Contig Data
morexGenes
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Map Locations of contig_54752 (4918 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_54752

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_68417 1 1223 bp MLOC_68417.1 Available Available LOC_Os02g13800.1, FRAME:-2, EVALUE:2e-78, 13102.m01534 protein HSF-type DNA-binding domain containing protein, expressed





CDS Structure of MLOC_68417






Contig Sequence (4918 bp)

>contig_54752 4918 assembly3_WGSMorex_rbca.fasta
ACCTCGCCGGAGCTGGCAGGGGCGCGGCCTCGCGATGGTTCGGCCTCGCCGGAGCGGGCA
GGGTCAACCGCCGCTGTTGTTCTTCCATGGACAACGCTCCTATGAAAAAGAAGAAGGAGA
TGAGAGAGAAAACAAAAGGTGTGGCTCACAGGTGGGACCCTCATCCACCTCAGCAAGTGA
GACATTGACTAGGAGAAGTCTTTGCCACATCAGCCTGAATAGAGGGGTCCCACTAGTCAA
TTTTGCTGTTAGACGCGCTAAATTTAGAATTAGTGTGATTTGTTATCCACTTGACGCAGA
AGTGGTGGTCTTTTGTGTTTTTTTGCAAAAATGGTGATTTTGAAGTACTGTTGCCACATT
TGTGGTGGTTTTGAGCAATTTACTCGCAGGACGACGACACTGTTGTACCACCTTGGCTGT
CCGCTCACTCCTTGCCAGACCTACATCTGGGAACTAAGCCCGTTTTGGGTACACACCTCT
CGTCCTTCCGCCACCCATGGAACCTCCGTCCCTATAGTTGTCGTCCACTGCAGGCATCAT
GCCCAACACTTGTTTGTCCAAATGCCATAGCCAAAGTGTTGACGAAGCCAAGGCAATTAC
TCGTACAACATGTGCTTCTACAACAACTTCATGGATTGTGTGGGGGCATTCGACGAAACG
ACGATGATGCAGGCGGTCCTAGCAGACGCAGAGCGCATATCGTGAATTTTAAGGGATCGA
TCAAGGGGCGTCAAATGTAAAATCGGAAGAGGGAACCGGGACATTTGATACAGATGGACG
ACTACATTACCCCGGATGCCCTATTTGTGGACAATTTTCATTGATGCTTTCACATGCGGA
AAAATGCTTTTGATCGTCTGTACAATGGTATCCAGGCCTATCATGTCTACTTCTTGAAGA
AGGACGTCATCACGAAAATTGAAATATTTGGTTACCGTAAGTGCATGTTGCATTGATGAT
GCTTGTCTATGGTACCGTCACATATTTGTGGGATGCCTACCTCTCGATGTCTGAAAACAC
ATGGAGAGTTGTCATAACGAGGCTTGCTACTACGGTCATCAAGGCGTTTGGACAGTGGTA
CTTTAGAGAACACACTATCGGAGACACCACCTCGACCAGGCAATGGCTGGAGGCCACCAC
TGCATGAACCCACCTGAACCGCACGGTCCTGCACGACGTCCTCAACATGCCGTTACCAGC
GGCCTGCTACTAGACGGCCACGCCACTGCCCAAGGGCGTTGCCCGGAGCAAGCCGCCTCG
CTGCCAAGATCTAGATCGGTCGTGCCTCCTCACGGGATGAGGTCCGCCCCACCTCCTCCA
TCACGAGTAGGAAGGGGATCCCTGGCCACCGTCTGCGGTCATCGGGCTAGCCCGTTGGCG
TCCTCAAACAAGACAGAGGGAGAAGCCCGACCGCTAGGGTTTGGGGGGATGTGAGTCGCC
CGGGATGGGGATGACGCATGCAGATGCATACAACCATTTTAGTATGAGTATCAAGATAAC
ATGGTCCTCAGAATTTTTTAAATGAGTATCAAGATATTTTTTGATGAGTAGTTTCACCAT
ACACCAAACTTGATTCTCAATAATCTGAGCAAAAGCCCTCTCCATCACCTGCCAATTTTA
AAAATTAAACTCGGATCGTTATGTTTCCCAATCACATGTTCAATCACTAAATCAAGGCTC
TCTTTACAAAAAAATATTTTTTTTCATTTCTTTCTTGTGAAATACGTAAAATTCATTTAA
AGGAAATGACTATGCACGCTTAAAAATTAACGGTTTGATGAATTGCACACCGTGTCCAGC
CTCTCCTAGCAATATATGATATCATAAAATTGGGTTAAATGAAAGTTGTGCTTCAAACCA
ATTCGTAGTTGGATGGTTAGGAGAACTGTGGTATCCTCTGTTCATCAGAATTAAAATCTT
AGAGTTAACATTGATGCTTACATTTTTTTGGATTTATTTCAAACTTTCCGGCGATGTGCG
TCTAGTGGGACGAGCCGTTTCCATGGACTACGAAAGCGTCTGTGACGACTTCGTTAATCT
TAAACTAATATGCTGGCTCAGTGTTTTAAAAATACTCATAGAGATATGATATGCATGCGT
TTATAAGAATTAATGTATCTTATTTATGTGAGCGACTGCAAAGAGACACACCCCTCTTTA
CGCACGAAACAAAATTGTACTCCATCCATTTTAAATAAATGATTTAATTTTATATTAACT
TTATACTAAGTTATTATAAAGTTAATTTCCCGAGGACAAATGAACAAATATATATGGATG
CTACGACATCCATGATTTAATTATTTAGTTTGCTTTGTTTATTTTAATTATCATTATAAG
TTACTCCCTCCGTTTCTAAATATAAGTCTTTGAAAAGATTTTATTAGTAGAGTACATACG
AATGTATATAAATATATTTTAAAGTGTAGATTCACTCANTTTGCTCCGTATGTAGACCCC
TAGTAAAATATCTTAAAAGACTNNNATTTAGAAACGGAGGGAGTAGATGATTGCTGTATT
TTGATATTGACATTTTAATAATTCCGAATATGTGGTAAATGTGTCAAATTCATATACAGC
TGCTTTTAACAGGGTTTGATATTGTTTTGCTACTCGTGGGGTTGCAACGTAGCCCCTCTT
TTGAGTCATGCTATGGAATAAAACTGCTTTTACTCGAAGAAAATCACAACAACTTGCCAG
CAGAGTAATCCACATAGCGGGCGGCGGCTGTAGTCTGTACTGTACATCCGGTAGAATGCT
ACACATGTCAGTCATGGAGAACCTGACCGACTGACTATAGATACTCCACTATTTCCCTCA
CGTGCCTAATTAATCCTCTCTCTACATAGCCACAAAATACTCACGTGCACACATGGCGAA
AGCACGCACACCAGCCGAACCAACAACCAACACACACACAGCCTTCACTTCACGCACGCA
GTCAGTAGCCGCTGTCAACGTGGAGCGCGTACGTCTGGCCTCCGCCGCCCGCCTGGACGT
CGCCTCCGGCGTAGCACAACCCTTCCTCCGGCATCAAGGCCTCCTCCAGGTTGAGGTTCA
TGCCGCTGCCGTGGTACAACATCATCTCGTCGACCCCCGCGCCGTCGACGGACATCCTCC
TCTGGGCTTCGCTGCTGTCGAGGAGCAGCCGCTGCGTGTTGGCCCGCGCGCCCTCGTCCT
GGCCGCTGCCCGCGAGGCGGCGCAGCACGTCGGGGTCGCCGACGACCTTGAGGAGGAAGG
CGAGCATCTGCTTGGGCCGGCGCTCCGTCTCCTGCACCCGGCGCCACATGTCCGCCACGC
GCTCCTCCGTCGCTCTCTGCTCGTTCCTCAGCCGGACCACCTCCATGGCCAGCGCCGTCG
CGCCGGTGTCATCCTCCTCGTCGCCGTCGGCCCCGTCGCCCTTGCCGCGCTTGCCGCTGC
CCTGGCGGCGCCGGACGATGCGGGGGAGGAGGTGCGTCTGGCCGCGGAGGAAGGAGGCGT
GCGCGAACTCCCAGCGGTCCGGGTCGACCTTGCGGAAGCCGTAGGTGTTGAGCTGCCGGA
CGAAGCTGGAGAAGTTGGCGTGCTTGAAGTGCGCCGGCAGCAGCATCTCCGAGAAGGCGA
AGGGGTCGGCGACGACGAAGCTGTTCCCGGCGGGGCCCCACGCGACCACGGCGTCGGTGG
CACGGTCGTCCACCATCCCGTACGTCTTGGCCACGAACGGCGCCACCCCCGAGCCCATGC
CGCCGCAGCTCATCATCGTGGCGACGGAGGGAGAGGACAGGAGATGCTTGCTTGGTGCTA
GCTGGGGAAGGAGCGGTGACGGTGAGTGGATTGGGACGGAGACGGAGGGGGAGGGGGAGA
AGCTGTGTCGTGTGGAGCGGAGCTGGGTGTATTTGTATATGTGCTGGGGATGTGGACGGG
GGAAGGGGGACAGGTGGGCGGACGCGTGGTGGCGCGCGCAGGCGGCGAGAGTTTCGAGCC
GCTGAGTCGACGTACAAGCGGCGGGAGCGGAGGCGCGCACGCGGCGGGCCTTGGATTGGA
CCGTCTCCACGAGTGCGTGCGTGCGTGCGTGACACTCCAAACAGAGTGGCAATGTACGTT
TGGAATAGCATCAGCTCTTCCATCGGAAAGGCACAACGAGGGGACAAGCCTTTGACCTAT
ATATACAGAAAAATAATATTACTGCTTCCTTATAAATAAATTTAAAATAGTTCTTTATGG
AGTGAGTAATTGAACAAAAACTCAAAATATTTTTAAAATACTTTTGAAATAAACCTGACC
ATCCATTATACTTTCTCTCTAAACTAATATAAGAACATTTAGATCACTACTTAAATGATC
TAAACGTTTTTATATTAATTTATGAAGGGAATACTTGTAAAAGAAAATCCCAAAGAAAAA
CCACCGCTGACATCAGGGCAAAAAGAAACCCAAATGTAGGTCAAAATAGTGTGAATAGTC
ACTTATATATAATTTTATTTCTTGCCTCGAGGTCATAACGTTTTTCTCTTAGTGAAAATT
TTATATACTACTTCCTCCGTCACAGTTTATAAGGCGTGCACGTATACCTAGGTCATCAAT
TTAACATATATAAAATATATTATTTAATATAAAAAATATATCATTAGAAAATAGAACATC
TAAAGTTTCTAANNNNNNATTTTTTGTAATATATGCCTCTCATTAAGTTGGTCAAACTGA
CGACCTAGGTATACGTACATGCCTTATAAACTGTGATGGAGGGAGTACTACAAAAGGAAG
TCAACTTTATTCCAAAAAACTTTTGATTTTTTTATTTGGAGCTGATGGAATATTTTGTTT
TTAAATTTGACTTTCTAAAAAACTAATGCCCTTTTTATTTGGAACTGATGGAATATTTTG
TTTGGCGTGTGAAAGGATCGATATGGTTGACTAAAGGGGGGGGTGAATAGACAACGAC