| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_53932
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_67941 |
1 |
990 bp |
None |
Available |
Available |
LOC_Os01g65440.1, FRAME:+1, EVALUE:1e-29, 13101.m07069 protein universal stress protein domain containing protein, putative, expressed |
CDS Structure of MLOC_67941
Contig Sequence (6786 bp)
>contig_53932 6786 assembly3_WGSMorex_rbca.fasta
GCGCGCCGGCGCAGATCAGTCCCCAATATGTTTTGTCCGTTTTTATTTCAGTGATATTAT
TGAGAGAACGCAACCTATACACATAAAGGGGAAAACCATCGGGCACAAGCTCAACCCTCC
TGACTGTGGTCCAGGATGTAAGCCTCAGATCAAACCTATGATAGGTTGTTCTATATGGCT
TAGTCACACGGGAAATCTCAAGATACTTCAGATAGCATACATTCCCCTCTGCAATAAGCT
TCTGGAACTTGGCAATGAGGCCCTTTGGGGCAATAACATGGATACCATCACCCTGCAACA
CGAAAACACCCTCTCATAATTCATAAATCACCATAGAAAAAGCTCATCCAAAAAGTAAAC
ATGTATGAAAAACCCATGTGGTGGATCCGAAGTAAAAAAGCTTTACTTGTGAGTGAGAAA
TCTTAATAACAAAAACAACGCATGAACCACAAAAATAGATGACACCAGACCTTCTCATAT
CCTAATACCATGTGCAAACGTAAAAGCTCAGCATCATTACCATCATCACGGTGCTCCCAA
AGACGGCAAACCCTCACATGGATTCGCGATTCATGATAGTTCCATCATTCACGTCCCGCA
AAAGCGAGTACTCCATCAAACCAACACTTCCAATGGTCATATAATGAATCTTCATATGGA
CAAGAAAAAACATGATCAGAACATAACTATTGTGAGGCAACCAAATCAATTTTAAAACCG
TTGGGATAACAACAACCAACCGTCAAGATGCCTTACTTCTACATTTTTGAAGGAAGATAT
ACAATACACTATTTTGTTTGGACCAATTGTCCAAAAAAAAATACATAACCAATTTTTTTT
GCTCTGTCTTCATACATATAATACTTATGAAGGAATATAAATGTTGCACTGAATAGGAAA
GAATTCAATATTCCCTTGTATGTATGTAGAAAGGAAATGCATAATACAAAACAACATTTT
ATTGACTCTTTAAAATCTTTAATAGGGCATCCCACCAAACGTTGTCGAATTTCAATCTCT
ATATTGCGTTGCTGCAATTAGAAAATAGCGACAGGTTAAATCAACATAAACTTTCTAATG
AATCAAGATGACGTGCCATGAACTCTAAACAAATTATTCAGAAAAAGGATAGAAATGTTG
TGGGAGGGAGCTTTCAGATGACACACTTCAAATTGGTAAATATGTCATCTTTAGATGCCA
GCATGTGATATATCAGTGCCAAAGTATTTAAGGCCATTTCCAATATACTTATTAAGGGTT
TGTAAAAAAGAGAGGCTAAAAAATACTATATAACTTATCATTAATTCATTACATTAGCTT
TATATATAGATATCATGCACTTTATATTTGACATGAATGAAAAGGAAAAAGAAAAATGCA
AGACCTACCTTTTTTAGCAGATTGTTAAAAAGATTTCAAAAAACTAGACATGGTGTCTCT
CAAATGACTATTATAAATGGCAAAGGGACAAAGTTTATGATCATTTTCAAACTCATACTA
TGCTGCATGGTAGTATTCCATGTCATGGTTAGATCTTCATTTAGCTAAGTGAAATCCGTG
TGTTAGTTTGTTGCTGGCAAATTGCTCCGTTCTCTGTTTCTGGGGTAAAGGGACCCACAG
CAGGTGTAATGCGTCCCACGCAGTTTCTTAATAGTAGGTAATATATAAAAAAATGAAAAA
GGAGAAAAACAATCCTTAATCGCTTTTATAAAAGAATCTCAAGTTTTTCTTTTTTGTATT
TTCCCTGGATTACTATTCATGCGGATGCAGTTCCAGTTTACATTTAGTGTACTCCTCATA
CGAAGTAGTGTTGTGATATTTTTCGGGGTGATATGGGTATATTCCAGTTTATTCGATGGG
CATGTGACTACTGGTCATATAAATCACTGTTACGTACAAAGTTATTGTTCCAAAAATAAT
GTTTCATTTGTCCAGTTAACTATTCCGGTTTATTCGGAGTCCAAAAATCGGATTTCACTC
AAACAGTTAAGAGGGAAATAAAATCGTGGACAGTAGTCTATAAGAACGAACCAAAGGAAA
AATAAAATAAGCAACACTTTTTTAAAACAATTAAAAAACTGGCACCAAAGATGTTGTATT
TTTCCTTAGATTTTGGCTTCGCGCTAAAATTTAAGTGAAAGGACAATCACTAATAGCAAT
GCTAATAGTAAATTTAGTTATCATATAATATGAAAATAGATCAGATCAAACTATATTTAT
ATTTATTAGACCCGTTTCTTTTGCCTATGTGGTATTTTTTGAGTAATCCCATAGATATGT
GCGTATTTCACTTTAAGTAATTATCTATAAGTAGGTCCAAAAAAATCATGATATAATGTG
TTAGAGGCAACAACGTAAACAGATTGCACATCAGGAATAATAAATAATAATAATAATAAT
ATCATAATACTTGTACGTGTAAAAGTGTTGCAAGACATACATGAAGATCATCCGTTCGAA
ATATAAAAAGGATGATGATATTTAGCATGTAAAAAAGAAGACGCCATTTTTTTCTTTTTA
AAATACTATCTGTAAGCCGGTCTCTTTGTCTCTGAAAGATAGAAGAAGGAAACCTAGCCA
CATAACTGAAAAGTACCGATCATGTAAAGTTATTGTTCACTTGTCACTGTTATTTTCTGC
CACATAATAAACAGTAGATGTAAGAAAAATGTCAGAAACAAGAAAAATCAAAGGCTTGTC
GCTTTAGTATAGTAACTTATATGGGAGAATGGACGTTTGAAGGCCGAGCTCCATGATGGC
TGAAATTTTTGAAAAAAAAATCAAAATTCAAATTTTTTGGTTTCAAAAAAATCTGAAAAA
AATATGCAAGTAAGGAAGGATTTATGTGTATGTGTGTAAAATTTTAGAATAAAATACGAT
CTGTACTAAAGAGATAAATTCATGACCTGAAACGATGAATAGTATCATGTATTAAAAAGC
CTCGGGTTTGTCTTTTTTGTACAACCCTCATTTCAACGTATTTTTTTTCTGAAAATTTAC
ACACATGTGTGTTACACCTTCACTTATCTCTGTATTTTTTCAGAATTTTTAAAAATGTAT
AAATATAAAGTTTCATGATATTTGAATTTCAAATTTAAAGCCTTCATGGAGGCCGAGCCC
CAAAAGCAATTTCCGCTTATATGGCCATCTCCTCGTCTTAGAGAAGATTTTCGTGCATGG
GCGCAGTGCGCAGTGCTCACTCTGACGGAGCTAGGGAAGGATGGAAATTCATCTGGTCTA
CTTCGGCTCCACCAAAGGTTTTGAACTTTGCATGGAGGTTAGCAACTGATTCCTTGGCTA
CTTGGAAGAATAAACAGAAGCGTAATATATATGGAGATAAACGCAATGTGTCGCAGACTC
TTTTCACACCATGTGTTCATGCATCAATGCACGACGGTTATGGAAAGCAATGTCTGCTGA
ATGGGATCTTCCGTGTGATACAGATAGATCCAAATACGCTTTTCTTTTTAGGGAGATAAA
AGTGGTGATACTCATGTTGCTCGGAGCAAAAATAACGCTAGTCACTTCTTGGCAAATTTT
GAACGATCACAAGGCCGAACTGTTGTGTGACTTGGATCTGGTCCCGATGAACATCTCGAC
ATTGTCAACCGTGACTGTTTTTTTAAATTAGCAACAGAGCTGTTAAGATTTCATTACAGA
AGACAAAGCTGAAGATGGCTGAAACTGCTCGATTTATTTAAAGAGAATCGGACGAAAACT
TGTACAGAACACACCATCCGCAATACCTAACTAAGCTAGGCTTAAAGCACACATAGACAT
ACAAAAAGTCAAAAGGCTGAGCCAACGGAACACAAAGACACATCGTCGAGGAGGTCGGCG
TCAACGTATATCACCATCCGTGCTCATGGCGTGACGACTTCGACTTCACCAAAATTTCAC
CCAATAGCGTTTGTAGTCCTGGATAGTTGAGTAATACAAGTATTATCTTAAAAAATGGAA
AATGTATAGTAACTTATGTGTATCCAGCTTCCAGCACGAACCACGATGGATGGATTGCGT
AAGCCCTGCGCCGGGGAACGCGGACAGCGGTACTGTACGGCGGTGGTTAGCACACTGCGG
CCGTACCTGGTGACTTAATTTGCTGTTTAAATGGTGTCCTGACTCCTGGCAGCCAGCGTG
TGGACTACTATCAGGTTTGATGATGATGGCTGCTGCGGCGACGGGCTTACGGCCTGCACC
CTCACTGGCCAGTCTTAATTTGAAGCTTCACTGCGTGCTGCAGTACGTACTACGTATACA
CTTTTTTCTTCACCTTTTCCGCACATGAAAAAGCTTTTTTCACAGATGATATCAAACGAG
CATCAACGTACGCCGTATGCGTGCGTACGTGCGTACGTTGGTGAGTAGACGTTTGAGAGC
AGATCTACTGTTTTGCCATATATACGCGCCCAGTCTGTCCGTCCGGCCGGGTCAGTCCCG
AGCTCGCGATGCGTCACGTAGCAAATTTAACAAATGAAGCAGTAGATCAATTACTAATAT
GCACGTACGCACGTGACCTCCGTTCCCCGTTCCCATGCATCGTCGTCAGAGAATTAACCC
AACACGCATCACACAGCAGCAGTGAGAGCCCAGTGACCTGTATATGTTTAGTGCATCACG
CAGCACGTACGCAACTCTGCAAAGTAGTGCGTAGGGCTCGCAATAGATGAGCACGTTGCA
CCGTGGCGCGCATGCACCGCACTGCATCGCGTTTGCCGTTGGCGATGCCTGCCGAGCACC
ACCCCACGCCCTGCGGGCACTTTCCTCGTGCAGGTCATGGAAGCATCGACCACATCTCCC
TCCGGCCCTAGCTAGCTCTGCTTGGCTAGCTATGATGCGTCGGTGAAAAACTTGGCAACG
CCGTTCCCGTCACGACTCACAAGGGGTTGTTTGCATTTGCCTATTGGGTAGGGTTAGCTG
GAAGTAGGACTGCAGAAGCGGACGAGAGAACGGGAATCTGCCGCATGCATGCGGGGCAGA
TGGGCCATGCAAATGTCCCAACCCAACACGTACTACGCTCCATCGCCCATGCACCCGTTC
AACACCGCTCTCGGGTGTCTCTGTGTGCACCCAGCCAGAAGCGTGTGAGACTGTCAGATT
CGTTGGTCCCGGCAAATCCGCGGGATTTGAGCTATAGCTAGAGTGCTGTATTAACTAGAG
CCGCGCTGAGGCTGAGAGTGAGAGTGAGATGGAGCAATGTTTATTCCTAGCTTCACTGCC
CGAGATTGCACACGCAAAGGCAAAGGGCTAGGGCTAACCGGATAGCTAGCTAGGCGGGTT
AGCACGTGTATAAGAAACAAGATCTACTTGTAACATATGGAAACCATTTGGAATTAACGG
ATGCTGGCTACGTACATGATACTAGGTAGGATGATGGGGGTGGCGCCAAGAGCTCCGTGC
ATTACGATTGATGCCGTATTGACCAATCCATCCATGTTTGGAGCTAACCATGTCGACGAA
ACCTCACAAATTCTCTCCCGCGCACAGCCAGCCCCTGGCTGAGGCCATGGGAATCATCCG
TACCCATGTGTGATGGTGCACACACGATAGGCCAAAACGGATGAGAATGTGCAGCGATTC
CCTTGCAAGTATTGTATATTTGCACTGCGTTATAGTTTTTGTTTATGCACTCTAGTACTG
CTCAACTAATCAAGATTTATTTCTTCAGTTATTTTGTGTGTCAGTGTGTGTGTGTGCAGT
GCAAGTGGAGCGCGCTCGTGACCACGCTACCGGGCTAATCCACCCGCTCCATGATTCCTC
TCTTTTAAGCGGCCTTGTCCTTTCCCCGGCCCATCCACCCTTATATTATATCGCTCCGGC
CGTGTCACTCTCTTCTCCACTTAACACCAGCGCTCCACTCCTGCACAGTCCTCTGCACCA
GCCAGCGCACGGCGAGCGCGCCGGCATTGGCGCCGTAAGATGGCGAGCGGCTCCGGGGAG
CACTTCCTGAGGCAGCTGAGCTCCAGCAACGGGCTGCAGGCCCCGCAGGACGGGTACGGC
GGCGGCGGCGGCGGCGGGCGGAGGAGGGGCTCGAGGCGGTGGTCCAAGAAGCGGGCCGGG
AGAGGGTACGGCGGCGGCGGGAAGGGTGAGGCGTCGGCGTCGTCGGCGTCGGCCGGGAGG
AAGCGGGTGATGGTGGTGGTGGACGACAGCTCCGGCGCCAAGCACGCCATGATGTGGGCG
CTCACCCACGTCGCCAACAGGGGTGACTTCCTCACCCTGCTCCACGTCCTGCCGCACTTC
GGCGCCGGAGGCGAGGAGGCGCCCTCCCTCGCCAACTCCCTCGGCACGCACTGCAAGGCC
TGCAGGCCCGAGGTATCATACCTTCCATTCTTCTCTACAAGTGTTCTTCTTTTCAGCGAC
GAAAACACTTGCATTTCCCCCCGAAAAGGAACGTATCCCGGCCTACGCTCTGCATCATGC
AGCCAACGAAAGTAGTACATGCATGCACCACTAGTTCGAGCTAGCTAATCGTGCTTCTTC
TTTTTTGCTTCAAAAAATCGCCATTTTAGGGAGCTTGTCTCTAGTATCTACTGTCTAGCT
TGGTTCGGGGGGCTCTCCCTTTGGAAGCATGTGCCTGGAAGCATGCCCAAGAAATTCATT
CTAGTAGTTCACAAAACTTTGTGTTTTACCACCAGTAGAACATGTACTTCGGAGTTCATT
TATTTAGAGCAATTACAATAGTATAGCCAGCTGCTGGCTNNNNNNNATTGTCATGTCATC
TATAGCTCATTTTATAGCCAACATGTACAATAGTTCATTAAAAAAGTGTACTACTTTTTT
ATTATA
