Contig Data
morexGenes
Links



Map Locations of contig_54357 (4702 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_54357

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_68188 1 394 bp MLOC_68188.1 Available Available None





CDS Structure of MLOC_68188






Contig Sequence (4702 bp)

>contig_54357 4702 assembly3_WGSMorex_rbca.fasta
CAATCAGGGCATTTGGTACCGAGGGGAAAGTGAAGGGCCTGAGTATTGTTCTTCCGATTG
AAGTTGTTGAACCTTGTGATGTGCCCCGGGAACTCGCTTTCTTTCAGCATCTTAAACAAA
GCTTTGAATACTATGCTAGCAGTTTGTAGTTGTGCTCTGGATACATGTTCCCTCATTTGT
AATAGACATTATTTTTCTTTGTTTCTACATTAATTAATGGATCTAAGGTAGTTAGACGCA
CTCTGACTATAGTCAATCAGTTCTACTAATGACATGAGTGGCATAAAGACACATGTGCTA
TTGATCATATCCAAAAACAATGAAAAAGGGCGCCTACAACCTGGCACCGCACAAGCTCCT
CTCAGGAGGCGCCACACGGTGATGCCCCAACCGCTAGTCTACTACCATTTTGTATCAACG
ACGACGGTTCCTCTTTTTTTTCACAACCTCGTCGATAATGTAACTATTATTTTCAATAGA
TATAAAACTTGCCATGATGGTTTTCTCTAAAAGAAAACAGGAGGAGTTTTCTTTCCTTTT
CATAGGGAAGGGGTTGATAAACCCATAAGGGTATCTCCAATGCCGACCAGCAAACGTCTC
GCAACCTTTCAGATCGTATTGTCTGGACCGCGGAAGCCATCCGACGCAGTCCTATATCGG
TCCGCGGAGCGGTGCAGTCGTGATTTCTCCCGTAAATCGGCACAAATATGGTGGAGGGGT
ATTTGTGGGAGAGGGACCACTTTCAAGCCCGATTCACACCATCGTGGCCCATCCAAACCC
CTCACCCGCCATTCCCGCACTATCCATCCCACGCCACATGTCGCTTGCCGCGCCGTATTC
ATGCCGACCCAGAGCATGCAGTGGATGTCACTCAAGCCACAATTTGACCGGATGTGAAGG
CGGCGCAAACTGACGTGACCTCTCAGGCGTCGTTGCAGCAACGCGTACGCCGCGTCCCAA
GAAACCAAATCCGACAATTGCGCTGCATTGAAACAGGCTAACCGCCTCACCGCCTAGCCT
GGCCGCGACTATTGCAGACGCCTTCTGGCCCCGTCCAAAACGCCGCACTGTCCTCCTCCC
CCTCGTATTTCCTTCTCTCCGATCTTTACATCCACTGTGAGCCTATCCAACAATGATTCT
AAAGTCCAGGTTTTCCACGCCAATAGGCCGTATCGGTGGGAGGTCGTCGTCTGGCGGATC
CCGCCGCCCTTCGCTCACCAGGGCCATTGGCATCCATGACAAAGGCCTCCTTCGAGAAGG
ATGAGATAGTCATATCCTCCGACTACGAGGAGCAGAAGCCGCACGAGCAGCGACGTCTGC
TATCGAAGGCGGCTATGACAGATGAAGAATTCATCCGTCAGAAGGAGATCATGACGGAGC
ATTCGCTCCTTTAGATGGGACCGGCGCCACCAACATCAGTGCGCATGAAGGAGATCCATT
GTCCTCGGCGCGGGTCTGTGTTATGCACAAGCCGGCAACCCTTCTCAGGCAGGTGAAGGA
CAAGCCGGTGTCCTCGCCGCGCAACCGTGGCCTCCACATCGACGACCGCTTGAAGCAGGA
GCCCGTATCCCCAGCAGCTACGCGCGGACCAGCGGGCCATCCTCGCCACCTCCATGCCAC
CTATGCGAGATAAACGAGGTGGTGCCGCCCACGATCACCAAGGCATGTGACTGCATCCTC
CGCCACCCGGGATGCGAAAGTTATGGCGGTACCTCCGGCTCTCGGTCCGTGGTGTCCGAG
GCCAAGCGTGCGGTGCGGCAGCACGCGAGGTACGACAAATGCAATGTCGGTCGCCGCTTC
ATGTTCGCCAAGACATACATGGCACAGAAATAGCCCCGTAACGACCCGAACCATGTTACG
GCCTGGGCGCTCGACCGCTCCGTGACCACTGCGAAGACGGACGCCAAGCGTCGCCGCCGC
CTTGACAACAAGGTCACCAAGATCGGCGAGGAGTGGTCACTTAGAGACGGCTCCGCCAAC
GTCGGTCGTGACAAGGCCGCCATCAGGGCTCCGAAGGCCACATCGACTCTGGCCGCGACG
GCACTCTGCACGACGCAAGAGGATGCGGAGCGGCTCCTCCGCAAGCGTCACGCACTCGTC
GGAAAAGGTGCCATGGCCCTCCGACTTTGTTCCGCCCGTGGAAGGACCAAGATGACGACA
ACGAAATTGGCACGTGTGGTAGTCGAGGCGGCCACGCGTACGAGGTGGTCATCCGGTATA
GGGTTTAGATTTCTCTTTCTATTTTTTAGCTAAACATTGAAATGTCAATCTTTTTATGTA
AATTATATCTGAACTTGAATAAAATTCATCTGGTTTGCATGATTTTTGTCTAGTTGGTTT
GAATTGTTGGTCAGATATATGAGGCTAGCGTTGGATGTCGTCCTCTCCATCCTTGCCCAT
GGAATGGTTCCCTTGTCCGTGGAGAGAGGCGGGAGAAATTTGTAGGTTAGAGCATCTACA
ATCGGACCCTCATATGTGTCTCAAACGGGCGGACAGGCCGTACGGTTAGTGACCCTTAAA
AACCTAACCGGAGCCCTAATACCCGTCTCAAACGCCCGGACTGACCGACACCCCTCATAT
CTATCTCAAATATGAGGATGGTATGAGCCACGCACGCCCAATCGGTCCGTCACGTAGGAC
GCGATCCCATCCCGAACCATATTTTTTCTTTTTTTATTATTTATTTCCTTCTCTCTCTTC
TTGTCCATCAATCATGTGCAAGTGACCGGACATAAGAAAATATATATGAGAAGTGTGGCT
GCACACACGAAAAAGTAGGGCTTTAAGCATCTACAGCCGGACATACCCCCTAAACGCGCA
TGCATGAGCCTGATCAGTGACCGGGTGTGTCCTTATTTGTCTGTCCGCGTAGCTACATTT
CTTATTTTCTTTCTCATATGTCCGGTCACTTGCACGTGATGAGGAAGAAGAAGAGAAAAA
AAGAATGAATAAAGAAAGAAAAATGATATATTCTTCTTATATTTGTCGTCAATATAAGGG
TTCGTAGACACAGACCAGTCATGGAAAAATGATATGAGGATCCGGTTATGTCATTTTTCC
TCTTTATATTGTCTGGTCACAACTAAACACGTTCGCAAACGCATCAGAGATCGTTTGACA
TGTCCGGTTATAGATGCTCTTAAAACCAACCTTACGCATCTGCAGGCGTGTAGAAATCAA
AAATCATATTTTTTAAGTCCGACTGTGGCCCTGTTTGGATCCATAGACTAAAGTTAGTTT
GAGCTAGTTTGGGTTCAACTAGCCCTAAAGTATCCAAACACAAGAGTTAGATTGGAGCTA
GTTGCATCTAACCCACCTAAAAAAACTAGCCCACCCAAGAGGTGCTAATTGGAGCTAGTT
TTCATGGAATTCATTAAAAAATATTTTTCTCTCTCTCTTTCACCAGCCAAGAGATGTTAA
TTGGAGTTACTTCTCATGGGACCTATTAAAAATCACTTTTCTCTTTCCATAAAGTACATC
TATTGTCAGTCTAACCCTTCCATCCAAACACCTATTTGGTTAGAGTTAGTTTAGGATTAG
TCATGAGTTAAAAACTAACTTTAACCACTAACTAAGCTAGAGTATCCAAACAGGGCCTGT
GTATACTCTTACAGTTGGAAATGCCCTAAGCCAACAAGGCCGGCAACTACCTCCTCGTTA
ATCCATCACCCGATAAAAAGAAAGAAAGAAAGAAAAAAACCGTCAGCATAGACACACTTT
ATGCCACGGTTATTTCTTGTCAGCCTCCATTGATGTGATAGCTTCGGTTCCACTAGCGTC
CATGAGAAGTCCCGAGAGGGCTGTCAGATCTAACAGTGAACGATCTAAACCAGCTTGCGC
TCGTGTCGTGTCACATTGCTTCCCACGCGTGCATGCCCCATGCATACATGCATTCGGTCG
ATACGGAGACACACCCACCGACAAGCCGCGCCACTGTGCATCCGTCACCAACCGCACGCA
CTGCTCCACGCCCCTCCGGCGCCCACCCGATCGGAGCTCCCAGATGCTGCCGCACCGAGC
CCTGTCCCGGCCGGCAGCCCCGCCAGTCAGCCGGGCCACTCATTCGGTTCCCTTCCCGCA
CCTGGTCACGTTAGTAGAGAACAGACTTATGTCGTTCCCGCCGTGCAGGGTGCGTACTGC
ACCGCCGCGCTGGCTTAAACCCCGGCGTTGCAGCCAGCAATGCGAAATCGCTCGGGTTAC
GTACGTGTCGCATGATCCCCGCCTCACACCAGCCTGCAAATTTTCAGGCAACAGCGCTAC
TGCAGCGGCTAACTGTTGTTGTGCATGCACGTAACGTAACCCCTATGCTCCTTCACAGCA
TCTTTAGCACAGAAAAGCTAATTAAACCGCGCGCCTAAAAAATCAGTAATATAGTATATG
TACGGACGAAAGCATCGCTCCCGCACACATGCAATAATGTCACCCATGAGAAAAATAGCG
ATCGTGCGGTTGGGTAAAACTCGCATGCATTATATTTGTGCGTTGGGTAAAACTCGCATG
CAGTATATTTGGTGCATACGCTCGTGCGCTGGACAAAATGAATTTTGTGTGAACCACCAA
CCGCCATATCTGAAACCTCCGGGCACCGCCGCCTTCGCCCGTTCCTCCCATCGACACATT
TCCCCCCGCATCTCCCAGTGCGCCGCCGCCGCTTGTTGTACCGCTCTCCTCGCCGTCGCC
GCTTGTTGTACCGCTCTCCTCG