Contig Data
morexGenes
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Map Locations of contig_54537 (9125 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_54537

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_68293 4 3957 bp MLOC_68293.1 Available Available LOC_Os02g45480.1, FRAME:-2, EVALUE:0.0, 13102.m05099 protein nucleic acid binding protein, putative, expressed





CDS Structure of MLOC_68293






Contig Sequence (9125 bp)

>contig_54537 9125 assembly3_WGSMorex_rbca.fasta
GAGGGGGAGGGGGGGGGAGGGGGATCGTGAGGGAGAGAGGGGGGGGGGGGGGATACCTTT
GAAAAGAATTTCTCTGGTAGCTTTTCCAAAACAGAAACCCCTCAGGAGGCCTACTGGAAC
GGAAAAGCTGGCAGGGTGATATCAACTATAAACTGTGTGCGCAGGGCAAGTGCAGCCCAA
ATATCATGCTTTCAAATCCTCAAATCACATGATACCTTTTTCTCATTTTCTTTAAGGTGG
TGGCTAGGTGGAAGGTTACAAGAAACAATATGGTCAGTGAATACAACTTGAACTGCATGC
AATCTGCAACTCTTCTATAGGGCACTTCACTCAGTCCAGTAAAGGATCAAACTGTTAAGA
ATCGGAGAAAGGTATCCTACTGTTCTCAAACATACTCTTGATGAAGACTCTTAGGTATAT
TTCAATGCTGGTGGCTATGAAGAAAGGTAAGCCTCTATGAAGATGTCGGTTGGCTTACTG
AAGCTTCTTGTTTTACGTAGTTCTTCCTTTTCAGGAGCAGCAATCTCTTTGTCAAGGTGG
TTTTCTGAAATCATCATTCCTTCTCATTCATTGGTAGTAAGTGTTACATCACTTACAAGC
AAAGGAACACTAGATGCCAATGATTGTCCATCCATACACTAGTAGTCAGTGAGAACCTAG
CTAGCCTAGCAAGTTCATGAGCAGCAAAATTTGCTTATCTATAGCAATGCTCGAACTGAA
TTTGTAGGAATTCATAAGCAATGTGATAGCAGTCATCAAAGATCGCCGCGCCTACTCCAG
CAAATCCTTCAGCGCCGAGATTACATCCAAGCAATCCAAGTTGACAAGCAATCGATTTCA
TCCTAAGGATTGTGCTAGGTTCAGCCCATGCTTCATTGCTGTGACCTCGGCTGTTAGCAC
ATCAGAGCACCATTCCATACGGCTGTTAGCAGCAGCTATAAATTTCCCCGAGCCATCACG
AACAACAGCACCAACAGCTCCTTGCAGTGTACCTGCGTCAAATGCCACATCCACATTTGG
TTTAACGAAATTTCTCAGAGGTGTCCAACCACCCCGTTTAACAGCTGCTTTCGGTGAGTA
GGCCGCTGCATAATTTGCAACCAATGATCTGACCGCCATAGCTATCTGAGCCGGCGTCTG
AGTGGCCTCCCCATGTACCAGTTTCCTACGCTCCCACCATAAATCCCATGACCCAACAGC
AACAATTAGATCAAGTTTTCTGAGACCAAGAACTGGTGAGTGGAACGAGATTCTCCTGTT
TAAGCAAGAATTCCAGCACTGCTTCTCCAGCAAGGTCAACATCACATGCATGATCAATCA
GGCCATCCAACCCGAGAGCTGCCCACATTTCCTTGGTTATAGTTCTTTCAGCAGTTATCT
CTTTGTCAAGGTAGTTTATTTCTACCTGGGGTGTTGTTTTTTAGACCATAATTATTGAAA
CCAGATCACGTGCCAGGTATGAACCTGTTTGGGTTAATTCGATAAATGACACAACTAACT
ATGCATAATTGAGAAAGGCCACAACAAAAAAACACTTAGATATGTCATTCTGATAATTCC
CAGACCAAAATGTCCCCGCCTGCTCCTTTCTTCCCTTTCTCCAACCCTCACCTCATCGGT
TCACTCTCATGGGCTCATGGTTGCCACCTCTGTGATGGCGAAGCCCATCACCACCGACCA
TGCAGTCACGAAGTTCGCAACAATCCAGTGTTTTACCCATCGCCTATTATTCTCGTTTCT
CCATGGGTAGTTGCTATCCCACTTTACCCAGCCACACTTGCTCCCTGCCCCTTTTTTTTC
ATGGAAAAAGGAAATATGAATTTCTCCGTGCTCCAGATCTGTTCACGCTTCACAGCCCAG
CATGTCGGCTTCTACAGTTGGGTCTGGACATAAAGGACAGGAGGGAAGATGGAGAAGATA
CAAGAAGGAGAGTAGGAAGGAGGGCGAGCTTGCTAGAGCACTGCCACTGGTGGTGGGGAA
GATAGGATGTAAGAGGAAGGAGGGAGTGGCAGCTTAACTGAAACAGAAGAAACATAAATT
GGCATTTTAGTGTGTTCATGCTAATTAATGGCATCCAGGTGCTTATTAGAAGTTGGCATT
AATTTTTGTAGTGTCATTTTTCAAATACGCTGAATTGTAATAGTATTTATCAAATTAACC
CTTGCTTCGAGGACCTTAGGTATGTAAACGCGATAGCTTGTATATCAACCAAATAATAGT
GAATGCAGCATTAAAAAAACATTATTGAACTTAACAGTCATTTGACCAGTTCACTCACTG
GTCTGGTTTAAATATCCAAGTTCAATGGTAGACAAGTTGGCATGCATTGACGTATGTAGA
TTCCTGACACCATGTAGACGTTGAGCTTGCATGTGCGAAATTCTGAAGATGTTTAGCTAG
CATATGACGAGGAAGTCCTAATGGTAAGTTCAAAGGAGCGTAAACAAGATCTTATAAGAT
TATTAATTGTACTGTATATTGCTGATGAGGCAGGACATAAATAAGTAAGAACAGCGCTAC
ACATAAAAAAGGGTCAAGAAAGGACGAATCGGAAGTTAACAGGAAAGGTTGTGACAAAAC
CAAACTGCAATCACACAACATGACAACTGTATAAGAGTGTCGGAGCACATACATTCTCCT
CTTTGTGTGTATATGTTACTTCTAAGTTTCCACTTTCTGTAGCTGCCCAGACCTAAGAAA
AATAGAACTTAGAAGTATGAATTGATTGAAAAGGATAAATATGTAATTGGAATGTAAGAA
CAAATCATTCGATAACAAGGAGACAAGGATTGAGACTAACTTTTATTGTTTGATCCAAAG
AACAAGATAACAGAAACTGATCCCAGCATAGTAGAGACATAACTACATTCGTATGATCAG
AAAGAGTCTGTATGCACTGCAACGTTGCTAGATCCCATACCTGAAATATTTGTCATTTTC
TTAATAATATTTGTAGAATGGGAGTATACCAAAACGACAACATGTCTGATCTTAATTGAA
CAATGTAATGCTAAAGTACCATCTGTCGCGTGAAGCAAAATAAGTCCAGGTGACTGAAAA
TTATGCACATTAACAAACAAGAGATACTTCATGTTGAAACAAGATTGGGGATACCAAAAT
TACTATGAGAACTTCAACAGCAACAGTGAAATAACAGAGTTTCCATAGCATCAGAATTCA
TACACCATTTGTAAGTGTTACAGCAGTGAGGTATTTTATTTTATTTGTTGGGATTGGAGG
CTTTCCACTACGGTAGATGATATATTTATTTTTCAAAATACCTGTTATAAATGTTCCACA
TGTTGGTTGAGATATCACCATAAAATGTACATGTAAACTCACAGTAAGTTATTGAAGTTA
GCACCCACTCTAAAATCTAAAGTTATATGTGATGCAGGCCTGCAACACCCATAGTAACAG
TGCCTAACCTGATGCAGATCTGCACAACCATTAGGTGCCAGCTTTGCTTGTATAGTTGCA
TTTATTTTGACTACACAGTAGCACAATTCTAAGGCATCATCTGTTTTACAGCTGACTCGT
ATCTCCAGATGAACTAATTACCAATATGCCTACCTCTTAAATTGATGACAAAAGTCAGAA
GTGTATAACTATGTACAATACATGGGCCTACTTTGCTTGTGCATTGTAAACTTCCATGAT
CCACCATTAGAAGAAACAGAGAGTATAAAACAGATGTTGACCTAAAGTGATGGAAGTGTT
ACTACAAGCTAACAGAAATTCATGATCTGATGCATGCATCAAATCCTACTACATCAAGTG
TATCTAAGAATGTGTGAACAACAGTGCACAAATTCTCAATCCTTACTCTAATGGTTTTAT
CCATTGAGCCAGAGTAAAGTCTCATGCCTCCTACTATTAACGAAACAACAGCAAGCTGGT
GCCCGGTAAGAGAAGCAGCTGGCTCAAAACAATTTGTCACGGCGCTAAATCTCCATGCCA
AAATCCTTCCATCCTACACCAAGTGTAATACGAGAGAATACATCATTAACAAAAAATATA
TTTGCCAAGACAAATGTTAGATCCAACGACAAGACAAAAGGAAGGAAGTTTACCTGTGTT
GCCGCAAAGAGTAGCTCATTGCCAACTGCAAGTGCATAGACTTGTCCAGTCGGCCCGGTA
AGGTTCATTTCTGCTTGAGTTTGCATATTCCAAACCTGCAGCGACAGTTCATACAGTCAG
ACACACATGTGGGACAGCAATAGCATTGGGTTAAAATCCCAAATCTCAAGCACCATTTCC
TACCTTCACAGCATCAGGTATTCCAACAAACACCCATGGCCCCTCGCTGATCATGCACCC
AACCTCACCCCCCACGGGGAGGACACCAGCACACTATCACACACCATATAGAAAACAAAG
GTACTGAAAATTGTCATACAGAACACACAATCCTTCCAAGGATACAATTCAATGATGCCT
CGGCTACCTGTCCAGTTTGACAATCCCAAAGGCGCACCGTTCCATCCTTACTCCCAGAAT
ACAGCTTGTCTGACCCAGCAGGCAGTGCGATCCCTGTCACAACCTGAAGGAACGCACAGC
ATTTGATCAGCGACGTTTCGAATTTTACTAGACGGTCTTATCTGTAGATGAAGTACCTTC
TCGTGGCCCTGGAGAGGGGTGAGCAGCGTGATGCTATTGCTCATGCAATATGTGTGGGGG
TAGCGGCACTTCTCGCCGTAGGTGCAGTCTCCGGCGAGGAAGAACTTGCAGGGCCGGTCG
GGCACCTTGTGCCTCACGCCACCGTCTGCACCTCCGGGGCCCCTCCCCCATTTGTTGTAG
CCACCGCCGCCGCCGCGCCCCCCTCCTCCTGAGTTGGGGTTACGCCAGACGTGCCCACCA
GGGCCATCCCTTTGGTTCGGGCGCTTGGTGGTGGCCGCCTCAGGGAGCTCGCTGTGGAGG
AAGGGGCAGGGGAAGCGATTGCATCGCCCAGCGCGCCAATGGATGCAGACCTTGGTAGAG
GAAGACGAAGAGGCGGCGCCGGGCGCCGGTCCGAGGCGGTTGTGCACGCGCTTGTTGCCG
AAGCGGCCGTCGGCCTCGAAGTCCATGGGCGTCGCCTAGGGTTTGTTGGGCTCGGGAGGC
GGCGCGGGCAGAGGAGGAAGTAGTCAGATGGTATTCGGGGTTTGACGGGAGCAGCGGCGG
GGATGTTGAATTTATTTAGGAGGTAGGGTCGCGTGGAAGCGACGCGGCGAGGGCTCGCCG
GAATGGATGGGGAGATCCGGATCGGAGCGGGGAGAGGAGGCGCTTACGGTGGCCCTGCTT
TCCCCTTGGTCGGGTTTAGCTCGCGGGCGGAAGGTTGGGCCGGCTCCGGTTAATACAACG
TGGCCGGTGCCCCGCAGGCTGGCAGACGCCGACGAAGCGAACCGCCTGATGGAAGTACAT
ACACCATTTCGTTATGTACTCCCTCGGTAAACTATAAAAGTATTTAAAACACTATTTTAG
TGATCTAAACATTTTTATATTAATTTACAAAGAAAGTATAAAGTAATACAAATGTCCGTG
CGTTGCATTGGGCGAAATATTAAATATAATTTTCTTTATATGTTATTATGCAATATTATT
TTAATCTAATTTTTGCAAGCATTAAAAGTAAGGTTACATTGAGTATTTCTTTTAGCCATG
AAATTCGATTTTACTTATACAAACATTATAAAATAGGATCATCAGAATGATTATAATTTT
AAATAAGTCCGGATAATTTTTTGTATAAATTATAAACAAATATTCATGAATGCGCTAGTG
TTGGAGCACGTAGACATGCTCCTTAAAAATGATCTTGTAGTTCCCTATACTAACTCATGC
TCCTTAAAAATGATCTTGTAGTTCCCTATACTAACTTTGAAGTTGACGGTTGGATTGTTC
TGTAGTAACACTAAGTGATAAATTTAAGAAAGAGTTGGACATGGGAGACGGCGGGAGCTC
GACTTTTATGAGCCGCCTAGTGTCCCATGTCCTATTCTACCTCGCTGACGGCCGGACGGA
CACTACGAAGGGCATATCTAGCCGTCGGGCATGGACACGACGGACCCGAACGAACCCCGC
TTAATATTAGATTTATGTTGCATGTAATAATATAGATTTAAGGTTTCTAATTTAAAGTAT
CCGGTTATAGAACTCGTTATTTGAGGCTTAACTGATCAACGTCCGCAGATGCGTCCAGAC
GTTTCCATGAAAGTTAAAGAGGTCAGATTTGTTAAGTCCGGTTATAGATGCTCTATGAGG
CGGTACAATCAAATAATTATAATGAACTAATGTGAAAAGGAACATCTAGCAAATAATAGT
TTGTTGGAACGTCACGAACAACCGCATATAAATCCAACGGGGATGAGCACCGAAGTATCC
AACAGCTTCGAGTCTGTGTACATCTACCAACAACTATTGATCAAAAAATAGCAATAGGCA
CTAAATCTCCACCGAGCTGCGCACTGCATGACCCTTATCCAAAACATCACCATTCCTCGT
GCTGCTACATAGAAGAGGAGACAAGCGTTGATGCCTGGTCGTGCTCCTCACAACAGCCGC
TCGTGCTGCACCCAAGAAGCACTCCAGTACTTAGTGCCCGACCGCGGTGGCAGCCACTGC
CGGGATCCGTCCCTCCGTGCATCCCCACACCAGCACGCCGGCAAATCACCCACTGCACAA
CCATGGCGGGGCGGCCTGTTCAAAGCCGTCATCGATGTGCGCCTCTGCTGGGAGCCTGGT
CATGGGTGCCACCATCTGGGAGTAGCAGCATCGGGGCCAAGCCGGTGTCCGGTAGCACTT
CCCCCGCGGTGCGCGCTGAAGGCCACGGCTCGGGGCCAAGCCGGTCTTCGGTAGCACTTC
CCCCGCGGTGCGCGCTGAAAGCCACGGCTGCACCATGAATGTCGCCTCCATTGCGGACTG
GTGCGTTGCAGAACGCCTTGCCATCAATGGGACATCGCGTCGCGGAGCGAATTGAGCGAC
CACGCTAGCAGGAGCCGAGAAGGTCGCGGCCGCGAGCTCTGTCGTCCGTCGTCGCCTCCT
AAAAAGGAGCGACCTTCATGCTCTGTTTCGCACGCGTTGCCGCTTCTCTGACTCGTCTCA
TCCTGGCAAGATTCTACCCTCTCCCCATCTCTCACCATCGCGAACTCTGGATCCGGCGCC
CCCAACCTTGACAGCCTTCCATGCGCCTCTCAGAGCCTCCTTCGCCCGGATCCGTCTGTT
GGCAGCCATCTATCGTCGTTCTCCGGGGTCAAAGCCGTTGTGCCATCCAGATTGNNNCGT
CGTTGTTCTGGAGGTCCGGCTCCGGCGACCGCCCCTCTCCGGCTCACACGCACACTCTCT
CTCTCTCTCTCTCAGTCCCCCCTTCATCGGGCCGACTCTCTCGGCCCTCTCTCCCCTGCC
GTGAGCCTTCGGCCATCCCCTCCACCTCCGGCCCTCTCGGTCTCTCCTGCACGAGCCCCC
TCTAGGCGCTCTGCCTTCGGCCTACCCGCCCCCCTGTAAGCGCACAACGCCCACTGGCCT
CCTAGTCGTGAAGCCTCATGCAACACGCTCGCCGACGAGCCGAGCAGAAGTTATTCCCCT
TTCCACCTTCTCTGCCACTAGAGAAGATAGAACAAAGGAGTGCGGGTGGAATTCTCACAA
GATGCATGGGTTAATTTGCAAAACGGAAATGTTTTCTCAGATACCACTTAAACAAGGACT
GTGGGTTAAACACCTAAAATCTCAAGTGCCTTTTTGCAAAACTACCTTGACGACGTACGG
CAGAAGTAGTAGCTGCTTTATTATTAGGGAGAGATGAAAAAGAAAATTTTCGGTTTTGAT
AGACACGTTTTCCTCCTGTTATATATACTTATAAAGCAACCATGGCAGACAGTGCATATA
ACCGAACAATATAAGGTGGTGAAGAAGAGAACGGACGTTTCCAGGCCGAGCTCCATGGAA
ATCGAAATTAAAAAAAATCAATTTTTTATTTCAAAAAAATCTAAAAAAATATGCAAGTAA
AGAAGAATATTATGTATATGTGTGTAAATTTTTAGGATGAAATACCTTAAAATACAATCT
GCACAAAAAAGACAAATTCATGGTCTGAGACGATGAATAGTATCATGTGTTAAAAAAATC
AAATTTGTCTTTTTGTACAGGCCTTATTTTAACGTATGTTTTCTGTAAATTTACACACAT
ATGTGTTACGCCGTCACTTATCTCTGTATTTATTCAGATTTTTTTAAAATATAAAAATAT
GAATTTTTTTGAATTTTGGATTTCATATTTAAAGGTCATCATGGAGGTTGAGCTCCAAAA
GCAATTTTCCACATGAAGAACCCTTATACAAGCCGATTTCAGAAATCAAACCATGCAGAA
CACACACGACTACACTACTAAAAGAGAGCGCGTGAAGAACTGAATACAACGCCACACAAA
GCCCTAATGACATCTCCAATGACGACCCGCAAACCGTTCACATTCGTCGTGCGGTCCAGA
CATGTTGTGTCATCCAACACAGGCTTCTATCGGTCTGCACGGCAGTCCAGACGCACTTTC
TCCCGCAAACAAAAGACATACGTGGGGGGCTTTGCGGGGGTCCGGACAACACCCACTCCC
GCTTCTGACCGCTCTGGCCCACCCAAATCCCCTCCTCCTCGCCTCGTGCGTTATGTTTGG
TGCCAGTTGCCCGCATTCGTGTTGATGTAGAGCACGCCGCTCCTATAGGATCAAAAGTAT
GTCTAGGAGGATAGTTAGACTACTTGACCAAACTAAAACTTAACATTTTCCTAAATTTAC
CAGGTGACAAGTTTTAGCGATTCTACTAAGTCTAGCACACCCTACACATGCAAGACTATG
AATATAGCAGCGGAAAGTAATGACATTGCAAGTGTAAGTAAATGAGGGTAAGGAAGATCA
AGCGAATGAAGACACATAGATTTTTGACATGGTTCCGATAGATAGTGCTATCGTACGTCC
ACGTTGATGAAGCCTTCAACCCATTAAGGGTAACGGCTCTACGAGTCCACGGAAGGCTCC
AGCTACAAACGGTCCACGAAGAAGCAACTTTGTCTATGCCATCATGGCTTACGTCCGTGA
AGGACTAGCCTCACTCGGGGTAGATATTCACAAGGTAGATGATCTCCTTGTCCTTACAAA
CTTCT