Contig Data
morexGenes
Links



Map Locations of contig_54113 (3370 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_54113

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_68051 1 1262 bp MLOC_68051.1 Available Available LOC_Os09g28120.1, FRAME:-3, EVALUE:0.0, 13109.m02770 protein OsFBX330 - F-box domain containing protein, expressed





CDS Structure of MLOC_68051






Contig Sequence (3370 bp)

>contig_54113 3370 assembly3_WGSMorex_rbca.fasta
TGTAAATAAACAGGTAGGGACTCGGGACTTATAAGTCCCTGTAAACAAACAGGTAAAGAC
TCGGGACTTATAAGTTGAGACTTAAAAAAGTCCTATGACTTATGAAACAAACAGGACCAT
AGTTAACGCTGCAGGTGCGGCCTGTGGACCCAACAGTGGAGATCAGGGATTTTCTTCATC
TGTTGTTGCTATGTGGCAAAGGGGATGGGGGCCAGTTGAGATGTAAAACTTTGGTAATCT
GGGCCATATTGCTACCAAGAGAAACTGTTTAGATGTTGCACCTTTTTTTATGTTTTTTGT
GGTGGTGTAAACCAATTATGACTAGAAAAATTTCAGGAACATGTATCATCATTTATTAGA
GTGTTTGTCTGCTGGATTGAGTGGGAGGGCTCACCTGGTGGGGCAGGTGAGCGAGGGAAA
GGGTAATTCAATGGTTACCGGCATTTTTCAAAAGCTTCGATATGTTAAACAGAGATATCC
AAAAACCAGTGGGAACTAGGAATCTAGGGGATTCAACGTGCAACTTGTGATTGGCTTGAT
GTAGTTATGAAATTCAAAATCAAAACTGGACAGCAACCAAGCAGTTACCGCCAACCCCGC
CAACCAAGCAGTTGGCACGAATAATAGAAGGAAAAATAATAGAGTGGAGTCATTTTGTGT
CTTAAACAGGAGTATAATTGGAACGCAAGAGATTCAACATCTGACATGTGACTAGTTTAA
TCTAGTTTTGTAATTCAAGAACAAAACTGAAATCACACCTTTTAGGTGGTTTCCATGCAT
ATTGTTAGAATCCAAGAGATTCACATTCAATATGTGTCTACTTTAATTCGGTTACAGAAT
TCAAAACCAAAACTGAATTCACATCTTTTTGGCGGTATCCAAGCGGTTACCGCCAAAAAT
TGACAAACGAATTAACTAGTACAAAATTAGGCAAAGAACTATTTTGTTTCGTAAACCAGG
GTTACAACTATAATTTGGGAAATTCTACACTCTATGTGACTGGCCCAGTCCAGTTGTGAA
ATGTAAAATCAAGACTGGCTCTACATTTGTTTTGTGGTAACCAAGCGATTACCAGCAATA
ATTGAAAGGAAAAGAATGCAAAAACAAGCACGACACTCCATTTGGATACTAAATTGGAGT
ACAATTGTACTTTAGGAAGTGCAATGTTCGTAACATGACTTATTTAGTTCCATTGCATCA
AAGTCAAAACCAAGAGCAATTTTGTTTCTTAAATTGGAGTGATGCCTAGGTATATATATA
CATTACTCTTTTGGCCCTCCGATTCTTTTTAATTTGCATATAAGATTTGGTCAAAGTCAA
GTGATACAAAGTTTGACCAAATTTATATCAAAAGATATCAACATCTATAATAAGAAACCT
ATATGCTATGAAAATTAATATCATGATGCATCTACTAATATTGATTTCATATTATAAATG
TTGATATTTTGTTCAATAAATTTAGTCAAAGTTTATGAAGTTTGACTTTGACCAAATCTT
ATATGCGGACTATAAAGAAACGGAGGGAGTACTAGATATAGATAATTGCCCTAGCAGGAA
GCATATGCTCATTGCAGACCATGGAGAAACGTACTAAATTCGCAAGTATCTAAACTGTTC
CAAAATAAACGGCCATGGAATGTAAAAGTCATCTCAACATACCAACTCTGTGGATCTAGA
TCAGTAAATCAATAAATAATGAAAAATAGAAAGAATCAAGTTAACACGCACATTGATGTT
TAAGGAGCTTCCAAGTATATGGGTCAATCAAAATAGTCTGAGTAGCAAGCTTTAGCCACC
AAACTATCTACCACACTTTGTAAATTACTCAAGATTAGTAAGGCATCCTCCATCAATGAA
GTGGACAATTTAAAAGCAAGGTGTACCATGAGGAAAAATGAAGTCCTCCCTTATTCAATC
AAAATTGTTTCAAAAAGAAGTTCTAGTCAAACTTGACTAGATGAATATCAATCAAGTAAA
CAACATAACTCCATACGTTACTCAAGAGGACTAAACAGGCATCCTCCGGTGACGACAACA
ATCAAAATCAGGGAATATATGGTAAAAAAATGAAGTCCTCAATCAAATTGACTGACACAG
GGTCTCCTTTTATTCAATCCGCACTTTCCTGTAGTTGATGTACTTGAACTTACATATCTC
CTCAAAGAAATCGTCAGCGGCATCATGGCAATTCTTCATCTGTGAGATTCGGATGACCAT
TGACTGCAGCTTGACGCTGTACTTCACAAGCGATTCAAGAGTGCACAGCTTCTGTTCAGC
ATTGAGAGGCGAGCGCACGGTGATCAAAAGCTCTTCCAGGCAAGGAATACAGAATCTTGA
ATCCAACTGCATCGACAAATCACAGGAATTAGCCATGGTCACAAATGTCATACTAATATT
AGTATGATGTTACAATGCAGCAATAAAGGGGGCGTGCCACTCACGTTTTTCAGGCTGTTT
TTCTGGCAAAGAGCGGCAAACATGGCACCATGGATCTCAAACTTGATGAGCTTGGGGTGG
CCGTTGAAGAAATCGACCAAATCGATCTCTGGGAACGGCTGGAGCACTTCAAAATCACCA
CAGAATTCAATCTTCATCACAAGGTGCTTCACCTCGCTCGCGCACTGCAACACCGAGCAG
ACGGCGGCCCAGCTCCACTGGACACCGCGCAGCGAGAGGTATTCCAGATCTGGGAGCTTC
CCGGTGTCCACCTTATACACCCTCCCTGCATATCATTTTCATCACAATCCACGACACGGT
TTATTGCATCCGGACAACACAATCTTGCAAAAGTTACGACGATGCGGGTGATTATTCGAA
ATCGATTTCGATTTCGGGGAACGCTGCGCACCTGTGCTCTTGGCGATCAATAGGCGGCGG
AGGTTGTGGCCGCCCCGCAGACTGATCCAGGTGAAACCCTGGGCCTCGAGCGACTCGAGG
CGGGGCACGGAGAGCGAGAGCGAGCAGTTGCTGCCGCCGAGGAAATCGAGGCGGCACCGC
TGGAGCATGGAGAGCTGGATGGATACATCGCCAGAGCAGTCGCAGCCAAGCAGGGACAGG
TCGGTGAGGTTGGGGCACGCGGCGATGGTCTCCGTGATGGCGGTGTCCCGCAGCGGCGCG
CCCACGATCTCCAGCACGCGGAGGTGCTGCAGCCGGCCCCACGCCGGCGCGCTGGTCATG
AGCACCCCCCAGAGCCTGAGCTCCTCCAGGCCCGTCGCCAGGGCGACGCAGTCCAGGTGG
CCGCCGCCCGCGGCGTCCTTGTCGGCGGCCGCGTCCATCCGTAGCTCGAGCACCCGGAGC
GAGACGCTCCGCATGGCGAGCCAGGCGGGGAGGCGGGCCATGGAGAAGGGGCAGTAGATG
ACGAGCTCCC