sequence (5261 bp)

>contig_54754 5261 assembly3_WGSMorex_rbca.fasta
TGGACAGGGGTGCGTGGAAGCTTGCTATCCATGTGCCAGAACCATGAATTGGTCGCGAGA
TCTTATGGGTTTCANNNNNNNNNNNNNNNNNNNNNNNNNGGACTAAAGGCTTTGTTGTTG
TTTGTCGTTTGGTTGTGGTGTGGAACATAGGAGACGTTGAATCACACATACCACCTCTTC
ATCTTTCTTCTTGGCAAACCTCTTACCCTCTACGTCTTCAGATTCGTATTCTTCCTAATT
GTCTTCACCATCATGGATAGATGTGTTGACAAATTTCCTCAGTGGGCAACATTGACTTCT
GATTTCCTTTTTCTTTTCCTTCTCTGTTCTTCATCAATACAACATTGCCTCCTCTGACCA
AGCCATACAGTTGCTGTGGAGGGCCTTACGCATGGGAGAGAGAGGAAGTGTGCTGCTCGT
GGATCCTGCATCAGTTACAGTTGGATAGTGGTGGTCTCGTCCAACATTGTATTCATCTGC
TCCCTCTTTGGTCTATGTGCAAAAATTCCTGCACAACGTATTGCGGGGCGAAGGGAGTAG
CAAACACCCATCCTTGCTAAGCAAGGCTAGCCTAGAATCCAAACTCACCCAAAGATTGTT
CCGTAAGGATCTGGGTATTGTCAATGAGTCAAGAGCGACAACTCAGTCTTTCTCGCCCAA
AATGCCTAATCCTTAGTCTGTCTCCCCTTACCAACGCCATAATCCTCCTTACGTGTATGA
GCTTTTTCCAAGTGGTAGTTGTCCTGATGGCAAGAATGTTTACACAAGTATGTTTCTGAT
TTCCACATCTTTGCAAGCAGTTTCCAATTGTTGACAGATTTTGGAAAATATTATTTTGTG
TAACAGGTATAAATTTGATGATGAGCGTGTAACAAAAGAAGATACTGAAAAGGCCTTTGA
AGAGCAATATGGGGGTGTGGAAGAGGTATGTTATATTTCACACCGATATTGAACGATTAA
TGTTTGTTCTACTCATCACCATCATCTACATGGCTCTCTCTTTTTGATTATGCAGTTACC
TCAAATAAACCCTGGATTCAACAACACTCCATTCAAATTCACGAAATATTCAAATGCCTA
CATGCTTGTATACATCCGTGAGAGTGACACAGAGAAAATAATGTGTAATGTTGATGAGAA
GGACATTGCTGAACATTTAAGGGTATTTAGAATATTATATTTCCCCCTTCATTTTGATAA
CACTATTGTGGTATATTTTAATGATGAATGTGGATTCACAGATAAGGTTGAAGAAAGAAC
GAGAAGAGAAAGAACATAAGAAGAAAGAAAAAGCTGAAGCCCATCTCTATACCATCATAA
AGGTCAGGATCTGCTTCTTGTAGTGTTCATCATAGCTTGGATTTTCCTTTTAAGTTTGTT
GCTCACAGAGCTCATTTTGAAACTGTATCCAGATTGCCCGGGATGAGGATTTGAAGGAGC
AAACTGGTAAGGACATATATTTTGATCTGGTGGACCATGAAAAGGTCCGTAGCTTCCGAA
TACAGAAGCAATTGCCATTTAGTACTTTCAAGGTAACATGTCCTTGGAACTCCATGCAAG
TTGTTATTGTTGCTAAAGATTAGTATTTTGTAATCAACTGCTACAAACTGTTTAATAGGA
GGAAGTTGCAAAGGAATATGGCATCCCAGTACAGTTTCAGCGCTTCTGGCTGTGGGCTAA
GAGGCAAAACCATACATACAGGCCAAATCGCCCATTGAATCCTCATGAAGAAACACAATC
TGTAAGTTGGATTGTTCGAAAAGTGAAGCTTTAACGTGTTATCTCCTTTTGGCTGGCTTA
GGTCCAGTTGACTGTTACTTCTAATCGTGGGCTTAGACCTACTATCAAATGCTATCAATG
CAGTATGCTTTGCTGTGACATAATATAGAACTCTTACGAGGGGAATAACATAAATAAAGT
GAAAATCTTTGGTCATTCCAAGGACTCGCCCAACTTCCAAATGGTGCTCCTTTTGGATTT
ACCACCAACCAAACTTAAAATTACAGCAGTGTGTAGTGTGCGGATACTTGGGAAAAAGTA
AGACCTTTATAGTTTGGAGTTCTTGAGTGTAAAACATCGTATAGTTTTTCTTCAGTGTGT
TCTATTATATATGTATTCATAAATTTTGTTGTGCAAAGCTGGTTATTTCCATGAACCATT
TCAGTAGCTCAATCCAGTGTGAAGAACAATGTAAAATCCTGTTGTGTTGTTTAGATGACT
CTAGAAAAATTTGTGAAGAACAATGTAGAATCCTGTTGTGTTGTTTACATTTTGTTATCT
TTCTACCAGCTTTGCTTCAATTATATGCCAATAGTCCAATCACTATGTTTTCTTCTGCAC
AGGTGGGGCAACTGAGGGAGATATCAAATAAGGCACAGAATGCTGAACTGAAGCTGTTTT
TGGAAGTGGAATTTGGACTGGTAACTGGAGTTGCTCGCTTCCTTTTCTGTATGTTATTTA
TTTTAGAGTGTGACGTGGACTGGATTCAGGTTGCTTAACTACATCTGATTACTGATGTAG
GATTTGCAGCCGCTTCCTCCTCCTGAGAAGAGCAAGGAAGATATTCTTCTTTTCTTCAAA
CTGTACAATCCCGAAAAAGAAGTGCTTTGGTAAATTCTCTTTGAATTGCCCTCTTCATCA
TTATTTCATATATATAACTGTAAATTTCCTTATGCTTACATGTTACATTCTTCAACGGGT
GTAGTTTTGTGGGGAGGCTCTTTGTAAAGGCCTTGGGGAAACCTTCAGATATTCTGAGAA
AACTAACTGAAATGGCTGGGTTTACCCCGGATGAAGAGATCGAGCTATACGAGGCAAGCG
TTAAATCGACGATTTGATACATTTATACATTCAATGTCAAGATGACAAAGCTTAGTTTTT
TGTGCTTTACTTACAATAGTCATTTTGAGGTTTATCAAGTTAAATGGTGATAACCTTACG
TGACGATTGTATTTGAGTCGGTTCAATTTTTAATACAGGAAATTAAGTTTGAGCCAAATG
TAATGTGCGAACATATTGACAAGAAGCTTACTTTCCGTGCTAGTCAGGTTTGTCAATGGG
TGTTTCTTCGATTTGAGAAATGCAGAACTAGAATTAAACTGCTTACTTATTAATTCCCCA
AATTTCACAATATTGTTAGCTTGAAGATGGGGACATAGTCTGTTTCCAAAAGTCACCTAA
AGCAGACAGTGGTACTCAAGTGCGCTATCCCGATGTCCCTTCATTTTTGGAGTATGTTCA
TAATAGGCAGGTATAGCATCATATACTCAACTCAATTTTCATTTTATATGCTATTATGCT
ATGTTGGTCATTCCCAAGAAAGCTTTCGAGTTATTTGCAGCTTTCTTTTTCACTTCACTT
TTTTTTCTCTCGAGAAAATTCAAGAGATTTTGCGTTTCATTGCATTGAAAAGAGAGAGAG
AGTTGTTACAATCCTCCTAGGAGGCAATTACAAGTTCAGAAACAGGAAAATCAGTGAACA
TCCCATGTTTGGGGGGTGATGGCTCTAAGCCCTAAAGCACCAGTGCTTGCCGAGAGAGCG
GCCTCGTCTTTGATCTTCGTAAGCAGGGTATCCTCCGATGGTTGTCCTCCATTGAAAACG
CAATCCTTGCGTTGTTTCTATAACATCCATGGGTCGAGGAGGGTCATGGTGCCCAGGCCT
TTGCGCATGGGAGTTGGGGTAGATTCTCGTGCTGATTGCCACCATTCAAGTAGAGAGGGC
TCGCTGGCCGGAGGGGCGCATGGGATCTGCAGCCAGCACATCGCTTCATGCCAGATCTGT
CTGGCGAAGGGGCAGGCGAGGATGAGGTGGCGCATGGTCTCAGGTGCCTGGTCGCAGAGG
AGGCATCGCACGGGGTGTTGCAGCCCTCGGTGGGCAAGCCGGTCTACGGTCCAGCAACCG
GTCAAGGTGGGCAAGCCAGTGGAAAAGCTGGGCAAGTTGTGGATCCGGCGAAGGTGGCGG
CGTATGCAGATTTGGCGGAGTAGAGCCGTTTGCGCTCCATTTCCATGTGAGGCGATTCGG
CTTAGCAGAGAAAGCCGGAGGTATTGCCTGATTTCATGGATGCCCACCGTGCCCTGGATG
TCTTGCGCCCAGTGGTTGGCCACAAGCCCCTCTGCGACCGTCCTGATCTTGCGTCGGCGC
TTGGGGATGCACGTGTATAGTAGCGGGACGATCTCACGAATGGAGCGCTCGTCGATCCAT
CGGTCCTCCCAGAAAAGGGCCTCTCTGCCGTTCCCCAGCTGCATGGTCTAGGCCCGCCCA
TGCTCTAGTGGTGTTTGCGAGGCCGGTGCGTGCAAGGTCGCGGATGCCAAGACAACAATC
GGTCGGGCAACACGTTGCCAGTTGACGTGGCAGTGCCCACCATTAGCCTCTGCGCGCCCT
GCCCATAGGAAGCCGCGTTGGATCTTCTCGAGGGCCTTGAGGGTCTTCTTGGGGGTTGCT
AGCACTAGCAACCGGTGTATAGGAATTACACCGAGGATGGCTTTCACGAACGCGAGGCGG
CTGGCCTTGCTCATGAGATGCGCCTTCCAGCATGGGAGCATGAGGGCGGTCTTGTCAACC
ACGGGCTGCAGCTGGGCAGCGGACGGCCGCCATAGCGTAAGGGGGATACCCAAGACGATG
GGGCAGCCCAGCAGTTCCACGACGTGCGTGGCCGCATCTGCCTCGTTGCGAATCAGAGTG
GCCGTGCTCTTTGCGAAGTTAACCTGGACGCCGGAGGCTCGCCCAAACAATGGAAAGATA
AATATTCTAATGCAACAATAATTCAAATAAGAACAGTACAATCCAAACATAAAGTTTTCA
AATCGGGAGGCATTTGCTTTCGGTCATCCGGAGGTACTCGTCCCCGGAATCTGCAACCAT
GCCATAGGCAAGCATCCTCGTTGCAGCCGTGCACTTCTGGTAACCAATGGTTCCAATGGC
ATCCACCGAAGACGACCCCATGAACTCCTCATCCATCGAAGATGACTCCATGCACTCGTT
ATAGAAGTCTCCTTGTCCGAATCCATTGTGTTTGCTGCTTCAAAGTAAACAACGAGCACA
CATTTTTTTTCCGGCAATGGCATTACGCCGAACACTTGCCGAGCGTGGTGCCACCATGGA
CGGCGACGACAGGGGTCTGAGGATACCGGGGCTGCTGCTGTATCCATGGTGGATCGGCGG
CTCAGCCCAAGGCAGGAAGGCACCACATGATAGTAATCTTGGGTCCCACTACGTTGATGG
ATAAGTCTATGTACTAGGGTCTTTGTGGGGCTGCAGCACAT