Contig Data
morexGenes
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Map Locations of contig_54147 (2766 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_54147

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_68072 1 494 bp MLOC_68072.1 Available Available LOC_Os02g21970.1, FRAME:+3, EVALUE:2e-22, 13102.m02462 protein 26S protease regulatory subunit 6B, putative, expressed
MLOC_68073 1 641 bp MLOC_68073.1 Available Available None





CDS Structure of MLOC_68072






CDS Structure of MLOC_68073






Contig Sequence (2766 bp)

>contig_54147 2766 assembly3_WGSMorex_rbca.fasta
GGAGGGAGTATGTATCTGTGCATGTACATTTTTGTTGTGTAATTGCTGGAATCCCCTTTA
ATATCCATCTCGTCGTTCTTTTTCAGATCACTGCTATTTGCCAGGAAGCTGGCATGCATG
CTGTCCGCAAAAATCGGTATGTTATTCTCCCCAAGGACTTTGAAAAGGGTTACCGAACCA
ACGTCAAGAAGCCTGAGACAGATTTTGACTTCTACAAATGAGGCAACAAAGTGTTGACAC
AACAGATGAATTTGTGGATAGTCAGCCTCTATGTGACATTAGTATCCTTGTATGTTGAGG
CTCCTGCATGCCCTATTCTTTTTCATCAGATACAACCATTTTATTTTGTGTTTCTACTAA
TTGGAAAAGTAGAAAGGGTGTGCACATTCTATCTCATGCTTGTTTTAAGCTACTTGCCTG
TCAAGTTTTGCTTGACCATTTTGCCATGTTGTGTACAGTCATATTTTGTTAAAAGACAAA
TCCGTCGATGAAAGAAGACTCTTTGTGAAATATGTTTTTTCAAAAATAAAAAACATAATA
AATTTTTGATCAACACACTGTAAAATTCTGTTTCTAAGTTCAAAAAAACCTGACGAATAT
GACTTCCTTTGGGAGGGATATGACTTTCTGTCGATGAAAGGACGACCCTTTGTGAAATAT
GTATTTTCATAAATAAAAAACATAATTTTTTTATTAACACAGTGTAAAAAGCTTCTACTT
CAGTTCCAAAAGACGTGATGAATATGACTTCCTCTGGGAGGGATATGACTTTTTGTCGAT
GAAAGGACGACCCTTTGTGAAATATGTTTTTTCATAAATAAAAAACATATTTTTTTTATT
AACACAGTGTAAAATTTTGCTTCTACTTCAGTTCCAAAAGACCTGACGAATATGACTTCC
TCTGGGAGGGATATGACTTTCTGTCGATGAAAGGACGACCCTTTGTGAAATATGTATTTT
CATAAATAAAAAACATATTTTTTTTATTAACACAGTGTAAAAAGCTTCTACTTCAGTTCC
AAAAGACGTGATGAATATGACTTCCTCTAGGAGGGATATGACTTTCCGTGGCAAGTAAAC
AAATACTGACTTCAGGAGATTGTATTAACTATACGGGAAAACTAATGTGCCAAAATCAGT
TTCTTTATGCACTTAAATAACATTCGAACTGTGCAACTCTATGCTTTAAAAAATACAAAA
TTTGTACACAAATTATTTAAAATAAACTTAATGAGGAGATGTAATAGTATACACTGGTTC
TTAAACAAACATGCTACTCAACACACGAAGCAGGTGGAAAACATCGAACGGCCTCGTGCT
TCTACCCTCTCCCTCTCCCTCTCCAGGATCACCTGAAGAGCGCCAGTGCGGCGGCCTTGG
CACAGCAGGCGCCGGCGGACGAAACGGCTTTCGCGACCCACCAACCCCTGGCACGGGACC
CCACCGCTCAGCTGGCTGACGATAGCGCGTCGGGTTGCCCTCCTGAGCCGCCGCCGGTGC
TGACCGGCTCAACTCATCAGCCGTCGGCGTTCCTGTTCCTGGGGCGACACCCTCATCGCC
GTCGTCGCCGCTCCTCCATCCCGGTTCGTAGCTCACCAGAGGCTCTCCGGCCTCGTTTGC
CGTTCCTGGGCGAGGCAGCGGAGAGGGATGCGCCCCAAGTCCGAGTGGTCTGGCCTCCAA
CGATGGGATGTCGAGGAAGAAGATGACCACAAGCGTGAGAGCAAGCGAAGGCTTCAGCAT
CATGGCTCGAGACTGCGTGCACAAGTAGAGAGGAGTGAGTGAGTGAGCGAGCGAGCAAGG
CCAGAGCTACGTGCTTATATACAACCCCGTACGTGCCGGCGGTTGGGGACTGGGCTGGGG
TTATAGAATGACTTATGACCATGTGACAGTTGAACAGTCGTGGCTCCTGGTTGGGTGAGT
CAAACCGCCCGCGCAGTTTGATCGATCCTTTGTCCGCATTATACCGCTGGAGCAAGGGGA
TCGAAGGCTGCTTTGGTTGTTCGGATGCCGTGCTCTCTGTCGCTAGCAACCAGCCACAAT
ATCTTTATCAAAAAAGAAAAGAAAAAAAAGAAGCAACCAGCCACAATATGCCTTCCTCGC
TCTTGACTGACTCCACCAATCATGCTAGCATTGCACACGATCGAAACGCATAGCGCTGCA
CGGATGTTTTTTTAGCGATAATAATAAGTAGCAGGGCGACCAGCTCCATGATTATGGTGG
AAGTGTTACCTTTTCTTTTCTGCAAATTGCTTGAAAAGCTGCTGGAGCAGGAGCGCAGAT
TAATAAAATAATAATTAGAGAAGCTTGTTTAGAAGTTAAAAAAAAATCCATGGTTCCGCA
CGAACTTGTGACATTTGGTTTAAAAATGTTGTGATTTGTAGGCTGTGCAAAAAATATATG
TGTTCCGCACGAACTTGTCAAATTTGGTTTAAAAGTGTTGTGATTTGTAGGCTGTGCAAA
AATAATAATCCAGCCCAACTTTTAAAACTAAAGGGCCCGTTTCAAAATACACATTTGTCT
TTTTTCTGTACGCCACGTATGAAAGCATAATGATGTGAAATTTCAAATTTTACACATACA
AAGCATATATGTGTATGTGTGCACAAAAATATATATTTTTTCACGCCCTGGAAAACTGAT
TTTTGAAAAAGAACTCCATGTAGCTCGAGCTCTGTTGGCATTTTCCGTTGTTGGCTTTTA
AACGTGCGTATGCAGCTGTACACGCGTGCCTACACGATTCTTGCTTCGGCCGGCTACTTG
ACGGAA