Contig Data
morexGenes
Links



Map Locations of contig_54717 (4688 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_54717

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_68397 2 1025 bp AK367531 Available Available None





CDS Structure of MLOC_68397






Contig Sequence (4688 bp)

>contig_54717 4688 assembly3_WGSMorex_rbca.fasta
CCCGCACCCTCCCTCGCCTCCCTCCCACCAGCGCTCCGCGACCGCTCCCCCTCCGACGGT
AACTGCCGCCGAATACCCCTTTTATTAAATGCGTATGTCTCTCTCAACGTTTAGGTCTGC
TACTGATCGTTGTAGTATTCATTGATTGAACCTTGGAGAATCCTCAATGTGCCCGGCATT
TGGTGTAGTGTGCTTACATGTAGGGAGTTGTTCAGACTTCAGAGAGCTGAATTCTGTGGG
TTGTTTTATATGAGTCCTGAATATTTTGGCGTGTGTGCCTGTAGAGTGGAAGATGGTTCT
TGTGGATTTGAGGAACCATGGGAGCTCAGCCAGGATCAAAGGGCTGGGCCCACCCCATGA
TATGTCGAGTGCGGCCAGGGATCTCGCTGATTTGGTGAAGGCCCGGGGCTGGACATGGCC
GGATGTCGTCGTGGGTCACTCCATGGGTGGAAAGGTCGCACTGGATTTTGCGGAGAGTTG
CTCCCGTGGCGATTATGGAGAATCTGCTGCTCTTCCCAAACAGGTTCAGTGAGTTATTTC
TAACCTTCACGTGGTTGGTTCTAACATATTTGTTCCTCTGTTTGCCAATTGTTTTATTAT
TTCTTCTGCATAAACTGTGTGATTTTTGCAACTTACAGTAGGTGCAGTGTGTACTTACTT
ATTTGCATAGGTATGAGGTGTTGATCTGGAAAATACTACTGTTACATATGAAAAAGGCGA
CACGCAGAAAACGAGAATCATGTAGTTCACTATATGTCACAAAGTAAAGTATGCTTTTGA
GCTGTGTAATATGAGATTCTAATATAGCATTTCAGTACAACCTTTGGAGCATTTGTTGTG
ATTATGTTGTCAGAATGACAATTTATTGCTTCTTGTACTTGATAGTCGATTTCTTGGCAT
CATCTTTATCCCCCGATTATTTTGATTGGTCAGGCTTATTGAACATTACTAGGTCAAGGG
GATAAATAATGTGTATCACTGTGTCATTTATTTCCTTTGATGCAGAACAGCTCTGGGTGC
TTGATTCTGTCCCCGGAGAAGTAAAAATAGATAACAGTGACGGTGAAGTTGAGCGGGTTT
TGCAAACACTAGCAAGTCTTCCTTCATCGCTTCCATCGCGCAAGTAATTCTTTTACATTC
CCAATTTCCCACTATAAGATATATGGAGTATATTTTCCTGCTTCCTAGCCCATTTGAAAT
ATTAATTTAAAGTGTATGATTCAATCTGTTCATTTTGTTGAATAGTGGGCATCAGCAAAC
AAATCTAGTGCGCACATCACCTGATCAAACCTAATGTAGCGGCCGATCACACAAAAAGAT
TCATGTGCAAACAGTGTGGTGTATGAGTACATGGCACAAAGGCTAATAACAATGCCGAAA
GATGAAATGACAGAACAAGAAATGAAAATTTGTTATATTGATAATTCTAGTTATTTAGTT
AATATGTATTGTTATATTGATAATTCTAGTTATTTAGTTAATATGTATTCCAAAACTAGT
ACATGGTAAATTCTAGGCTATAGTGTGTGTAACCATGCTCCGGAAGGGTGTGCATGGAAT
CAAAAGTTTGCTAGATACACAAAGCACTAAAATAACCTTAAACACACCGTGCATTTCAAA
TGTTAACTGGCTTGGTTACTTTGATGCTCAGGGCGAGTAATTTTTAATATCCAAACAACA
GATATTTGCCCGGGCGAGTAGGAAGCGTAGTCCTCTTATTGTAAAATGGTTGACGCCTGC
CTGGTCCAACGATTATCTTGCACTAACTTACTCTTGAAGCCTTGAAGGAGTAGAGCTAAC
ATTTTGTCCCTTTCAAGATATTTAGCATGAAGTACTAAATGATTCACTTCTGATTCTTAA
TGTTATATCTGTTTGCTATCAGGTGGGTTGTGGACCACATGGTCAGCCTGGGATTCTCCA
AGTCACTTTCAGACTGGATTGGCAGCAACTTGAAGAAGGACAATGAACATGTGACCTGGG
CTTTTGATCTTCAGGCTGCCACAGACATGTTTAATTCTTACAGGTAACAATCAGTTTATC
TTTTACTTCTGCAACACTTCCTTTTGTCTTATTATTGGCCTGTGTTAGTATCTTCAATTG
ATTGGTGAACTAGCTGTTATGTAATCGTGCATCATCCAAACACATTCAACATTCTGGTGT
ATTCAGACTGAGTTGATTTATTAATTTCCAGAGATAGAAGCTACTGGGCACTGCTGGAGA
ACCCACCAAAGGGTTTGGAGATCTCAATAGTACAGGCAGAGCTCAGTGATAGATGGCACC
CTGATGATGTCCAGAGGCTAAAAGCACTATCAAGGAGAGGCAGAAAACCTGACGTGGGGA
AAGTGTCACTCCACGTCCTCCCCAACTCCGGCCATTGGGTTCACGTGGACAACCCCAAGG
GGCTGCTCGAGATCATGGCGCCTAACTTCCTCTCCGCTGTTCAAAATTGACCTGTTATTT
TACTGTCAACTCCAGCCTTGTGACAGTGCATCTTGTCGCGTTTGATCACACGAAGGATAC
TTATTCATGCTCTCTTACTGTGATTGGATGAGAGCATTTTGTGCTTTCTGTTAATAAAAG
TGATTTGATTCTACGCTCTCTCCTTGCCAAGGATGCATCATGGAAGTGATGTAGTGTGCT
CTGGTAATAAAGGGCAAATGTGGGATAGCGTAGCCGATTAGCTTGCTGATAGAAGAATAA
CCATGACAAGATCTGAATTTTTTAGGGGTTATCTTAATATGTGTTGTGAACATGCATGAT
TTTTTTCAGATTTTTTTGCATTGTTTAAATTTAAATTTAGGCCGCAAGGCACACGATGAC
ATGCAAACGTGCATGTCACCTGATCTCCGACAAATTTTGGGCAATTTTCTGCAGCACATC
AAGACGTCCATGCGTTGAGCAAAAGTGAATAGCACCGTTGAAATCTCCATCGTGCGGAAT
TCGGCCGGCAACTGCCATCCGCACAGTAGTACAATTGGTCTAAGGATGTGTGTCCGCTTA
GAGCGTCTACAGCGAGATTTATCAAATATGACCTCCTAAATGTTCACGGACGCGTATGGT
CAGTGATCGAACGCGTCCTTTATTTGTCTGTTAGTAGAATCACATTTCTTTTTTTTTTAT
ATGTCCGGTCATTTGTACATGATTGATGGAGAGGAAAAAAGAGAAAAAAAAAGAATGAAT
AAAGAAAAAGAAAAGATGGTCCAGGATGAGGTCGCGGCCTGCATGATAGACTGACCAGAT
GCGTCCGCAAGCCCTCATATCCTTCCCATATTTTTCCACTATACGAGGGTTCGCGGACAG
CCCAGACGTATATGGTTGATATAAGAGATCCGGTTGTGTCACTTTTTTCATTCTCTCTTC
TGTCCCGTCACTGACCGGGTGCGTCTACGGGCGTATGAGACATCGTTTGAGGCGTACGAT
TGTAGATGCTCTTACAACATTTTAGAGCAACTCCAACCAGGCGATCCATTTCGTGTGCGC
GTGTCCGTTTGGGTAGTTACGGACAGAAAAAATCTTCCCAACACGGCGACCCAAACGGGC
GCACGTCTGTTTTTTATCCGCTCGGACCCATTCCAGGCTCAAATTTGGGCCGGATTTGCA
TTGGCACAGACATGGGACGGACGCTTGCGATACCCGCCCTTCTCCTCCCCCCGGCCCGCC
AGTCGGTGGCACAAAGCCACCATTTCCCTAATTTCCCCAAAAACATCCCGCCCACTCATG
CTCGCCATGGACGACGACGCGCCGACCCTCGACGCCGCCGCCGGTCTTGCCTCCCTCGCC
TCTGCCGATCCCATCTCCGCCAAAGTAGTCAATCCACGCGACACCAGCAAAGCGCTGGCG
CCGACCAAGAAGAAGAACGTGCTGACGCCCGAGGAGCGCGCCGTCCAATCGTTGAGGAGG
AAGAACCGCCGTCATCTGCAAGAAGCGAGGAACGACGCCGCGGCCGCGTCCACCCTCGTC
GCTGCCGTAGAGCAAAAGTTCGATGCCGCTAAGACCAGCCAGGTCGCCCGCGAGGCCACG
AGGCAGACCCTTCTGATGCTAGGGTTAAACCCAGGCCAACACGGGCTCGTCGCTGCCGTT
GTGGCCGCGACCATCACCGGCTCGTTGCCCCTTCATCACCCACTACCGGACTCACCGTGC
ATGTCCACTACGCCACAGGCGCATGACTTCCAACCCCACCACCCGCAAGCCTCCCGTTTG
TCCAACTCTACGGGCTCCGCTTCACGGGAGGTGAGCTTTGTCGCGCCTGCCACGCCAGCG
TCCATGGGCATCGATCTCAATGCGATACGTGTGGGCGGTGGATCGTCCTCTGGGGGTGTG
ATACGTCTCCAACGTANNNATAATTTTTGGTTGTTCCATGCTGTTATATTATCANNNNNG
GATGTTTTATGATAATTTTATAGCAACTTCATATCATTTTTTAGGACTAACCTATTGACA
TAGGGCCTAGTGCCAGTTGCTGTTTGCTATTTTTTCCTTCACAGAGAATCAATATCAGAT
GAAGTCCAAATGNNNNNNNNNNTTACGGAGATTTTTTTGGACCAGAAGGAAACGTGGGAG
CCAAGAAGGAGCACCAGAGGAGGCCCAGGCGTCCCACTAGACACCAGGGCATGCCTAGGG
TCCCTGGCGCGGTCTGGTGTCTAGTGAGGCCCTTGGGCATCACCTCCACCGCCTTTGAGC
TCTATAAA