| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_53987
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_67965 |
4 |
3902 bp |
None |
Available |
Available |
LOC_Os03g03660.4, FRAME:+3, EVALUE:8e-112, 13103.m00358 protein CAMK_CAMK_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
CDS Structure of MLOC_67965
Contig Sequence (8054 bp)
>contig_53987 8054 assembly3_WGSMorex_rbca.fasta
CTCCTGCCCCTCTGCCGCCATGGAGGCCATGGACTAGAGAGGGAAGTCTCCTCCCATCTA
GGGGGAGGACATGGAAGAAGAATAAGGAGGGGGCTCTCTCCCCCTCTCTCCCATGGCACC
GAAGTGCCACTCGGGCAAGGAGCATGATGGTGATATACATCAACAATCTTATCGCCGTCA
ACACCAATTTCCTCCCCCTCTGTGCAGCGGTGTAACACCTCTTTTCCCGCTATAACTCTC
TACTTAAANNNNGTGCTCAACACTACATACTATTTTCTAATGATATGTGACTATCCTATG
ATGTTTGAGTAGATATGTTTTGTCCTACGGGTTAATTGTGATATGATATTATTGATATAA
GTTGTGTGTTGATATGATACTGTCCTAAGGTGTCTTCCATGAGGCGTACGTGTGAAGGAT
ACATGCCGCCGCACTTACGTGTGGGACGCGACTGTAAGCACGACGTGATGGACGCGTACA
TGCCGCCGCATATCCACCCTGCATTTGGACTGGATATGAGGAGCATCGGTCAACCGTGCA
TTTAAGCCGGTTCGTGGCGTTTGGATTGATCAGTTTTTTCTGACCGATCATTAACCGGGC
CGCTCGCCCCGCTCGCCCGATCATTTGAGGAAGGTTTCATGGGACGTTCTTATTAAGGGA
TATGATCATGTGATTAATCTTTCGATTCTAGGAACAAGGCGTAAAAGCATCTAGAGCCGG
ACTTAACAAATATGACCCCTTAAATGTTCGCGGACGCGTCCGGGCACTTCAGTGACCGGG
TGTCCATTTTCAGCCCTTATTTTTCCTTTGCATAGCCGCACTTCTCATATTTTTTTTCTA
TGTTCGATCACTTGCACTTGATTGATGGAAAAAATAGAGATAAATAAAATAATGAATAAA
AAAAGAAAAAAAGTGATCCGGGATGGGGTCGCGTCCTACATAACAGACTGACCAGGTGTG
TCTGAACGCGTCCGCGAGTCCTCATATCGTCCTTAGATTTGTGAAGGATATGACAGACGA
GAGTCGGTCCAAACGTCTAGAAATAAAGTGTGATGTCCGATTAGATCAATATTTTTTATC
CGAACATTGATTGGGAGGACATTTCACACGTTTAAAGAGGATAAGGGGTCCAGTTATAGA
TATTGCAACTTTCTTTTACTTTAGCACGAACCTAACATTTCTTTTTCCTAGAAAAAAGAG
CCTTACCTTTCTAAGGCACCGCATGTACATCGTCCATTTGTATATCTCCATATCCGAACA
AGTGCACACCTGCATACATCAACATCACGCACTATGCAGCCGCACCTTACAATAGACCAA
TCCATTACTCCAGAAGCTAATTCGTGGGTACCGTTCGGTACCCACCTAATTCCCCTATCG
TTTTTGTGTAATGGTGAGTTCCGAATAAAAATAAAAATAAAAGTGTGTGTTAGTTCTTCG
ATCTTGGCGTTGTATTTCGCCATGCGGCTTTTGTGGCTGTAGTGGCGGTGGTGGGCGGCG
GCTGCGACCGGGGATGGTGCGTGTCTAGTTGCGGTGGATCATCGGATCCCGTGGTCCAAG
TGAGGTCGGCCTTGACATGTGGTGGTTGATGGACGACGATCGGTGGCTGCAGGTTGTCAT
CTTCGGGAGAAATCCTTGATCCGGTCTTCTTCGAAGCATGTGACCGCAGCTCCTTCAGGT
GTCGTGATTTTTTTTGTAAGTGTCATCGTGAAGGTGTGCACCTCCTTCTCCCCATGGATT
TGGCTTCGAAGGAAAACCTTAGATCGGCTGCATCAGGCGTGGAAGACGTCTTCGCGTCTT
TCTTATCTTTGGGGCATCATCTTGGAACCGGTTATGGCTGGAAGACCAGTGGATGGCGGC
ATCTTTGTTGCGTGGTTTGATGAAGTGGGGTGTTGGTTTTTTGTTTGACAACGATGATCA
CGTCGAGAGGAGCTTGGGTCGTGGCATGGGCTTCGGTAGTCGGTTCTTCCCGACGTGTCC
GAGATGCTCTTCCGTGGTTGCTTGATTGTTTTGAAGTCGGAGTTGCATTCGAGAGTCCAG
GTGATGACTATGACATGCACTTGATGGTCATTTGCAGAGGGCATGTTCAATGCAAGCCTT
GCATCTTTTCCTTACGATGTTCGCCGCTAAAGTTAGAGCTATCAGTTGCTTACGTGTGTG
GTCATTCTTTGTCATGTGTCGCCGTGGTTTCTATTGCTGTTTGCAGGTTGGCTTCGACAA
TGGAGCTCTATAATGAAGCCGAAGTCGTCCGTTTGAGACAACCGGTGATGACTTGTGACT
CCTCGGCGGATGTTTTTTTCTTTGCAATTCTGTGTTTCTTATCGGAGGCCAGGTTGACCT
GTGGTGTTCATATGAAGAGTTGAGTTGTATCACTTTTAGCCTGATATTTTATCAGTTAAT
CCAATAATTTTCTTAATGCAAATGACTGCTCTTTTGCGTCGTTTCAAAACAAAAAAAATT
GTGCAATAGTGATGTATGGTTATTTCCAGAAACGACCCCCAACAAATGCGGTGCGCCGTG
CGTTCTGTCACGTCACGTCCTATCGAGTCGATCTCGCGGTCGCTGTGTTGTGGGTTCAGA
TCGGCCTGTCACCGCGGGCGCTAGTCCGCGGCCTTTCGGGTCCAGCAGGCCGTCGGTCGC
GATCGACGGATGGCTTGTGGAAAGCCGGCAGCGGAGCGACCCTTTAGTCCGACCCGATCG
TGCTCCGACGGCGACGGCGGCCTAACCATATGCCTACTCCTGCTCTCACATTACCGTGTT
GGACGCTGCACGTAGGTCACGGTGAACATAGGCCTAACCATCCTTCACGGAAAGCCAATG
GCGCAGCGCATTGCGACGGCTGTACACCACCAGACCAGCCCATGTGGCCGCCGTGTGCGT
GGCTCCGCCGCTCTGTCCCCCTCCGCTCGAGTCCGGCCGGCGCATGTGGCCGTCGCGACT
CGCGAGGGCTTCAGGCAGTACAGTACGTGTCCAGCAAGCTGAAAACGCACCTCGCCTCGT
GTGCGTCCCAAGGGCGACCGGCAATAGGTTGACTTGGAACACGCGACATCACACACGTGT
CGTACATTCGTGCTTTTTTATTTTATTTTATTTAACACAGTATAGACCCAATGACTCATA
TACACACGCATATATTCACCTCTAGGAACGCATACATGTACATTCTATTTTTATGAGCAT
CTTCGAAAGATTGAGCCGGCATATCATAATTTACGAAATGAAGGTAGACACTTCATCGTC
AATGAAAAGGTTTATCTCACTGAATGCGCATCATCCAAGATCCTGAATAAATACAAAAAT
AAATGTGAACAAGTCCCTCTAGCCATCTAAGCACAGATTAATTCGCTCGTACATTCGTGC
TAATCCCATCCATTTCCATGGTTTTTCTCAATATTACAAAATTGGATCAAACTTATTGAT
AGAATAGTTCTGCATCTCCAATACCAAACACATGCACACACATACATCCAAGGAAATAGC
TTCGTATTTGTAAATGTTGTAGATATCGAGAGTTTTCTTTATATAAAGTTATTTGTCAAA
GTTTAAAAAGTTGCTCCAGGTTAGGATTTCCTTTTCCCGCTCCCGATTGTGACGGCTAGA
GCACTCATCCCTTCCAAACTTCATTGACGAGTCCGTGGATCCACCTCTCCTCTGTGTGCC
GGTTCCAGTGTAGTTTGAGTTATTTTTTTGTAACACGATGCTTGGACGAGTGACGACACT
TCATCTTCAGACGAGTCTTCTGGACTCCGATTCCTATCGAGTCGTTCATCGGGATGGAGT
CGACGGAGCTTCGGCATAGATCCACCTCTAAACAGAGTTGGCGCATAAATGATATATTAT
TTATTTTGCGAAAAAACTTTTGATATATTCATTTTTAATGATGACAGTACAATGAACATC
ATAAATAATAAAAATTACATCCAGATTCATAGGCCATTGTCAACGCCCCTTCCTTGCGGA
AGCCGACAAAACTTCTTGTAGTAGATAGTCTATAAGTCTTCGTGTTAAGGCCTTATAGAA
ACAACGCACCAGAATAACAACCGCCATCCATGAAGAGCAGCGTATACCAGAAGGATCCAC
CTAAAAACACACAAACAATGACGAACATCAACCAGGTCCGAACAAATCCACCAGGACAGA
TATGTTGGAGACATACCGTTACACGTCCACCGACGATGCTAGACGCACCACTGAAACGGG
GCTAGGCAGAAAAAACTTCATTTCATCTTTAGAAAGACACTGACGTCTCACCTTTTTATT
AGGACACAAATCCTAACTATACTCCAAAAAACATGTAAAAACACAGCCCTCCTACGAGCA
AAGGCTAGGATCCACCGGGACCCATGGTTCTGGCCACCGAAGACAAGGCAGATCGCCGGA
GCTATGCGGCGGAAGGTAAAGGAACCATAGCATTTTAGAGGAGACTTTGTATGGCTCTGT
AGCAGCCGTTTTGCTTTCTTGAACTAAATATTGTTAAATAGAGTAGTTTTATTCAAAGCA
GTGGTCATTATAATTTACAGGCGAGAAGTGCCTAAAAATACTTGTTGTACTTGTCAACCA
CGGTAAGACAACTCTCTAAACAAAAGAAAAAATCATGGAATAAATCTTTTCCATGTGTGA
AAAAAGTCATGGAATAATCCGTGCTCTGATATTCTGGCTTATCCAAACAAATCATCTCAT
ATTCTTGTTTGACACCTGTAATCCAATTCCAAAAGCCATACACACATCTAATTCCCGCAT
AGTGGAATGGTTCCCTCCAAAACGGGGAAGGAGAAGTTTGAGACAAAGCATACAACTACC
AGTATTCCAAGGCAAGCACTAATCCATCGGGTACTACAATCTGCTAGGAATGCTTCTAAC
CCCGAGCTCAAATGCACCTACTGTAACAGTAAAATTGAAAAATAAAATAAAAATAAAAAC
TTCCGGGCTTTTTCTGCAACAAACTTTAAGAAATGTTTGAAGTTCATGCAAAGTTTCATC
ACGAAATCAAATTAGAGTAAGTAATGGGAAAAAAATAAAAACAAAAATCCAAAATGCGTT
TGAAAGTAACATTTTCGGAGCATTGATTTTCTTTAACACGCCTTGCACCAGTGTGATTCC
GTGGTGAATTTTGGCATGCACTCCAGACATTCTCTAAAATTTGTTCTATTTTTTATTTAT
ATTTTTAAATTTACTGTTCATCCAGTTGCATTTGAGCTCGAGATTAGAAACTCCACGTAC
AATCCACCACCGTAGTTTCCCCGGTTTCCAAACGGGAAGACACGGAATAACCTTCCCTCC
GATATATTCTGGCTTATCCAAACAAATCATCTGATATTCTCGCCAGACACCTGTAATCCA
ATTCCAAAAGCCATAAACACTCATGGTTCCAGCACGGTAGAAATGTTGCGTCCAAAAATG
GGGAAACAGAGGCTTGAGCCAAAGCAGACAACTGGTAGCAGCTCCAACACAACACTCCAA
ACCAAGCACAGCTCAACTCTGACCTTTCCGTGCAAACATAAAACAAAGCGCTCTCGGCGG
AGGAGCAGCGAGACACGCTAACTTTTGGTAAAGAAAGAAGCCAGACCGAACAAAAACACC
CGTATATATATACACCCTTCGTCTAAAATAAATGTCTTAAGCTTAGTATAACTTTATACT
AAAGCTAGTATAAGGTTAAGATAGTTATTTTAGGACAGAAAAAGTATATTCTAGAAAGAG
CAGAAATCCAAGGAGGAGAAGATCACCGTTCGTGACACGTGACGCGACGGAGCCCGCCGT
CTCATGCCGCCAAAGGCCAAACACTTTTTAGCACCCCCGGTTTCTGCCTTTCTTTTTTCC
TTCTTGCTTGGCAAAGCCCCTGGTTTATGCTGGCGTAAAAAAAAGTCCTGGACCGTGACC
GCGGAATTCCAAAAAGGAAAATCAAAAATTGACCACGAAATCCAGAGAGAAAAAAAAACG
ACTTGCGAAATTCCAGAAAGGAAAAAAATACATACATTTTGACTGCGAAATTCCGCGGAG
GGTCGCACCTACCCCCGTCCACTGCGGGGGCTATAAATCGCGGCCCTCCCCCGCCGGCCT
TCCTCTTCTCTCCTCTCTGCATATTTTTTTTCCTCCCATCCGTTTTGCGCATTGGCCCCT
CGGGAACACGGGAATCCGTGCCAGGCCCCCTCGTCCGATCCTCCGCAGTGCAGTCCAGCT
CGCCGCCGCCCGTCTCGTCCCCGTGCGCGCCCCGGCCCCGGTTTAGCGTGCGTCCGGCGG
GGATTTCGTGCTCCGCGGGCCAGATTCGCCGTCGTGCGGCCAGCCGTCCCTCGTCGGTAT
CCGCCGATCCGTGGCCCGGTCCAGCGGTTTGCGTCCGCGGGGTTTGGGCCGGTGCCAGGT
GTGCGGCATTGGAGGCCCTCGGCGTGGGGATCTCCTGCCGGAGGGAGCTTTGCGGGGGGC
AAAAAGCTGCCTTCGGGAGGAGCTCTTCCGGCTCCGAGGGTTTGGTTTGGTGTGCCGGGG
GCGGCGGAGGCCTCGTGTTTCCCGTGTGGGGTTTGGTTGGATTTCGTGTAGTGCGGGAGC
AGAGAAGCTTGGCCTATTTAGCGCGCCAGGCCCCGTGGTGGAAGGCCTCGCACCACCGGA
GATCTCCTCGCCGAGAGGAGAGACGCCTTCCCAAGGGAATTCCTGCCGGCCCCCAAGGTT
TCTGCCTCCTCCTCCCTTGGTTGATTCGAGGCCTGCTCTGGTTTTCATGCCGTCCTGGGT
TGCTGACCAAGTTTCTTGTTGTGTAATGTCAGGTTCTGGATTTCCTCCTCGGCGAGAAAT
CCTTGCAGTTCTCCAGGTTTGCAACTAGTGTTCTTTTGCTATTTAAGGACTCGGCAATTG
TGTGTGTGTGAGAGAGAGAGAGACTGGGAACTTTCAGCCTGCAGAGGGTGGTGTTGTTGG
GATGGGTAATCAGAATGGGACCCCCGGGAACGACTACTACGGCCGGTTCCCCAGGGAGCA
TCCTGCTTCCAGGTATGCCGATGGGATTGAAGAGGATAGCTACTCGGACTTGAAGAAGTC
TGACAAGCCCTGGCCCGATGCTGACTCGTTCAAGCCCACCGCCGCTGGTATTCTCAGGCA
AGGGTTGGATCCGACATCCATCTCTGTACTCGGGCGCAAGACGGCGGACCTCAGGGAGCA
CTATATCCTTGGCCGGAAGCTTGGCCAGGGCCAGTTTGGGACGACGTACCTCTGCACCGA
GATAAGTACAGGGTGCGACTTTGCTTGCAAGACCATCCTCAAGCGCAAGCTCATCACCAG
AGTGGATGTCGAGGATGTGCGCCGTGAGATCCAGATAATGCACCATTTGTCGGGGCACAA
GAACGTTGTCTCCATCAAGGATGTCTATGAAGACGTGCAGGCGGTCCACATTGTGATGGA
GCTCTTGCCTGGCGGGGAGCTCTTTGACCGGATTCAGGGGAACGGGCGTTACAGTGAGAT
GAAGGCTGCAGAGATTACAAGAATTGTTGTTAGCATTGTGGCCATGTGCCATTCACTTGG
TGTGATGCACCGCGATCTCAAGCCGGAAAATTTCCTCCTCCTTGACAAAGATGATGACCT
GTCCATAAAAGCAATTGATTTTGGCCTATCCGTCTACTTCAAGCCAGGTATGGTACTGAA
TTTCGATGCATGTATAGGGATATATTTTTAAGCAACAAATAAATACCATACTGTTTTTGT
GCCTATTTTGCTGTATAATATTTTGTTGACACTGAAATGTGGTCACATTTAGTTACATCC
TGCTGTACCCGTAACGATCATCATATGAGCCATCACTTCAACATTCAAACTAGTACGGAG
TATATAACAATATAACATCATGACATGAATGTTGACTAACACATCAGGAGTTGGTATATC
TTGTCGATTCAACAACACACATGAATATTAGCTTATCATTGCTGCTTATTACGAGGATGA
TGCAAATTGAATATGTAATTCTGTTTCTACCTCATTCATATTCACATGTATCTGCATTAT
ATGTACCCAACCCGTGTGTGAAGTGTTTGTTGTTATTTTCTGAATAAGTTATTGTTTTTC
TTTATTAACTTTGC
