Map Locations of contig_54431 (9474 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_54431

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_68236 2 1327 bp MLOC_68236.1 Available Available LOC_Os02g37870.1, FRAME:-3, EVALUE:0.0, 13102.m04151 protein Brix domain containing protein, putative, expressed





CDS Structure of MLOC_68236






Contig Sequence (9474 bp)

>contig_54431 9474 assembly3_WGSMorex_rbca.fasta
TGGGGGAGCATCGTGCCTCCACACCGCTCCAAACAAAGATTAGCACCCGCAAGGGTGTGA
ANNNNNNNNNNCATCATCGTCTCTGCGTGCCTCAGTTCTCTCTTAGCCGATCCCTTTACT
TATGCACTTTACTTTGTGATAGCCATATTATTTCATGTTATATATCTTGTTATCACTTAC
TTGTTTACCTTGCTTAGCATATGTTGTTGGTGCANATAGGTGAGCCTAATTGTTTTAGGT
TTTGTGCTTGAAAAATTAAGTGCTAGATTAATTTCGCATTTGTTCAAGCTTAAGCCATAA
TTATTTTAAGCGCTTATTCAACCCCCTTAGGCGACATCCATGTCCTTTTAGTATCAAGAA
AATGGTCTTTCTTTTTTTAGGGTGGTCATTTATTGCGTGCATATGCCAAAATTGTAAAGG
GAGTAAAAAAACAAAACCATGTTTGGCTGATTTTGCTGTTAGGACTATTGATTACTCATT
TTCACAGGGATAGTGGGGAGCATGGATGTAAGAGTATTGGAGATGTAAAATCAGAAGACG
AAAAATATACATATTCAAAAAGTGCCAACTCCAACAAATAATGCAACACGGAGATGTAAA
AGTGCAACTCCAATAAATGGAGCAAAATGAAGATGTAAATCGATGACTGGTCAGGCAACC
TGTACAGCCGCACAATTTAAAATAAAAACGTGTGAATTGAAACTTATAAATTTCACATGC
CCACAATATGAAATTATTACATAATTCATCAAATCCACAACATCAAATGCAACACAAATA
CAACAAAGTTCTTGCACAATACAACAAACAAATTATGAAACTAGGCAGCTCTTTCGCCAT
GCCATTTCTAGTACTCCCCAATCAAATCTTTCAGAAGTGTATCAGAATCCCTAATTTCAT
TGTACTCCTTCATGAAACGTTTGATTTTCTCCTATTTTATCATCAGCATAACGCGTACGC
CCATCAGATCATAGTAGGTGTAATCTAAATCATGTCCACACTCATTCTCAATGATCATGT
TATGCATGATCACGCAAGCAGTCATGATATACCAACATTTTTTATTCCAGAATCTAGATG
GTCCTCTCACAGTAGCAAATTGGGATTGTAAAATCCCAAATGCCCTCTCAACATCTTTCC
TAGCTGCTGCTTGTGCATTATGAAAGATGAGTTCTTTCTTATCTTTGGGTTTTTTGATAG
GCTTGACAAAAGTGCTCCACCTCGGGTAGATCCCATTCCCGAGATAGTACCCATAGTTGT
ATGTGCACCCATTTGCTTCAAAAATCACCGGTGGAGCTTCTCCATTGGCTAGCTTGGCAA
AAGGAGGTGACCAATCGTGCACATTAATGTCATTGCAAGAGCCAGGCTTCCCAAAATAAG
AATACCAAAACCATGTTTCATGATCGACAATTGCCTCAAGAATGATAGTGTCATCCTTCC
GACGACCCTTAAATTGAGCATGTCATGATTTTGGACATTTTTCTACTTCCAATGCATGCA
ATCCACGAGCCCTAGCATATGTGGGAACCCACGAACTTTGTTCATCTCCAAAAGCCTCTA
AGTGTCCTGGACATTGGGTGCTCTCAAGTACTTTGGACCAAACACTTCTAGCATAAATTG
TCATCAATGTAGTCTGTTGGAACACCATAGGCCATCATGCGCAAAACGGCAGTGATCTTC
TGCTCGATGCTATGTCCAAGCATCCAGACACAATTCCTCCTCTGCTCGAAGGATCGGTCA
TGCTCCTTCACGGAACTGGAAATGTGGATGAACAGATCTTTGGACATTTTAAACGGGCGT
CAAAAGTAAATATCTAGGAAAATGGGTGGTGTAGCAAAATAGTTGCGCGTCAACCTCTCG
TGTGCCTCAACCCATTCTCTCCAGATGAACACACGGCCAAACACGGAACCGTCGTGCTTC
AGCTTCTTCCTCTTGTGCATCGCCACTAGAAAATCAATGCCATCTTCTTCGGTCAAATCA
AATTCCTCATCGAAGGAGAAATCGTGCACCTAAGAGGAGCCACACGATCTCATCTACAAT
ATGAAAATCACCGTCAAACTATATCATCACGGTCGAGAAAAAACTCATGGTGTGCATGAT
TTTTTACCTTGGGGGGAATTTTCTCAAACACCTTGCGTGCGAGGTGGAAGGATTCGACCG
ACAACTGGGAATTTCCTCAAACACCTTGCGTGCGAGGTAGAAGGATTCGGCCAGCGACAG
GATATGCATCCATTCAATGACAACTTGCGCAATGATGACAACAACTTGGTCGAGGAGACG
GTCACGACGGGAAGAATGGCGGAGGCGAGGCGCACTTTCCCTAGCTCCGCTCGTGGTTTG
AGGCTAGAAACAAGCACAACTCGTTTCACAACCGTGCCATCGAAGTCATCGGGACCTCCG
AAAAAGCGGCGACTGAAATCGAATCAACAACTGTGGGGGACAACTGTCGCTGCTCCGGCG
AGGCAGACGGCGAGGGACAAGCTGACAGAGTCACATCGGGATTGAAGGTGGGCGGGCCGA
CGATGGCGACGTTGATTTTGGCCGGAATGTCGTCGGTCCGGTGACGAGCAGGCAAGATAA
AGGCACCTACATCTCCTGTAGGTGGAGATGTATATTTGCATCTCAAGGTTTGTATTTTAC
ATCTTCGAAGGCAGAGATGTAAATTTTCTTTGCATCTACATCATCTGTTGGAGCTGGATT
TTTGAACCTCTGAAATGCAAAAGTTAGTTATTTTTACATCTACATCTTCAGTTGGAGATG
CTCTAAGTAGCTACTTTAGATGAATAAAAGTCGATGTTCTTTGAAATCATATTCTGCAAT
ATCCTTGCACGGTTCTCATGCTAATTGTATTGTTAGTTTAAACTGTAATTCTATTGATAT
AGTATTCCTCCTTTTACGTTTTAATTAATTAAGTCCACTCCCAGGTGAACATGGCGCCTC
TCATTTTGGTTAACATTAAAAATATATTTTTTGTCACAAAAACTATCACTATAGTTTTCA
CAAAAACTATGTGAAAACCTCTTCCAAATACAAAACAAATAACATATTTTTTGTAGCATA
TACTTTATATTATGTTAGTCAAAATAGATGGTTAAAATTTGGCCCAAAAAGTGTCCTAAT
AAATTCGGACGGGGGTAGTAGCATAATGGCAAACACACTGGCAATATGGACACAAGCACG
ACCGAGATCCAGTTGATCATTATATAGTGATAGTAAAACACATGCTTTGTCATACAAGAA
CTACCAGAGGGTAAGCGAAATTCACTGCTTTGGCCATAACCAGGGCGAGTAGTTCAAGAC
AACCTCATTGGTACAGTCGCTGCAGCGCCCGCACTAGTCTTCCCCTTTCCAGAGATCAGC
AAACTCATCGGGCTCCAGGGTGTTCTCCATCTCGTGCATCTTCCTCCTCACCTTGGCCTT
CACCTTCTTGGCGTACTTGCCTGCCTTCTTCCGCTTCTCTAGTGCGCGAATCTGTTCCAA
ATAAACAGATCCATGGGTTTAGATGGGAAGGCATACATGAACATGGCAGGAAATGCTTTG
TTGCAACTGAACTAAATACATAAATCCTGGTGAACAGAGCCACAGGTCACATGAGCAGTG
AATCCTTTTTTCCCAGAACCACAACAAGATACTAGGAGCATGACGCTATTCTATTTTAAG
TTTGATCAAACATGATAGGTAGTTAGGTCCAACACAACGAGAACAGAATGAAGCAGTAAT
GTAAAAGGAGTTTATGTCAAAGAAATATAATGGACAGCATGAATTGAGTCAAATGGACAG
CAATGATGCATAAAGTGTACCTCGGTTATACCATAACTGATATCGAATGTCATTCTACAA
CATTATAAAAGTAACTGTGCACCCATGTTACCATCACTTGTCGGTGTTCTCAGAGTCAAG
AGTCAACTTTGTTCCAACCAAAGAAACACAAGAGAAAACAAAATATAACCATTCCATGAT
GATGGAAGAGGCAAACACCCAGATTTCCTTTACAAAGATGTTTGGGATATATGTACTCCC
TCCGGCCCCAATTACTTGTCGCTGCTTTACTACAACTTCAGTATAAAGTTGTACTAAGCA
GCGACAAGTAAGATGGATCAGAGGGAATGCCATAGTCTAGATCAACCGGTGAAAGCAATA
CCTGATTCGGAGACACATAGAATGGGTTCTCATACAATGTGGGGCCACCAAAACTACCAC
CAAATATTTTGATTGGATTCAAACAGAACCTGGGGCCAACCTACACACGACAATTTAATA
TTGATTAGCAACCAGAAGCCATATAAATTATGCAGATATAAGCTCACTCTACTTTTACCT
CAACAAGTGTCATTTTATCTAGGCCTCCTTTATCAACTTTATCAATCTCATTGTGGGGTA
CAGAAATCTGCCAAGTATATCATTTGCTAAAATTCAGATGGTGATAATAACTTGATCGTT
TTAAGTACTGAAAGTTCATCACAAATACAAATTCAAAGAGACCAATACACCACCTGGTAA
TTTCTGAACCAAATGTGGTCATCCACAATGGAGAAGACAAAGACATGATCATGAAAAGGT
TTTGCCTTCCGATGATCTTTTGGAGTAGCAAAAATCTGCAAGTCCGTCAATGCGCAATGA
GTTAGCTCTAAACTTCTTTGATTAAAAGAAGAACATGTCACCATATAATTAATTTGACCC
TATCGGAATGTATAATGACATCACTAATACTGATCTGATGACCTCATAAAACACAACTCT
ACTCCTTCACAGTAAGCAATGGAAAAATAAATATACGTTTTTTAACATCCAGAAGGTCCC
CCATTAACTTAGATCTCTTAGAATATATCTACAGTTATCAAAGGTGAATCCTTCCTTCGA
AGGTTCATATTATATTATTAACATAAAGACCAATAGTGGATGCATCACACCCACATGCTA
ATATATGACTACAGTGCATACACATAGGACTTTACCGTAAACACGTGTCAAAGTAACCAA
GTTTAACCTCTTTTCAGACCAATTAAAAGTACAGGGTAAATAAGAAGAAAAAAAAGATGA
TTTCACAATAACAGAAAAAAAGACAACATTAATACAGATAAATATGAGCTTTGTTTAAAA
ATGTTGATAACACGTGCACAGCATAATGTAACATGCCAAACCATCAACGTACTTGAGTTA
TCATTTCCTTCAAGAGTTTCCAGTGAGGTTGCTGGTCAAAATTTGAAGAAAACGTTAGCA
GAGGACGTGACCCTTTCAGATGGTTACCAGTGAGCTTCAGTTCCTCCATAGTGTGAACTG
CACATAAATTTTACAGGATGGTTGGGCATTAGTAGATGAATCATCATGGTAAGAATAACA
ACTGGATAACTACTATTGGTGTGAAAGCATACCAGCATTGACTAGAAATTTCACTGATGG
CCCTGCAGGAGACTTGACCATCCAAAGGTAAAGATCTTTCTGTTTTCTGCACTGCAATAT
ACACGCAAAGATGCTTCAACATAAGAATTGGCAACTCTAGTGCATATTCAGATTTCCTAA
TTTTGGAGCGATGTCACACTGACAAAAAAACAACAACGTGGAGCTAGCACCTTTTGAACA
TTGTGAAATAGACAGCGTGGATCACAAAGCTCAGTAAACCTCCATGGTTGACGCTAGAAC
AATGATATGGATCAGAGCTAAATCTGAAGTTGATTTAGCACCAGAAACAAAGTACTTGCT
CCATGTTAAACGCGGTATGATTTAGCAACCTTTAATGTTGCCATCATGCAGTTCTCCTAT
CAAAATAGGCAACCTTCATCCTATTGAAGGCAAACCATTTCCATCAAGAAAGCAAGCAAA
CAAGCAAGCGGGGAACGTGGCACATGCGTCATACCTCGAAAAAGAGGCAGCTGGAGCAGC
TCCTTAGCTCGACCAGCTCGTTGAGCGCGCTGCCCTTGCTCTGCTTGGACTCAACCTTGC
TGTCCTTCTTGGCGTGCGGCAGCAGCGACACCACGTTCTGCATCAGGTGCCGGTACCTGC
GCGCACACACGCAGACGCGTTAACCCAACCCGCGCGCCGAAACACTTGTTACAAGAGCAT
GTGTACGGCGACCGCCGCAGAGCTCGGAGCAGAGAGGCTCACCTGTAGATGATGCGGCGT
GAGCACGTAATGAGCACCTTCTCCTTGTTCCGGAAGAAGGGCCCCGCGTCCTTAGGAGCA
GGTTCGGCGGCGGAGTCCGGCTGGTCCTTGAACCCGAAGAGGGTGCGCTCCGGCCGCTGC
GGCGCAGAGTCGTCAGGCTTCTCTATGGCCGCGGCCGCGGGAGCATCGGAGCTGCGCTTC
CTCTTCTTCGCCATGGGGGGCAAGGCGCTGGGGCTGCGGCAGAGTAAGGCGGCGGCGTAG
GCGGCGGCGGCGGCGGCGACGCGGGAGTGCTTGTGGGTCTGTGGGCGAGAGGGCTTAACC
GTTGGGGTCCAATGCGCTATTTAGGTCTAGGTAGGTGTTTGGGCGTCCAATGGCGTGCGG
CCCAATCTACCGGCCCATGAGCTAAACAATGGCCTGTTTGGGGAGTCAACTCTGGCTATT
CACAATGGGTGCTCCTATTCGGGAGCCCCTAATCGGCGCTGCAGGCGCCCGATCAGGAAC
TGGCGCCTGCAGTAGCTCAGATTTGGGCCGGCCAATTGGAGTGACGCGCTGCCCCGCTCG
GAGCGCTCCTTGCTCCATGTGGTCGGTCGTTTCAACGATTGACTTTGGAAAAACATTAAA
AAAAAACTAAGAGTCTAAAATGGTTCACGAATTTTGAAATAGTTCATTTAAATTTTCGAA
AATTCATCAAATTTTAAAAAATCATTGGTTTTGGAAAATGTTTATCGATTTTGAAAAACA
TTGAATACATTTTGAAAAAAGTGGACCAATTTTGAAAAAAGTTCATCTATTTTGGAAAAA
TGGTCATCATATTTGAAAAGTATTCATCAAATTTTAAAAAAAGTTCACCAATTTTGAAAA
ATAGTTCATCGAATTTGAAAAGGGTTTATCAATTTTTTAAAAACAAATCAACGGTTTCGA
AAAACAGTTCATCAAATTTGAAAAAAGTTCATCAAATTTGAAAAAAAGTTCACCGATTTT
GCAAAACAATCATCGAATTTGAAAGAAGTCATCATTTAAAAAAAATAGGGAATTCGATGA
ACTCTTTTCAAATAGTTGAACCAGGTCAAAGAAAAAAAATCATTGAACTAGGTCAAAGAA
ATAAAAGAATAGGAAAAAAAAGAAAACAAGAGATGAAAGAGAAAGGTTTTTAACTAATCA
GAAGCTGCTTCATGGTGGGATGGTTGCGTGACAATTTCTCTATGCTCGAGGTTCAAGGTT
CGATTCGCAACGAACGCATTAAATTTTTGCGAAGAAAACACATGAGCCTTAATTTTTGCG
AATAAAAACATGAAGAAAACACATGGCCCTGCCCAGCACGAGGGCGCTGCACGCGCCCGT
TTGCAAAATTGCACAGTAACGGGCGCCTGTGGCGTCAAATAGGTTTCACCCTCCTATTCG
GCGCCTTCAACGCCGGTTAGGGAAACCGGCGCCTCTAGCGCTCCTTCTCATGGGCCGGTC
CATGTAAAAATGCATTGGTCATTAAATTTTTTAAAAAAGTTCACAAAATTTTAACAAGTT
CAGATTTGCAAAAAAAATCAATTATTATGAAAAAAATCATCGATTTTTTAAATATGTTCA
CGGATTTTCAAAAAAGTTCACAGAATTCAAAAAAACATTGATTTTGAAAAAAGTTCATCA
ATTTTTAAAACAGTTCACTGCTTTTGAAAAAAGGTGATGAATTTTAAATTATGTTCATCA
ATTTTCAGAAATATTCGCTAATTTCCAAAAAAAAACATCGATTTTCAATAAAGATCACCG
ATTTCAAAAAAAAGTTCATGAGCTAAAACAGTTCACGGGCTAAAAAAGTGCATGAAGGAT
CTCTACATGGGCCGGCCTATTACGGAGCGCTGCACGCGCCGGTTAGCAAATTTTGCTTGT
AACCGACACCTGTGACGCTAAATAGGGTTTGCGATTCACAGTGATAGAGGCATTACCGGA
TGAGATGTTCATAAAAATGACCGTGGCTCTGTGAGCCATCTCGAAGGAGAAAAGGAAGCT
CATCCACCAAGGAATCAATGAAAGCCCTTTATCGACTCATTTACTGGTGACATATTTTAT
TGAGAGTTAGCTGAAATTGATCGCCTAGACCAGGTGCAAGCTACTAGAATCAATATTTTT
GGGCACCAAACAGGGGAGAGTTGAAAAAACCCCACCACCTAGGAAGTACAAGATCAATGT
GAATGCATCTATTTTGAACCAAGGTCGTCTAGATACAACATGTGTTGTTTGTCGAAACAA
ACATGGGGTATACATGGGTTATTCTGTTTATGTTATTAGGGGATGACTGATCTTACATCC
CTTGATCTTACATCCCTTGAAGCGGTGGCAATGTCGTGAAGCCCCCTCTCTCTCGTAGAA
GACCTTGGGATTCAGCAAATAAATAAATAAATATATATATATAGAGAGAGAGAGAGAGAA
ACTCTATTCATCATCCAGGGTGTAGTTTAAATTATTCCTCATCTGAGGTAATTTTACGAT
CATTTCATAAATAAATTAAATTTGAAATGCAAATAGATACGTTTATATTGATTCATTACG
AAAAATTTGACATAAAAAAACAAAAATATTGGTCATAAGACCAGAAAAATCACATTTTAT
GTATAATTTACACTATGTTTTTATGTTTGTAATTTTACATGATAAAAAATATTTTTTACG
ATGACTATGTATTTTTTTACGGTCTCTTTTTACGTATGAGATAAGATTAAAATTTCAGAA
ACGTAAAATTACAATGTATTGATGTGAAAATAGAGGCTGGTGAAGAATAACTATTACTCA
CCCAGGGTGACGAATAGCGCGACCCTATACATATATATATATATATATATAGGTAAAATG
TTTGGGGCACCTAGGTACCTGGGCACCTAACATTTAATAGTTTGTATGTTAATCCATTGC
CATTTATTGATTTGAACAGAATTAAAACACACATTAATTGAGAATGAGAATCAAAAAATA
AAAGAAAAGGGATATACATGTTTACATGCATTTTTTCAATCAAGGTATACATGCATGTAC
GCATAATGTGACTCGTAGGTCAATGAATCTTCTACGCATAGATGAATACATGTATACACA
AATATTGATTATTTCATTAGGTATGCGAGAAAAAATATTTTTATTATCTAAACCAAACAA
ATTATGCATCGACTTCAGATTGTAGAGATATACCCAGTATTTTAGGTTGTACCTTGTAAA
AAATTATATACATATGCGGATATATATGTATGCCTACTAACGTAAGTATGTACGTACGTA
GATATGATATACCTACTAACCAAATAATGTACCATGGGCTAGACTAAACATCAAAGATCA
ACTCTTTAGTTGACAACTCCGTCAAACGAAGCACGGAATCGTAATAACTTCGTA