Map Locations of contig_54013 (5933 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_54013

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67985 1 1087 bp AK250378.1 Available Available None
MLOC_67984 1 772 bp None Available Available None





CDS Structure of MLOC_67985






CDS Structure of MLOC_67984






Contig Sequence (5933 bp)

>contig_54013 5933 assembly3_WGSMorex_rbca.fasta
GTCACCGCCATGGACGTCGTCTACGCGCTCAAGCGCCAGGGCCGCACCCTCTACGGATTC
GGCGGCTAGGCCACCGGACCACCAGCTAGCTTTGTTTGGCGCACCGCGGTAGTAGTGTTC
GTGGCCGGTCCTTGGGTGTAATCGCCGCATCTCGCTGCTGTTTGCCCTGGCCTTGTTTAG
TTTGTCGTCTGGATGTGCTAGGATGGAATGGAAACTGTAGCGGTTTGTTTACCCTTGAAT
TCTTGTGTGATCCGTGTTGCCTGTCGATGTCTGTTCGTGCAAGTGGTCAGATATTAACCG
TGTTCTTCAGTTGTCCATATTCCCCCTTTTGAATTTCTGCCCCCCAAATCCGATTCTGTT
GGCGCCAGTGTTTTGGAGTAGACTGAACCATTTGTGTTGGCTTCAGTGTTTGGTGGATCG
AGGCTGAACAAGAGTTCTTCGCTGCTCCATCCTGGTGTCGAACTTGTGCTGGAATTATTC
TCCTAGCTGGAATGTGTTTGGACTATCTGTGGCGTCAAAGTTGTGCGATGTGTGCCTTTG
TTGGTCTGTTGAACTGCTTGCTGCTTTGCTGAACATGTGCATCTGAAGTACTGTATTTGT
TTTGTTGTGGCTTGTGCGTTATCAAGTTATTAGTATTGCTGGTGATGCCGTGAAATGTTA
TACAGTAGTACATGTGTTGTTCGTGCTGATTGCTGAGAAAAAATATGTTTTATCAAGTTA
TGGTGTTGCCGCTGAGTGATGAAGTAGCTCTTGTTCAAGCTTTTATTGCCAATTTATGAT
ATGCACTACCCGTAATTGCTGTAACCCTGCTGGTGAGTGATGGAATTTATTTAAGTTTGT
TTGCTGACCGATACAGCAAGGGCAGGTATTCCTGCGGGCAAATTTTACCCACGGGCAGCG
GGCTTGCCAGAATTTCCTGCTCGGAACAGGCAAAATTTGGGCTCGCAGGCTCAAGCTCTA
CCCGTGCCCGACTGCCATCAATCTTCGAGCCTTCTTTCTTTCTTCATTTTTTTTAAAATA
TAACATTCAATACTGCATAGCAATTTCAGAATCCTGAAGGCATTAGATCTTTCAAATATT
TTGTGATTTGCTACATGGCAACTGGCAAGTGTCACTGTACAACACACTCCACACACACAC
ACAAACATCCTGAGTTCAGGCACATGCTGCATTTGAAATGGCTCAGGGGAAGCTCAGCTC
TAACGAGCGAACTTGAAGTACAATATGAAGAGGATGGCGAAGACGAGGGTCGCAATGATG
CCGCCGACGATCCACTTGTTCCTGTCCATCCTCTTGGACATGGACGCCAGGATCTTCTTG
CTCTTGCCGATGTAGTCGTCCACGCCATGCAACTGTGTGAGCAAGAGCAGCAGGATTTCA
TTAGTACACACCACACAGCAGGTAATGGAAGATGTGATCTATAGCTGACATGAGGATCAT
TCTCTCAAGTCATAATTAGCAGGGTCCGGTACTAGTTGCTTTTCTTTTACTTGACAAATC
CAGGCAAACTTACCCCCAAAATGATGCCAGAGATAAGCTAAACAGCAGGCACACAGGGTC
ACAGTGTTGTTGTACCCAATGCATAAAAGCTAAAGTTCCACTAGTTTGGGAAATTTTGCC
TCTCAAATCAAAAGGTCAAATATTTGTTTCATTGTAACGAGCAGACACGCATGATATGTT
TCTTCACCAGAATATCAAAGTGATCAAGTGGGATAAATCTCTTTCTTGATAATGAAAACT
GCATATTACCAGTGGGAGAAATGTTCCTTTAACGATTTGGCATCATTAAGTAAATGTCCA
AAGAAGCAGGATGCTTGTGCGGTATCCAGATGTAACTCATCTAGCATCAAACCATGGTCT
AACTCCTGTAAAAAAGTTCGGATAACTGTATGCTTACAGCTATCACGCCTAGTATACACC
TATTTTCGCAGCGAAGGTACCTTTCACTCTTTCACTATTAATACTTCATAAAGAACGTGC
CAGTTTCCATTACGCATATAAGTGAAAATGCATCAGGACCAAAATAGAAACTAACCAATG
GCATTCTTGTCTATGTAGTTTGCTAGCTAAGGTTGTTGCTGCCAATCAATAACTAAGCCA
GAAATGATCAATTCATAAATAATTGGACAAGAGAAGGTAAAAAGAACAAATTAGCTCCAA
CGATGGCTCAAAGTACCGAATAAAAGGAACTTGAAAGATCAAAGCACATACTGTTGTGTG
AGCATGGAGCAGTGATTGTCGTTGATTGTGAAGGTCCTGAAGGATCGACACTCCGATTTC
TTCTGTCTCAAACACTGTTCTTTGGCTTTCTCTAATTCTGTCTGAAGATTGGTTTAACCT
TTCTGATGTCATCATCAATCTTCCTCTCTGATCAGATGACGCCTGAGCCATGATATAATA
ATTGCATAAGTACATCAGAAAGGAATTGGTGACATGGTATAAAAAATGCAAACAAGGACG
AATAAAAGGAAATGTAATAAAACACAGGAATAATACAACAGATGTAGCGGTATCCAGTGA
TAAGTTAACATAATACTAATATATATTTCCTCTTAGTATGTCCACTTAAATACGAACCAA
CTAAATATCTAGAAGATCATATATAGGTTTACTTGAAAATTTATGAAAATGAAGCTTTCC
TGCAACGAAAATCATACATATTCAAGAGCAACAACAACAACATATTCAAGAGCAACAGTA
TCAATTAATAATTAAAGTGATAGATATGATGAAATGAATGTGCTCTGTTATTTTGCTCAT
ACTTTGCACGGCAATACATAATACATCCTAGACTGTTCAACCGGGGACATTAGATTAAAA
AAAGTACAACTGCAATCACTTATTGTCAACAAAGTCCAAATGTGGTCCTGAGTTCAAGCA
CAGCCCGGTTCTGTATTAAGGGCCTGTTCGGCAACTGCCCAGCTCCTGGCTTCTCTGAAT
CAGTGGGCAAAGCTGGGCTGAACGGGTTAGCTCCCAGAAGCTAGCTTCCCGGATCTAAGG
CGGGTTGTAGTGCAAAAACAAGGAGCTGGTGTTTTAGCAACCAGAAATTGCAAAAGGTGG
AGTTCAGGTTATCTACAGAGAGATGCCACCCGAAGTGAAAGAAAACGATTCGTACCAGGG
AAGAATAGAACGGAGCAACTACCTTCGCTCCCTACCAGGCCAAAATCAAGGTTAATGGGC
CAAGCGGCTACCAGCCCAAGACTAGCGATCTGGGATCTGGGAATTCTGTTGCCGAATGGT
GTTCTGACCCATGATTTTCGTCGGGAAGCTGGAAGTGAGATCGACAAGCCAGATTTGAGG
ACTTCTGGGAGCTGGGCAGTTGCCGAACAGGCCCTAACTATTAACATAGCTCTAAACTGC
TTAAAAAAGGCATGTATCTAATACTCCCTCCGTCCGAAAATACCTGTCCTAAAAATGGAT
ATAATGAATGTATTTATAACTAAAATCAGTCTAGATTCATCCATTTCTAGGACAAGTATT
TCCGGATGGAGGGAGTACTAAGTTTCTGACGATAACCAGAGCACCAGACTTAATAACAGT
GGAAAAATTCAAATTACAGATATAACTGAAGTTCATCAAACATTGTTCGACATTATATCT
ACCGACTAAAGCCGTCAAAATCCATAATAGTAGCAGTGCTCACTTCATGGATATCCATGC
CAAACATTTAAAATCAAATAAACGATATCGAACACTTCTTTGGACACCACACTACTACAC
AGCGTTCTACATACCATGTTTTAGAGGTCCACATTGCACTGTAACCCATTCATTTCCCAA
TTCAAAGTCTAATAGTGTCAAGCATTCTGATCTCCAAACCCACAATATTTACCCTTTTGC
TTGAAAATTTTGCCTTTCCAAGCAAAATTTCATCCCACCTTCCCCGCATAGTGGGATAAC
CAAGTTAACCAACTAACCACACAACATAATTGAATATCATACCATAACTAACACTATCGG
AACCACTATCGTTAACACAAAATTCTAGCATCAAACAGGTCAACAACACCATCAAGTATT
CAAATGAATGCGGAAAGTGTGGAATACAAGTACCAATATGGACAATATGGGCTCAACTCA
CAGCAACAAACCTAACTCAGCCACTTGAAAACAATACAGGTACAAAAGGGGCTAAAAGGA
ACATGAAACCACAGGGCACCGCAATATATCAAGCAAACAGGTTTCAAACACATAAGCCAG
GATGGTAATAATACACTGGGGTCACCCAGACACACTATTTGCTGATGGAACACACGGACA
CACCACATCAGCAAAATGCGTTAGAAGTCCATGTGAGTACTTAGAATATCAGATAGCATG
CCAGAGAGGCGATATACATAAAACGTAAGGTATAGGGAGCTCACCGCGAGCGTGTCCGAC
ATGCCAGACTCGAGGAGCTCCTCCCGGGTGGCCTGTTGGGCATTAGGCGCCGAGACCCTC
TTGATCTCACCCTTGACGTTGTTGAGATCAGACTTGTACTCCCGCAGTTTAGCCAGCAGC
CCGGCCTTGACGCTCGGCTGCAGGCTCCGCGCCTCCAAATCCATCCTCCTGATCTACGGG
AGGCTCAGCCAAACGGAAATTGCAGGCACGATTAGATAACTACACGCACCATAAATCCAC
CCTCCTTACCTACGGGAAGCACAGCTAGAACTGACAACTGAGCACGGAAGGAAGACTAAC
AAAGCGAAAAATTGCACGGAGCTCAGTCGGTTTTTACCAGCGATTCAGACTCCTGCACGT
CGGCCTGGATCTCGGAGAGCTTCTGCTTCTTCTTCTCTGGCGAAGGGAAGAAGCAGGGAA
GAGGGTCAGACCAAGGCGCGGAAGCAACCGGAAACCTGGGGTTCTGGGCGAGAGAGAGAG
AGAGAGAGGCGTGCGTACCGCCGTCGAGGGCGGAGGCGGCGGCGCACTTGCGGGAGAGGG
CGGCGGAGATCTCGCAGTACTGCCGCTCGTAGCCCTCGAAGACATCGCTCATGGTCGCTC
CCCGGCGAATCGGACCAGCGGTCGCGCGAGACAGCCGGACCGGATCGAGGCCCGCGGAGC
CTCCGGCGGAATCGAGGGGAGGGGAGGCGAGAGCGAGTTGGTTGGCGAGGGGGAGGAGAC
GGCGGGTCAGTTGGGGTGCCGTGTCGGGAACCAACCGGTGCACGGAACGCTGACGAGTGA
TGGATGTGTGTACTCGTGTCCCATGAGGCTGCTGGGTGGGCCCGCCAAATTTGCACCAGG
AGTCGAATGATCGTTCTTCCCCCTCGCTACCATAAAAAATGGATTACACGTCAAGAAAAA
GAAATTACGCGCACACCACCACCCCCACCGTCACTCTCATCCCTTTTCTTTTTTCCTTTT
TAAAGGGAGTGTCCATGAGACGAACCTTTTCTTTTTTCCTTGTTTAACATCGAATCACCG
TGATATCAAAGGGGGAAAGACTAGAGTAAAAGCTGGCCAAGTGATAGAAAAATAGAAAAA
TAAAGTTGAAGCCGTTGGATCCTTAATGGATGCTTCAGATCTGAAATGTCAGACTGGTTG
ATTCTCTGTACCTTCAGATCCTTTTAATAGCATCAAACAAATTATATTAAGAACGCAGTA
ACATCCAGCAAGGGTCATCCCTTTGATGACTTCGAATGATCGCTACCGATGAATGCGTTT
CATTCAGGAGCTGGTTTTGTACCAAGCGCCAACTATCACCGTTTCTGCAAGTCCCAAGTG
GTCTAGGATGTTTTTTTTTGTTTGGGAAAAAGTCTATTCTAAACCCTGAACTGGTAGCGC
TCCGACGAAATGGACCCTGATGTCCAAATCTCTGTCGATTGTACCCTAAACTTCTTAATC
TTGGTTTAAATCGAACCTTGCAGTGGTTTGAGGCTAACAAGCGCTGATGTGGCGAAAGTC
AACCGGTATTCTGACTTGTGGGGCCGTTGCGCTGACCGTTGTCGTCTTTTAAC