morexGenes - Barley RNA-seq Database

Contig contig_54210

Source Contig contig_54210

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_54210 (2508 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_54210

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_68108	1	834 bp	MLOC_68108.1	Available	Available	None

CDS Structure of MLOC_68108

Contig Sequence (2508 bp)

>contig_54210 2508 assembly3_WGSMorex_rbca.fasta
ACAATTATCATGAACTAGGAAATACAATAATAACCACTTTATCATTGCCTCTAGGGCATA
TTTCCAACATGTGTATCGCCCGAGGTCTCATGGATTTCCCACATTACCTCATACATAAAT
CTATGGTGTCTTGGCTGATTTTGATCATGTAAGCTCTCCAATATTGGACTATGGCCTGAA
GTCCCCGCCGTCAGATGTTTCACATTTGCATCCGGGTAACTCTCGCTCCAATAAGATGTG
GCTAGCGCTCGATCGAGGTGGACCCGGATAAAGCTACCACGAGCTACCCTTTTCTCAAAA
GTCCAGAAATGGCCTTGATGGCCGATATCCATCAACATGCAAACGTCCACGGCGTCTCGG
AATCCCTGGATTTTGGCATTGCTCCTTTCTCCGACACCCTCATGTTCATCCGAACGTAAA
CCTCACTGAAATGTCCAACACAAATCCATGGCAGGTTGTTGGAAGTGCTAATACCTTTCA
AAATGTCCTGCGCTTGATATCTGAGATGGGTTTGTGCCTCTCCGTAGAACAATGTCAATC
TCCATGGGGCAACCCCCAGTTCCTCAACACAACAATCTATGTGATAGACAGAATAGCCCA
AAATTTCAACTTTTATTGGATTGTTCGAAAACAAACCTAAACCTCCACTTCTACCTTGGC
TACTTACAGCGTAGCCATTATCATGGCCAATAGCTCGTGCTAAACTTTCCACCCTTGTCC
TTTCAATTTGAGTTTCAACAATACATAAGAGGCTATGGGCAAACATCTTCGCAAAATCGC
GAAGCTCTCGAACTGTCGCGACGTTGCCCGCGCCACGACAGTTCCAACTTAGGATACTCA
TTGTGCGCGGCGACACTCCTCGAGGGAGCCCGCCGATGATGCATTAGTGATGTCAATTTA
TCAGTGACCCCGCCGGCTCCTCCTTTGGACCTTTTTTGGCCTTTTATGTTCTTTCCTTGG
CGAAACATATACAAGGGGTAGTGGGGGAACCAGGGAAGGCTCCTCCCTTACAACAACAAC
TAGTTTCTTTGCCACATCGGCCCCCGCCATGATTGTTTCTCAAGAAGCCGCATTATTCTC
GACAGAGAGCCTCTTGTTTGACATCTGGTTGGGATCTATCACCCCCACTACCATCTGAGC
CATGGTTGGGTTCTCGACTAATGTCCCCTTGTCCCCTATGTGTGCTGCTACCTTGCATTA
AAATGCCAGCTCTGGTTGGGGTTATAGGGCTCACGACCTCTCCCTCGCCCCCCATCCATG
GTCCTCCCCTACCTCGTGGAGTGGTATTGCTTCCTTGCCTGGATGATCTTAGACGCATGT
TCTTAGCAAAGAGGAAGTGGCCCCACTCAAAGGTGGATTCATCATGTTCACCATCTCTAC
ACTCCTCATGCCAATGACCAAACTCATCACAATTGTAACAAAAAGGTGGGCAACTTCTCG
TATTTTAGTTGGTACTTAATCCTTTCATCCCCTTTTTTACGAGTAACAAATCGGTTGATC
TTGGCATTGGTGTCTATTTTAACCTTGACTCTAACAAATTCTCCGAAGAACCTGCCGACA
ACTTCAACTGAATCTCTTTCACCTCACCGATACACGACGCCAAGCCTTTTTACTGCCGGC
TCTATGAGGAATTTTTCCGGCAGCCGGTGGATTTGTGCCCAAACTGATAACTTGTCAAGC
TTGAACGTATCAGGGTTCTTGAAACCATCATATTCTTGCAAGACCATGCGTGGTCTCTAA
ACAGCCAAGGCCCCTCGAACATGTATTTCTTCGAGTCCCCCAGACACCAAAATTGAGTCG
TGCAGAGTTCCTCCTTGATCTTCCGCCGCGACACTGGTTTTGTAGTGTTCCAGGCCGCCC
ACATGTCACCGTACAAAGCGTTAGGACTGAAAGTTTTTGGGGTATGAACACAGCAATCGC
AAGCCACTTCGTCCGCTCCATCAGATCTGGAAGTTTCTCCTCCCACACAGTCGTCTTCGT
CCTCCTCCTGCAGGGTGAGGCGGGTTCCTCCGTTGTTTCTTTGCTGGATTTGTTCTGCGT
TCGAGAGCGGTCAGCCATCTCCACACGATCCAATCTTGTCACCACACGTCCCTCTCCTCT
CGATCAAAAACGTTGCCCCGAGTCCAAGGCCGGGAAAGGATCACAACGATCCCCTTGACC
AGCCCAAGTCCGGGAGTAGACATAGACACGGGAGGTTAGAAGGACGGATACCGAATTCCG
GGGGTGGCCACCTAGAAGAGATAAAAACCCTAAAAGTCTCGTGGTGGGCAACTCGGCAAT
GCATACCAGCCATTTTGACCAGCTCAGCTTTCCTTTTGCTGGCCCAATTACATTCCGCCC
ATTCCAAAACCACCAATTCGCAGAACAGCACAAAGCAAGCCAGGCAGGCATCGCAGGCGT
ACCTGCGAGTGTCGGAGGCGAAGGAAAATCTCGCTTCGTATAAAACAAAGCGAAAAATGG
AGGCATGAGCTGCTCCACACCTCCCCCTCTTCCGCTCCGCTGATCCCC