| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_54249
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_68124 |
1 |
652 bp |
AK374641 |
Not available |
Available |
None |
CDS Structure of MLOC_68124
Contig Sequence (4631 bp)
>contig_54249 4631 assembly3_WGSMorex_rbca.fasta
TGTGCTTCTATCCCTGTCGAGGCCCTAGCGCCAAAATGAGGATAGGATCGCATCTTGGGT
GTTACAAACCGTTATTTCAACTCAATAAACTTCAAGTTTATCTAAAAAACGTAAGGGGAC
GACCCCCCCTCAGACACAAAAAGTCGTCGAGAAGAGCAGAGTAGGGGAGATGCGTTCGGT
TCGGACAGAAGGACCAATCCTTTTGAGCTCAGATGTGGAAATAAGCTCCTATGAGAATAA
GTTGTAAATAAGCTCCAGATAATAAGCTAACCAATTCTTTTTGATATGTGTTTTTCAGCT
TATCTGTAGTATGGTTGATGAAAAGTCTGTAATACCCTTGCACAGTCTGCCCAAAGCACA
TCGATAGCAAAATTTAGATGAGCTCTTCATAACAAATCAAGGAAAAATTACATAAAAACA
TCATTTATCATCAACGCCTAATAACAAATCAAGGGAAAATTAGCAAATAATCATGGATGA
GCTCCTACACGCGCTCACAACCATAGAATGGGAGGAGAAACGATGGGCCGCTGTAGTGGA
GGGTCGACCGAAACGACGATGATCTACTGCTCATGACCGGCGGCGGAGAAGAGGAGTGCC
GGTCGGAACGACTAGGATGTACTGCCAGAACGACCGGAGAAGAGGAGGCTGGGACCGACG
ACGGGGAGCAGAGAGGCCGGTACCGGCGGCGGGGGAGAGGGCCTCGTCGAGGAGGTGCTG
GAGCCAGGGGCTGACGGCGACAACAGCGGCGTGGAGAGGAACCCTAGGGAGCGAGGGAGG
GAGAGCGAGCGGAGTAGGGGTCGAGCGAGGGGTGGCTGGCTAGTGATAGTTTCACTGTAA
TTTCTTTAAAAAACAGGATCCCTTCACTTTACCCCTTCCAGGTTAACTCAAAAGTTACGG
AAAGCTTCTTACCCCTAACTTTTTTTCATTGCGAAGAGAAGAAAGATAAAAATAAACTAA
GCTAGCTTATCACAAATGATGAGTTCTTTTACACTTCTAGTTTATTTTGACAATAAACTC
AAATAAGCTCGAAAAGAACTGGGCCGAACGAGGGGATCGAAGCGGACGGGAGGGGGGGCC
AAAAGCTGCGGAACGAATCTTCGCTTCTATCGCAGAAAAGCTGCGTCTGCGCCTCTGCGG
GGCGTGGAATGCGCGGCGGCGGCTGCTGCTGTGGGATCTAGGGCGGCGGCAATGGGGGTG
CCGCCGTGGGCGATCTGGGCGCTGCTGCTGCTCCACCCTGCCGCGCGCGTGCTTGCAAAC
ACGGAAGGTTCGCTTTGCTTTTCTGGTTTGCTTCCGTTGGAGGTTCTCGAGGCTGGGCTT
TTGCGAGGCGTTTTCATGCCCATTTCTGTCTCTCTCGGTCGAGCAAACTTAAATCTCCTG
CTTCAAGCCCAGGGCGGGCACACAATCAATCTGGGCCGATTTTGACCGGAAATCGGAGCG
GATCCTCGTCGCTAGTTTGCTGTGGTTTTGACATTTATACGTTAGAGAACCCGACAATGC
TTGGGGCTGGGATCTCTGTTTTACGTTTTGCTTCAGAGGGCTACTGATATGCTTGCGTTA
GTTTGCTCTGCGTATGTTGCCCCATGACCATGAATATGATCGCTTATGTGCCCATCTATC
TTATCTGCCTTGCCAACGTTAGTCTAGTCGTGGTCGTGGTTGTTAGGGTTGATTAGGACG
TTTCTACGATGTGGTTTTCTTGTTAGATTTTTCTTTTTGTTTCTGAAAGCATTTTCTTGT
TAGATTTAAAATCATGGTTTGCTTACTTGTGCGCACCTTGATAGATTTCCAGTTGCTGGC
TGGGAGATTTTCAGGCGTGCTCCTGCGAATTATTCGTTTGCTTCAGCCTGATTGGTTTAC
CCCGGGATGATTAGGACATCCCACCGTGCACTTTTGTTGTTGCCTCAGGGTGATTTTGCG
TTCGGAGTTCAAAATGATGTTGCTCTTCTGGGCTTCAATCGGCGCATTTTGATGGCCATT
GGGCAATTCTCTGGTGGTCCTCCAGACCAACTTCCGTTTTTTCACCTTACCACGTGTGTT
TGAACGTTTTGATACTTCATGTGGCTCTTTTTTGATAAACTAGAGGGCGTTTCTTGGTCT
TTCAAGTCATTAGTGTGAACCGGAAGCCTAGATCACCTAAAGCTTGATGGTGATTGCTTG
TTCGACACTGCACTAGAAACCTTAACAGCGACCAAGATGGCACTGCAGCTTTGGTTACTC
ATGCCATCTGTTGATACTTATGTGTCTCTCATGTGCTGTTTATTTGCTTTTAGGTATAAA
ATATATTATGCTAGTTTTTTCCACACAACATAATACTACTAAAGGTCAATATAATGAAAA
ATGTGGCAGACTTATGATGATAGAGCTGTCAGATTCAAGATGAGCATGAAGGGAATGCAA
GCTGGCATTTTTGTTCTGTCTATTTATGTATGATATAACCTGGTGATTGCCCCCCATGAA
AGATCATATTCACTCTACATAAGGAATATTAGGTGCTAATTGTGCTAATGCATGCTGTAA
CTGGGGTCATGTTGTTCCTCTTGGGATGACACGATTATCTCATTTTTTGTAGGATGTACT
GATTATTTGTTAGTTAAATTTTATGTAGGAATTATTCATTTCTCACTATTATTTACAGGT
GATGCATTGCATAGCCTAAGAACTAACTTAAATGATCCCAATAATGTGCTACAAAGTTGG
GATCCAACTCTGGTCAATCCGTGCACTTGGTTTCATGTTACTTGCAACAACGACAACAGC
GTTATCAGAGTGTAGGTGCACCTTTTTCTCTGCTCTGCAGATACACCAGTACTGTGTTTC
ATACTGAAGTTCATTGCATTTTTCAGTGATCTTGGAAATGCTGCATTATTTGGTACTTTG
GTGCCACAGCTTGGTCAGCTAAGAAACTTGCAATACCTGTAAGCTATCCTCTTTTTGCTA
AGTGCCTGCACACATACCATACTTGCTGATACCTGCATATATGAATGCATTAGAACATAT
ATGTATGCATCAAGACAAACATCCTATTTTGAAATGCCTGCAGACATACCACACTTGTTG
ATACCTGCATATATGAATGCATCAAAACATATATGGATGCTAGTAGTGTTAGATCATCAC
AAATCACTAGTTACTGTACCACATAGTACTAGATAATGTGAAAAGAAATAGTAAAGTTGG
ACTATGGATCATGATAATAGTAACTTAGATTAGTGCATGCAAGGGTGTTACATATAAGGC
CGGTGCTGTCAATCTAAATTATTGTAATGCGCCAGTGATCAGCTACTTTTGGGTCTTGGC
CCATAATTATTTTTATGCAACTTAGTAATAATTTTAACTTTGTGCTGCAGGGAGCTCTAC
AGTAATAACATCAGTGGCACAATACCTAGCGAACTTGGAAACCTCACAAATTTGGTCAGT
TTGGATTTGTACTTAAACAACTTCACTGGTCCAATACCCGATTCATTGGGGAACCTATTG
AAGCTACGATTCCTGTATGCCCCCATCATTATTAGCTATACTACCATTATAAATAACAAG
ATGTTAGGTGATCTGATCATTCTGAAAGATGCACATGTGCATATTTTGTATAGATTGTAA
TACGAGGTACTTAGCTCTATTGGACTAAAATGAGATGCATTCTGATTTGCCTGGATGGAG
TTACAATTATGGCAGCATAAAACCTCGTGCTTAGAATTATGCTAGTGTAACCATGCAATT
TTATTCAACCATTTGAAGCAACTCCTTATGTGTTGTCATTGTAAGTATAGAACATCAACA
ACTAAAACATTGAAAAATGAAAAGAAAAGGTACTATGTGTACCCGGTGTAGGATTTAAAA
AAAATTGGTTTATGTTTGCCTGGTTTGGTCTTCACTGTGAATTTGTGTGCACATTATATT
TGTGCTCTTTGCTCTTTTCCAGGCAATGAATGGTTTGCCACTTGGCATTCCTTTTATGTT
CCTTAAGACAAAATGTTCGTTGTAAAGCAAGTTTTAAAAATATGGGCCGATATTTAAGAT
AATCGGCCAGTTAATCCTGAATCCGTAGGTCACGGATTCGATTGTTAGGAAATATGCAAC
TTGTATNNNNNNGAGGCCGTAGGCCAGTATATATACATGTACAGGTGTAGAATATGCAGG
AAACCCCTTATACAATGGGGTAAATAGGAAAGGTTACATGGCTATATATATAGTACTCTT
AACACCCCCTCAAACTCATGGTGGATGAACACTGAGTTTGGAGAGATAGAAGCCATGTTG
CGCTCTAGTTTGGGCCTTCATCAGAAAATCCACCAACTGTAACTCGGAAGGCACATACTG
AAGAACAATAACCAGATCCTGCACACCAGCACGCACATAGAAAGCATCAACNNNNNNNNN
NNNGGTGAGCTCATGCTTCACAGGATCACGTGCAATGCTAATAGCACCTGTACTGTCAGA
TAATAGGAGAGTAGGTGTAGTGGCAGAAACACCAAAGTCCTAAAGTAGCCACTGTAGCCA
AGTCAACTCAGCCGTCAAAAGAGCCATAGCTCGCAACTCAGCCTCTGCACTCGAACGGGA
AACTATAGTCTGTTTCTTTGTCTTCCAGGCAATGAGAGANNNNNCAAGAAAAACACAGTA
AGCAGAAAGTG
