Contig Data
morexGenes
Links



Map Locations of contig_54219 (5541 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_54219

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_68112 1 1436 bp AK248865.1 Available Available None





CDS Structure of MLOC_68112






Contig Sequence (5541 bp)

>contig_54219 5541 assembly3_WGSMorex_rbca.fasta
TGAAGGAGTTTTGGCAACATATCATACACATATCTCTTCACACCACAGGGTTTTTGAGGA
GCTCTTCAAGATGATGATGCTATATGAACAAGTGTAGATTAGGGGAGTGTTAGAATTAAT
TAACTGTGTTAATTATGAGATAAATCTTCCCTTGTTATTTGTCAGGCGGTTAGTACTAAT
GCTAACCGTCGCATCTGTTTAGAACGGACTGCGTCCCCTCAACTTGTATATAAGCATCAC
TATCAATGAAAGAAAGAGATAGTTACATCATTTCTTTTATTTCTAACAATCTCAAAGATT
TCCTAGCTGTTGTGGTGGTGGCCATCATGACGGCTTTCTTGTGGTGAAGAAAGAAAATGT
ATGGTGAAGCAGCTTCATAGAGATAGGATAAGGTTGAGGAAGAGGGAAGCGGTGGACAAC
CTGATGCAGACACGTGCCGCTAGGAGCACGAGCCTTACGAGAGAGAAAGTTCAGCCGTGT
GATTTTAAAAGTTTTCCTTTATTGCCATGCATTACACTGGGTAGATTCAGGGTTTGAAAT
CACAGTTTATCTTTCCAGTAAACGGCATGCGTATCACTTTCAAACTCTGCGCAACTCTAA
AAATAATTCTTGGGTACAGTCTTGGATTACTCTAGTGAAATCAACAGAAACAAAGTGGAC
GATACACAAGTCGCCATATACAGTAACATGCAGTTCTAACCTCGGCCAGTCGGCCTGCAG
GCCAGCTAACACAGGTAGTATATTCTTACACAACGAATAAAATGCCGATTCGAGTATGAC
TATCCAACCAATGCCAAAGCGATGTAAAACATGATGACGGCCATGTCTCTTCATGGGAGC
CAAGTGAAGCGATTTACAGGAACACGTCCTTCTCAGAGCAGCTTGAGGACCTCATCCTGG
TTGTTGAGCTTGGCGACATCGATGGGCGTCTTCCCATCCATGTTTTGGAGAGTGCTGCGG
GGCATTGGCGATGGTCAAATAAGCATCAAGGGATCAATCGTTGTGAAGGGCAGGAGAGAG
TGAATTTAACTTACACAGCAGCGCCGTGCTTCAACAGAAGATCCACACATTCTTTCCGGC
CATAGCCAGCAGCGTAATGCAGTGGGGTGTTCTTGTTCTTATCCATAGCATCTACTGCAG
CACCAGCCTCAAGGAGGATTTCCGCACACTTGAACTGAAACCCCAAAATTCATACAACTC
CTTATCACTGAATTAAAATACCTAACAGATATCAAATATAGAAGGAGACTATACAGTTAC
CAAATGCATCTGACCCAACTCACAATCTAGATTCCACAATGTAACATAGACCACAAACAA
CAGCAGATGATGGTATGCCATTCATTGAGTTTGTATTCCAGCTCTAAATACAACCTTCAC
AAGTGAAGTTTTTTAAGTGGCTTCCTAAAGACCATCAACTGGAAGACTTTGAACAGCGGG
GTATGGAAATTTGCCAGACAAGTTATATAGCTAAGTAGGTGGCCCTTGGCCAACTGGTCA
TTACCAGTTCCTTGCAAATTAATGATGATGGTTCAGAAATATATATCACAAATGTAAGAC
GTTTTGACGGTTTAATTTCGACTGCCAAAATGTCTTACATTTGTGGACAGAGGGAGTACT
ATACTACAGCTTGACCCCTTATAGAGGTCGCTAGGCACTGGCTGCTCATAAATGAACTCG
CAAAAAATGAACCTTCTTCTGACAAATAAGCATAATAGGAATGTTCCTTAGCTGTCCGTT
TTACCAATGAAATCATGGCACGTGCTTAAAAGCAAAAAAGGGAAGAAAAAATAAAAATTG
TATAGTCTGTGAAAACAACTTAATCTAAAGATTGCTAAAAAAAGCCTAACAATCTGAAAA
CTGAAATTGCATATTATAGTCCCAGGCAAGCTTATTATTCTCGCACAAAAAAGCTCACTA
TTCCAAGCCCAGCTGGTTACTGAACAGTAACTAGAAAACTTCCGCTAGTATTAGGGTCAC
TGGTCACTGGTCACAACATAATATTTGCCGTCTGGCACAATGAACTTACACTAGAATGCA
TATAATTTCTCAAAGAGTAACTACCATGGAGCTCCCAAGGAATTGGCAACTCAATATATG
GAATGGTTTTTCTTAGCTTGCCTAATCATTTGTTGTAGTAATAAAGAAGTAGAAAAGTTA
GAATCAATCACAAGTTCAATTACTGGATTGCTGTTACAGTCTAAGAGAGTTTAGCAATGA
GCAGGTCTTCATACCTCACCATATCCACATGCAAAGTGCAAGGCCCTTCTTCCCTCAGAG
TCTTCTTCATCCTTGTCTGCTCCACCATCTAGAGCCTTCTTTAGACCCTGTTTGTTGACT
TATTTGTAAATAAATGCTCCAATGGCTATGCAATAACAAATCCAATAGAAACAACAGTGA
CAGCCGTATTTGAAAATCTAGAAAACTTGTTTCTGAAAAAAGCAATCATGAAGACTGTAA
ATGAAGGTGTTCAACTTCTAGTTGAACCTTGCATACATCTTACTATGATGTCATCCTCTT
TGCGATCATGTGAAGCATGAACAATGGGCACACCATTGCAGGCTACACAGGAGAGGCCAA
AAACCCATGTGCAGCAAGAATAACACATAATTCTGCAAGGCAGATGCAATGGAGGGCACA
CAGATTGCAAGGTACCAAATGTCTTGAGCATATAAAGAGCATAAACACATGCCAAGAGTG
AAGAGCATGTCATTTCTCCAATTACCGACGCAAGAATGGTTCATGAATTGAAAAGCATAT
ACATAGTGTCATAAAGCAACATTGCTTGCACTAATATCATCTAAACAATACCGTAAAGAC
CTGTAGTAAGTGGTCAAAATAGACACTGGTAAGCAAATTATACAGTGTAACACCAACATA
ACACATAACCATATGCAAGTATATATCAGCTCAAAAAACAGAATTTAAATTTGAATCCAT
AGTTCTATTGTTAGCCCCATTACCTCACCATCACCAACACTGGCAGTGTGGTGGACAATG
GACTCATCTTCATCTTCACCTTCTTCTTCAGTTTCTTCAGTACCAGAAGGCTCAGCAGTA
GAGACAGTGCCAAATGGCATGGTGGTTCCCATTGCCTGGCCAATCTTTTGAAGAGTTTCA
GGGTCATTCCAATACCTACATGAGCAAATGGAAAACATATCAAACAAGTTATATACAGTC
AAATATGATATATTAATAGTAAATATACCCTACTTTATCATTGCAGCAGGACCACCATTC
TCTAACTCATCAAGAATTGGCTTCAAAGCTGGATCTTCCTTAATACGAGACATGCGCTCT
TCAAGCTCCTCCTTATGTGTTGGACTGGTCAAGTTTTCCAGCATACTGGACATAGCAGGA
TCCTGAGCCAATTAAGTTGAGTAGATAATTAGGGCACTGGCAACCAAATAAACAGCATAA
AACAAAAACCAGAGAAGTCCTTTGGGTACCTGCATAAGAGCAGTCCCGAGGCGTTCTGCC
ATTGTCATGAATTGAGGGTTTTCCATGACCCTTTGCATTGTTTCAATGTATTGATGAGGA
TCCAATGGAGGCATGCCCTGTTCTCCTGCACCCTGAGCACCTTTCTGTAGCTGCTCAGCC
ATCTGATTGAATGCAGGGTCCCTTGCAATCTGATCTGCCATCTCCTTTATAGATGGATCC
TGGAAACCAGAATTCGTTTAATTGAAGTCAAAAGATATTGCTCACTAAGAAAAGTTAAAG
TGCAAATATCAATGAAGCTGACATGGGTAATAATTTTGTAGAACCAAAACAACACATTAA
TAATACACAGCAAGTGCATATTTAACTGATGAAAATCAATAGGAGAGTCAGCATGTACAA
GACTTATTATGATTGTGTTAGGGTGAGTGAGTGGGAAGGGGGGGGCATACATTGAGCAAA
CTTTGCATAGAAGAAAAATCGAAAGGACCCGACAAGCCTGCAGCGGCAGCTGGAGGAACA
CCTTGACCTTCGTTGGATGATCCTTCTGTTTTTTTAATTTTGCTCTCATCTGCAAAAGAA
GTGGTTCAGAACAGAAGCGTATATGACATAGTAAAGAAGTTGAGCAGAAGCACTGTGATG
AACTCTGCACAATTCTCAGATTTATTTACGAGAACGCAACGTTTTATATGTACCAACTAC
ATCAGATGGCAGGCAGTTAAATACACGAACTCCAACCTACATCAACAATGTCAGTCAGGT
GTATGCAACATTGTCAAATGAAACTGAGCCTTCTGTACTCCTGCATCTTTCTTGCTTGCC
GGCATGAGGATACGGGACGAAAGAACTAACATGGCATCAAGCATCTTGGTCATTTATTCC
ATTTAGCCGCGCTTTCTACTCCACAACGCAACACACACGAGAGTAACAGCCTAACAGGAA
TTGTCTACAACAAACCGCCTAACCTGAATTCTCTACAACAAAAACAGAAAACAGCCCAAC
ATGGGAAGATATGATAGGAGAATCAGTTGGACGGAACATTCCCTTCTCATCAAACAGTTG
CCGGACATTTATTTCCTCATCAATTAACTTGGGCCACTGCTCCGCGTGCAGGGGCGGACT
TAACGAGGCTCCAATTTTGTGGGAATCGAAACTGCTAGTGTTAGTAATTCAGGGTTCGAG
ACACCCTCAATAAGATTTCGATCCTGCACGCGCGCGCTTAAGAAGAAGACGAACCGAATC
GAGGCATGGGTGGGCGTACTAGTAGTCTAGTACTAGACCAGTACTCCACGGCAGAGCAAA
CAAATCCGTCACTAACTGGATGGATTGGAGAGACTGGAGCACGCGTGTCCTGGAATCGAG
ATTGGGCTCGATCGCTCACGGCGGGGGAGAGATCGGAGCAGATTAGAACAGGTAATCCAA
GCAAGGAAGGGCATGGCTCACCAGTGAACCCGGATGGAAGATCTCCACCCGACGCCATCC
CGGTAGATACGAGGAGTAGGGGAAGAAGAATTCGTCCGAGGTGGCCTGCTTGCGTCGGCC
GGAGGCGGAGCTCGGCGGCGCGGTGGGGGAGGAGAGAGCGCTGGCCAAGATGGCGTGCGA
GACTTGGTTTGACGACTACCACGCGAAGAGGGAGATGTGGCAAGGTATGGCGCGGGCCGG
GCCGGGCCGGGTAGATTCAGAGATACGTACGGCCAGGACCAGGTACCCAGGAGCCCGTTT
CTGGTCATTGGAATGGGCCGGCACCGTAAGCTGTGAGGTCCAAATGCTTTGAGAGTTGGA
AATTTAGCTTATAAGACCATGTGTAGCAGTGCCCTCAAACCATTAAATCTAAAATCAGTT
TTAAGGGTTAAGAATTGGTTATTTTTGACACTTTTAAGGGTTGAAAAACAGAGGTAAAGA
CTAGAACCCTCAAACCAACCTCAACCCCAACCCTTAAAACTATCATTTGGCATATCATAA
TTTTCACTAGCAAAACACAATAAACCTTCAAACAAACACAGAAATAAAGATCGTTGATGC
ATGGTTTAATAACTTTTACATCACACAATCATCATCTTCCCCCTCTCATCGGCACCATCA
CCAAAAAGTTGCACTTGGCGC