Contig Data
morexGenes
Links



Map Locations of contig_53958 (4885 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_53958

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67954 3 1893 bp MLOC_67954.1 Available Available LOC_Os07g44780.1, FRAME:+2, EVALUE:2e-133, 13107.m04714 protein GDSL-like lipase/acylhydrolase, putative, expressed





CDS Structure of MLOC_67954






Contig Sequence (4885 bp)

>contig_53958 4885 assembly3_WGSMorex_rbca.fasta
AGAATTCGCGAAGGATAAAACACTAGAGCAAAAACTCTAGAAAGACTTATATTTTGGAAG
CTCTAGTGGCTAGTGGCTTGATTGAGAGTAGTTTAACAGTACATGTGTACATAGAAAAAA
GTTGTCACAATAGTGCAACGCTCCAGCAGTCTACTGTTGATTATACTGTAGCACTAATAG
CATTACCATATACTATTAGTAGAGTAGGAGACATACTATAGCATATTGTTTATATATTGC
AGTGTAGCAGGTGAAGAGTAATATTTATACTACTTCTCGCTGCTCTTTATATAACCTGTT
GTGCATCAGTGCATGCAAAAGGAAGCTTGAGTGCTTGACGAGGGAACGCGCATCTCGATC
GTCAGATAAAGCTCGCGCGAAGCGTGCCGTCGTACGGAAAGGGAAGCGTGCCGCTGCACG
GGAAGGATTGTGTGCACACATTGCAAGAAAGTTTTGGTTGACTTATCTACAATACGACCA
TGACGTCGTGTTTGGTTTGTTCGACACGTAAACACCCGGTATACTCTCATAAGCACACGT
CAAGACTCAATTTTGTCTACAAGTTTGCATAAGTCAACTGCGCCATGGATCGATCAAATT
CCTCGGAACGGATTAAAAAATCTCGTTGCACCGTACCATTGTCACGAGTTCCATTTTGCG
TCATCGACGACGCACGTGCACACGTCGCCTAGCTTATCCGGCCGGCCGGCCCAATTTAGA
AATGTTAGAGGCACGAGATAGCCAGTCAGCCAAGATTTGCCTCATCATAAAAGCTAGTAA
CACATGTAGCTGCTAGCTGGGCGTATCACATGTGAGGTCGAAACCATTGCTTTCCATCCA
TCAGCCATGATTTCGGGGGTGTCATCTCCTCGGAAGCTCTTGCTACTGGCGGCCGCTCTT
CTTACGCTGTCTGTGGCCATGGCGGCGTCGCCTGCGGCTGCGCCGGCGAACCAGAGCAGC
TGCTACAAGCGTCTATTCAGCTTCGGTGACTCTCTGATCGACACCGGGAACTACATCGTC
CACTTCTCCACCACGCCGGGTCCGGTCATGGAGTTGCCATACGGCGAGACTTTTTTCGGC
CGCCCCACCGGCCGCTGGTCCGACGGCCGCCTCATCGTCGACTTCATCGGTAACTTCTTC
TTCGGCGACCATGATGATGTACACCAGGCGTGCTTTAAGTACTGCCCACATCTTAGTACC
ACGGTGTCTGTGCAGTGGAGAGGCTGGGTTTCCCTTACTGGCCGGCGTACCTGCAAGCGG
CGGCGGCGGCCGGTAACTCGCTGGCGGAGGAGTTCCGGTACGGTGTAAATTTCGCGGTGG
CATCCGCCACGGCGCTTAGCCGGGATTTCTTCAGGAAGAAGCACCTCCAAGTTGACCAGA
TGCCCCCCTACTCCCTCGACGTCCAGATTGGGTTGTTCAAGAAAGTTCTCGCCGTGCTTG
GCTCCACGGACCAAGGTGATGGCCCTGTTTGGATACTCTAACCCAGTTAAAGGTTAGAGT
TAGATTCTAACTCTAGACTAATCTTAAATTAACTTTAATAAAAAAGATATCTGGATGGAA
GGGTTAGATTGTCAATAAATGCATTTTTTCCAATTATTTGGCTCCTTTATTCAGGATTTT
GTGTGATGGAGGTAGAGGCTAGAGGGAAAAGTAATTTTTTCTGAACAACACCTAACTCTA
ACCCAAATAAGCACCTCTTGGTTGGGTTAGTTCTTTTAAATGGGTTAGATGCATCTAATC
AACTCTAACCCTCCTGTTTGAATGTTTTAGTGTTAATTTAGTCCAATCTAACCAACTCTA
ACTCTAACCCATTGATCCAAATAGGACCGATGTGTCGAAAAAAAAAATGCATGCATGGCG
CCATGGCTACGCAACGCACTGACCACACATATTATATATGTCTGTCACATGAACACGTCC
ATGCATGCAGAGAGGAAGGCGGTAATGGCGAGCTCGCTGTTCCTGGTGGGGGAGATCGGC
GCCAACGACTACATCCAGCCCTTGTTCCAGAACAAGACACTCGAATGGGTCAGGCCCCTC
GTGCCCCGGGTCATCAGCTCCATCGCTCTGTCCATCGAGGCTCTAATCAAGCTGGGCGCC
AAGACCATGTATGTGCCAGGCGTGTTCCCCATGGGGTGCACCCCGCTGTTCCTCGGCACC
TTTTCCGGCGACGGCCGCGACCCTGTCACGGGCTGCCTGCGGTCTCACAACGACCTCACC
CTCGTTCACAACCACATGCTGAAATCGAAGCTCGACGAGCTCCGCCGCGACCACCCTGGC
GTTTCCATCATTTACGTCGACTACTATGACGAGGTGCTCAGCCTCATCACCAAGCCGCTG
GAGAATGGGTTTGCAATGGAGACGTTGCTGGACGCGTGTTACCCCGTCTTCGTTCCTCGA
AGGGAGGCGGTGCGGTGCCCGGACCCGTTGAGGTACGTGTGGTGGGACGGTGTGCACTTG
ACGGAGGCGGCGTACAAGATCATGGCACGCGGGATACTTGACGGCCCGTTTGCTGTGCCG
TCCATCATGTCCACATGCAACCGCAACTTCTAGACTTGCGTGACTACAAGAGATGCTAGC
TAAGAACCCGTGCGTTGCAACAGGAGAAAAAAAATCACCATCTTCAATGACGATGACCAC
ATTATATTCATATTTCATCGCATGATTTCAAAAATTTGTTCACAAATGCAAGAAAATATT
CTTTTTTTTAATTTATCCAGAAAGATTGTGCTGAAGCTGTAGTGCCAGAGCTGCAAGCAC
TGCTCCCAACGCAGCATCAAGAGGTCTCTTCCTTTTCTCTTGAACTAAGCATTTATTTTT
CTTTTGTGTGGCTCTCTCAACATTTTGTCCTGAACTATGTTGCAAGCATTTTGGGGTCGG
TGGAGGCAAGAATAGCAAGGGAACTACTCCCTCTTTTCTGAATTGTTTTCATTTGTATGT
TGTCGTTGTGGTCAAGAACTATCTCCTGCTATGAATTAAATCATATAGAAAGTAGTAAAT
ACAGTAAATTTCATGGAAAATACGACCTAAAAATATCATGCTTTCAGCGAACATTGTTCA
TGAATTCTCATATACTACAAAGAGGAATAAATTATCACCAGCAAAGATAACCTACCATCA
AAAGAACACATACGAAGAGAGACAACATAATAGCATAATTATATATTGTATTTGCAGCAA
TATAAATGCCATTATCACTTCACATCTTACATCAGTAGAAATCCCAGCTACTCCCTCCGT
ACCTAAATATATTTCACTAGATGTCTACATACGGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTCTATATACATCCGTATGTAGTGCATTAGTTGAATCTCTAGAAAGACTTATAT
TTAGGAACGGAGGGAGTACAATCTAACAAAACTGGAACAAAGTCACGATCAGTCCAGTTT
TCAACCCAAGACATCAACAAATACATGGCTATCAAGAAGTAGACGGACCGCGCGGAGCCC
ATGAGGGCGGAGAGCCGGACGGGAACGGCCATGGATCTGGAGGTGAGCTAGGATAGGATT
TGGGGAATTAGAAAGATGTGATCTTTTTGGTTTTGGGGGGAAAACGGTGTGAGACGAGGG
TGGCAGCGGGGCGGTGATTCGCGGTTGGAAACGGCGTGACGGGCGATGGCTTGCTCTGTC
TGTTGATTCGCGGTGCTTAGATTCGCGGTTTGCCGATGGCTTGCGAGCATTTGTTGGCCG
GACGGAGGATGGCAGCCGACTCCGACACGAAGGTGGCCAAATATGCCGGTACTTGCGTGC
GTGGCCCGTACAACACGGCCAGTTTTTTATATTACGTAAACAGCCCAAATAGATCCATCA
GGTGAGCTAGTGGACTAAACGTATGGGTGGGCCGACCCGTTTTCTTGTTGTGTCGAGAAA
GATAGCAACTAGTTAGCGAGCACCCCCTTATAAATATTTTAACGATCACTTTCACACGTC
GTCACTTTCCGTGTTCCTATTAACCGCCACGTGTCGCGTTCATAGCATGATCAAGAAACT
GTCACCCAATTGTCTTAAGACCTAATTTAAACAGTAGCAGCTGTTACCACTCCCGGTCGA
GGTGAAGATATACACTGAACAAGTCCCTTAAAGAATTATGCTCCATAATAACAAAAAAAT
AATATTCAACACGTAATATAAATGTTTTCTTACCAAAATTTTCTTATCAAAAGTGTTTCA
CTCTTCACAACAACTTCAGAAAAAAGTCTTGATGATCTATAAGTATATGAGATTAATCAT
AGTCTTTTCGTTAAGTAAGATTGTTAAATCCAATAAAAAACATAATGCATTGATAAACGG
TTTTAGGTCCGGTGCTCTTGCCGGGCTTTGAACGACGTGGTTAGTGGCGAGGCGGTGGCT
ACTTTGACACTGGGTTGGTGGCGTCAGACCCGTGCGACGGCGGTTGCTCGTGGCGCGGGG
CAGGGCGGCATGGTGGGTGGTCACGCAATACAAAATATAAAATAAAATAAAAATGATTAC
AAAAATGAACAATGAGATTTAAATTATTATTGTAAGAACTAGCATGGTTAGACAAGTAAT
TGTGCAATTGACATCATGATTTTTTTCCCTATAAACACCTCTTTATGTACTTGTAAATAA
TAATTTCCAGTTAAAAACATTGTAGTTGTATACACCACTTAGAAACAAAGCCTTTAGCTA
CTATTGTCGCGCAGATTTAAATTCGAAAGATGTGGGACCGAACTCTTCTAGTTTTTAACT
TACCATGCCAACTCTGATCTAATTAACAAGATATGTTGAAACTTACCAACTACGTACCAA
GCTAGTAAAGACATTAACTGGAGCTACTAGCTCTTAAACAGTTCTGATGTGGCGCGCGGC
TATATCACTAGTGGGGACGGGGCCT