Contig Data
morexGenes
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Map Locations of contig_54088 (4722 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_54088

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_68036 3 4051 bp AK365090 Available Available None
MLOC_68035 5 2142 bp AK357150 Available Available None





CDS Structure of MLOC_68036






CDS Structure of MLOC_68035






Contig Sequence (4722 bp)

>contig_54088 4722 assembly3_WGSMorex_rbca.fasta
GCGGTGGTTCCTCTGTGGCCGCTGACCGTGGTGGCCTAAAGCCCCACGTCGCGTGCTGGC
ATGCGGCTCCCGCGCGTGGCCGCGCCCCTCCCCGCCCCCGCCCCCGCCGACCACGTAAGA
CCCCCCCCCCCCCTTCCTTGCTCGTCCTCATCTGCACCTACCTGCATCCAACTGGTGCTA
ACACAAAGATTCTCCATCCAAGAGAGACGATGTTGGAATCGGGGGCTCCTGGGCCGACTT
CCTGGATTACCTCAAGTCCTCCTTGTCCTCCGGCGAGGTGAAGCTGCTCTTCGCCGCCGA
CCAACTCCGCAAGTCAACCGGCATGCCACCCACCTTCCCGCTTCAAATCCCCCAAATGTT
CATTTCACTTGTGCCAAACATCACATGATAGATAATGCCATCTTTGCTTTGTTCAGGCTC
TGATGGTGCAAAGCTTGTGGCTACAAAGGCAAAGGGCCTGCCTCGCATCACCATTTCTCT
CCATACTGTTACTGGTGCTGGGACGAGTGATGTCATAGCTGAGTTCTCGCTAGCGCTCTA
TGGAGCTTATAGGACTACACAGGAGCTTGCATCCAAAGGTTGTTGTTGCTTGCTTTTTTC
TACACATAATTTCCTATCTGGTAGTTACGTTTGTTGCTGACAAAATATCAATTGTGACCC
AACTATATTCATATGTGCTATTTTATTTGTTTTGCAGAACAAGAACACAAGTCACAATTG
ATGGGGAGTCTGTTAACTGAAAGAGTAGGTCATCTTATCTCCTAAGTCCTAAACAATACT
TCCAAATTAGTGTTGTTCGTGTTGTTGTTGCTGCTGCTTGATGAATACAGTAGTGTAAAT
GGGATCATGAGTGTCATTCACGGAATCTGTGTATTTTCTTGTTAAACTGTCGAATAGTGT
TTAACAGAGTAGCTTAACATATTCCCATTGTACGTACAAGGTTTTGTTACTCGAAAGTCT
ACATGGCATGTTTTTGCACACTAAAACATGATCTGTGAGAGTTTACTGTCTACGAATGCT
TACATTCAGCAATTCATTCCTTCTCTCAAAAGCTTTCATGAAAGCTACAACATCTTGGTT
TCTCACTTGACACAGTTTTTATATAAGAACTCCATATATTGTTTGAGGTTCATTGCGATA
TGTCATTTGCATGTGCTGTTTCTTCTGAGTTACTAGCATGCTTTCTGCATAACAGCGAAG
CAATTTCTGTGTAGTTTTGTTTTGCTCTATATTTGGATATTGGGAATGTAAATTGCTGGG
ATGTTTGTAATAGTCTCATTTCACAGGAAAAGAATGAAATCATGCAAAAGCAACTTGAAG
CTCTTTCTTTCCTAGATAAAAGAAAGGCAACAAAGCCAAAGCTGCTGGCTGATCAGGTTT
CAAGTGTGTCTGCTGTGACTCTGGGCTCTGATCAAGTTACAGCTCCTGTGCGGCAGCAAA
TATCAGGTGATCATGCTTCTTCTTCTTCTTCTTCATGCAGAATTGCAAGTTAGGATATCA
GCTAATGGAATTGCAAACCTGCAGTACCTTCACCTAGTAAAGCCCCTCCAGCTAAAGCCA
CAAAGAGGGTAGCCCCCACGTCTCGGAGGTTGTGCGGCAGTCCTTGAAACACTACTTTGA
TGTGAATGGAAGTTTAGTACATCGGATAGTAGATTGGCTCTAATGTATGTTATTCTTTCT
TTAGGGCAAGGGTGCGAGGAGCTCTGCTGCAAGATAACGAGGATGAGGATGATAATTGAC
AAAAAGCTAGAGATGCTGATATCTTGGTTTAAGTTTGCCACATATGTGAACCTACAAAGA
GTGGCTTGTGGTTAGTCAGTTTTCTGTCTGTTTTAACTCGTCTCAAACTTGGAGATGAAA
CTAATTGCAGTTCATGGTATGAAAGTGCAGGACATAGTACATGCTATGATGCTAAGTCCA
TATATAATACATTCCTTATTTCCGTATACATCCGTATCTAGACAAATCTAAGACAACTAA
TTCGGGAGGGAGGAAGTAGTATATTTTTCCATATTTAGTGTGTCTCTCTACTCAACATAG
GTGGATGCAATGGCCAAAAGCTGCTCCTCTGAATATGTAGAGAATAGACCCCATGTGTTG
GGAGGAACTGAGTGACTCCTGGCTTGTGTTCTTGTGTGTCACTATTAACTGTCTGCTCAA
ACGGATGTATATGGAAGGGAGGGAGTATTTTTTCTTTTTCAGTTATGGCTTGCATTGACA
TGCCCTTGTTTTCTTGCATCGTTGAGTTTCAGTAATTGCGAACAAGTTGTGAAAGAGGAA
TGAGGAATGATTTTGTGCATGCATTCATCAAGTCCGATTTTGTGTTGTTTTAATTCGAGG
AACAAGAGTCAAGTAATAAAATGAAACATATTTATCAGTTTGCTCAAAGTAAACACTACT
TGATGAACAAATTCAACAACCAGAAAGGGAATTATGTTAAGTAAACAATGAGCTCCCGAA
CACGGGCATTTCAGAAGCAACTAGCCACTAGCTCCTGCTGGTATTCAGTGATGGCACCAG
CCTCGCCAGACACCTCATCTACAAGAAAATCTTTCTCACCTCATCTACAAGTAAATCTTT
CTCAGGAAATAAGGGAGGAAAAGCGACCAGGCGATGGCAACTTCATTTTGCAGAAGCTCA
TGTCAAGCTCACCATAGCTCCGACCGCCGTCCTCAGGCGTGAAGAACACCTTCCTTGTCG
CAACCCGGTCGCCACCAGCTGCTCCGAACTTTCAATAGAAACATGTCGTGAGAGCTTGAT
CGCGTCATTGGCAGCAACAAGACTATCCATGCTGGCGCTATAGGCAGTGAATCGGCATTT
GAACCCTTCTGGCGGCGATCGTAGCCTTGATGGAGGAGACTACTATGCCGTATGCCACCT
CCAGCGTGGTGTGCTTGCTTGTGTTCTCTTCCCTGCGCACGTACGAATTATTCCAGTGCC
ACTGATGTCCTCCCCTACCTGGGACCAATTTCAACCGCCCGAGCTCTAGTGACCTTTCAT
CCCAAATGTGAATCTCAACCAGGAAAGCTGGCTTTGACATTTGATTACCGTTGTTCTTTC
TCCTCCTTTTCGATCGCCTGGTATCGTGCTTGCGACCGATGATTCGCTTGTTTAACCTCA
TCTTGAGGAATCACTTCGCTCAGATGAAAGGCAAAACGAGCTTGCTGTCGTAGTAGCGTT
CGATTTAGATCTTTGTCCTCGGTACCGCCCTTCACGTTCAGCACGGCTTCAAGGGAGCGG
GTAGGACCTCTCAGTGCTAGATATGGATCCTGCATGTGTGCAATGCCATTCATTCAGTGA
GTAGTAGATAATATGTTACCAATTCATTTCTGATGAGATGGAAGTAGAGCACAGCACATA
TTGCCAGCATAAACAAAGCAACAAGTCAGAGAAGAGGTTCACAAGACGGTTGCCTCACCT
CCTCCGCCCCTGCCGTCGCAGCCGCTCCAGCTTCGCCTCAAGCTCCTTGAGGACCTGCCA
GGTGGCGTCTCCCTCCTCCATCGGCCGGTTAAAAACCAGCGCCTTCCGTTTCACGGGGTC
CCACAGGTTCCCCTGAATCGTCGTCAGGTTGGTCGCCGCGACGTGGTCTAGCACCGCCTC
GAGGCCGGCCACGTCCCTCTCGGCCACCTGCAGCGAGATGTCGGGCCACCGTAGCACGCC
GGGGAACGGCAGGCGTATGTCATCTGCGATGACGACGGGGATGCAGCCCAGGAGGACCGA
CTCCACTAGACGAGGGCTCCATGGCGCCCACCCCAGCGGGCAGATGCAGAACAAGGAGCG
CGCCATCTCCGACCGGTAGCCGTCGTTCCGTTTCCGCTTCAGGTAGAACTTGCGGTTGCG
GCCATACAGCCGCAGAAGTTCAGTCCTCACCTTCCTGAACGTGATGAATCGATTGATAAT
CATACTTGGTGACATGAATTTCGTATTCTACATATGGTGATGCAATTTATGAACTTTGCG
TCCTGGATATTTGACCAGTGGACTGTGCAAGATGAAGCAAAATGACGAGTATTCTTGCCC
ATGAATTTCTTATAAGGCGATGTACTCCTCGCCAAGTGGATGCTTATTACCTGCTGTAGA
AGTGGCCACTGATGTTCTTGGGGTGGACCTCCATCTTGCCCCGGAAGAAGGCAAATATGT
CCCGATGCGCCTTCTCCGGCTCCGGCAGCTCCCGAGGAGCCAGCTCAGGCGGCACGTAGG
GCGGGATCACCACATGCTCCACGTCCTGGCAAGGGTGCCGGCCCTGCACGCCGAATGTCT
GCAGTAGGATCGACCCCTTCAAGAACTCCGGGATACCGGCGGCCATCGCCACATCCTCCT
GATTGATCAACCATTAGGCCGCAAGATCAGGCACAAGAACAATGCACGCAAGAAACAGCT
GAGGATTAGAGGCTGGATCGAGCAGCGGGCGGTCACCATGGGGTGGAAGCAGGCGCCGAA
GTCGTGCGACGCGACGAAGACGTGGTCGGCCCCAGCGGAGAGGTTCCAGAAGGGCATCTG
GGCGCGGACGAGGCCGACGGCGTCGGCGAGCAGCCCGCGCGCGTGCGCCAACGACGGGAG
CCCCGTGGGCGTGGAGAAGTTGCAGCAGGCGTAGACGGGCACGAGGAAGAGGTCGGCCTC
CTCGGGGCGCAGCCCCGCGCGCCGCTGCCGCACCAGCAGCGCCTCGTGCACGGCCACCTC
GGCGGCGGAGAGGGGGGGGGGGGACCGCGCCGCGGCGGGCGC