Contig Data
morexGenes
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Map Locations of contig_53919 (4247 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_53919

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67930 1 702 bp MLOC_67930.1 Available Available LOC_Os08g04540.1, FRAME:+2, EVALUE:4e-81, 13108.m00435 protein decarboxylase, putative, expressed





CDS Structure of MLOC_67930






Contig Sequence (4247 bp)

>contig_53919 4247 assembly3_WGSMorex_rbca.fasta
AACCCGGAGTACCTCAAGAACGACGCTACCGATTCCGGCGAGGTCACCGATCTTAAGGAC
ATGCAGGTCGGTGTCGGCCGACGCTTCCGTGGGCTTAAGCTCTGGATGGTCATGCGCACC
TACGGTACCGCAAAGCTCCAGGAGCACATCCGTAGTGATGTCGCCATGGCCAAGATGTTT
GAAGATTCTGTCCGTGCCGACGATAGGTTTGAAGTAGTCGTACCGAGGAACTTTGCTCTT
GTGTGCTTTAGGATCAAGGCAAGTGGAGCCATGACGGAGGAGGATGCCGACGAGGTCAAC
CGCTTGCTAATGGAGAATCTAAACAAGACTGGCAAGGCTTATCTTGCGCACACCGTGGTC
GGTGACAGATTTGTGCTTCGTTTCGCCGTTGGGTCATCACTCCAGGAGGAGAGGCATGTG
AGAAGTGCATGGGACCTCATCAAGAAGACTACCAGCAGTATCATGGATTAAGTGCACTGA
CCTACTACCGCACAACCTCAAGGAGCTACACAAATCCCTATATTTGGGGTACAACTATTC
TTTTAAATTTATCTTTTTTCTATTTTTCTTTGATTTTGGTTATTATTTATTTGGACATGT
AGTTCCAATTCCGTTTTGTAATCTATACCGACCGAGGGTATATATATGTAGAAGGCCGGT
ACCAAAGAAATTAAGTCTAGAGTGTAAAAGGGCTTATAGCCTTATACTGAATAAACACGA
GATACTGTTTTTATTTGTTACTGTACTCTGCTAGCGGGTGACGAATGCATGCTCACGCAT
CTATAGATCAAGAAATATAGGTTGCACTCCGTTAGTTTTTAGGTTTTGAAGATGCCATCT
CGATCAAGAAATATAGGTGACCGTTTGTTTTCAACTTCTCATTAATTAATTGGTCCTATG
TACTTGCCACACCATTCCATCTCCAAAGTTCAGATTGTTTTTAACTTTTCTTCGTTTAAA
ATTACTTGTCACAGAAATAAATGTATTTAAAATTAAAATACATCTATATACATCTATTGT
AATAACAAATATTTTGGGACAGAGAAAATACTAATTAATTGGTCCTATCTACCTGCCGTA
CAATGCCATCTCCAAAGTTCAGGTCGAGCATATACTTGCAAATCTGACTTAATGGTACTT
GTACTGCAGCAATTACAAAGCGAAAACACAGGGTCAAAGTTTTGAAACGGACGTACATAC
TTAAGTGGTTGATTTAATTTACGTCCAACGTTTGACGTGGATCCGCAAAAGAGAGAACGA
TCGACAGGTAATTTCATGTTTAAGTACGTACGCAGCTTAATTAAAGCTCTGAATCAGTCA
AAGCAAAGAAGAAATACAAGTAGCCAAGTGGGAGTACTAGAGTAGAAGAATACTACTAGT
ATAGTAAGAGCATCTATAAGTGATCAAATCCGTAAATTGCGTTTTACAGTTTTGGTCTAA
AAGGTGTGCAGAACAAAAACCGTAACAATGGTCTAACTTATAATTTTTTTTAAAGAGCAC
GGAAAAATCAGACCCGAAACCCTTATTTTTGAAGGTTGGAAGGCCAATTCTAGGAGGCCT
CGTATACGAGTCAAACCTCGTCGAAGCAAACACGCCGTCACGGAGTTTACCGGAATCCGC
CTTAAACTCGCCGGAATTCATCACCGCACGTCGAAAAAGGCCGTTGGACACCTCAATTGA
TCGCCGCTGGTTTGAAATGGACGAGCTCGACCTCGCCATGACCTCCCATGATCTCAGCCT
GGCCACCGGAATCCTCCCAGCGCGGCAGGCAAAGGGGCACGGCTCGACCGGCACGGCTGG
CAACAGAGCAAGGCGCTAACGACTGTGGCGACACGAGGCATGGCCGACGGGCAACAAGGC
GTGGCCGACGAGGCTGGGCACGGCCAACGTGGCAATGAGACGCGACCGACGGGCGACGGG
GCGAGGCCGGCAGGTGACGGGGCGAGGCCGACGGGCGATCGGGCGCGTCCGACGGGGTTG
GATGTGGCCGGCACGACCGCTTGGAGGAAGGGGCGGCGGTCGCCGGACCGAAGGAAGGAG
CTCTTTATTGCACTTTTACATTTTCTTTTACAGTTTCTGTTCAGGCTAGCTAAAATGGAC
CCTTAAAATGTCTTTTTTCGACCGATATCCTAGTTTTACAGTTTGCGTTTTTACACGGTA
TGCTAGAGATGCTCTAAGGGCATCTTCAAGGTTACCCCTAAAACACATAATATATACGTC
TAACTAATCGGTGGGAACCAGTTCACGGACTAATGTGAGAACCGACCTTTCAGCCATGCT
CGTATACATTTCAAATCGGATCCCAATGAACTGAGAGAATTTCATGCAAACACAAATATT
TTCATATGAAACAGACGAAAATAATTACATTTCGGACATATTTCATATAAACCTAGTCTA
TCGCCCACTGCCGCAGTACTCGTTTCTCATGGTATTTATTTCCTATGTCCGCCAACAAAT
TCATCGAAACAAATTCATCGAAACATCGTGAGCCTTGGACGTAAATTTCTGCCTCCGTCA
TGAGGGTTGGTTTTTGGGCGGGGTAAGACGATGGCGGTGGCCATTTTGGGATGTGTCGTG
ATTTTGTCAAGGCAGATGTCCTAGTGATAGGACTAAGTCTAGAAGCCATCACAACTAGGT
GATTGTTTGGATGGGGTTGATCGAGAACGCGAGACAAGGGTTTATCCAGGTTCGGCCCTT
CGATGGAGGTAAAAGTCTACACCCTGCTTTGTGTGTTATTGATTGTGGTCATCTCGATTA
CAAAGGTGTGAAATCGCTAACCTAGTTCTCGAGAATTTCTTGCTTGATCTTTCTACCTCA
CGGGCTACCCTTTATATATAGGTTGAGGCCCTAAGGTTACAATAGAGTTCGGGTCATAGT
AGAACCCGTGTCCTAGTGTATTTTTACTTGTCTTGTCTTTCAAGTAAGGAAAATTACCTT
ACCACTCCCTCCTTGAGCCGGCCTGCCGAGTACTGGTCCACGAGCCGACCTTCTTGATGA
GCTGCCTCCAGGGCCTTGTATTTCAGGGTTTTCGCGGGCCATATAATGACCCTGATTATG
AGCCACCAGTTAACATTCGGGTCATACCATGGGGTATATCACCAACTTTAGCCCCGAGGT
TAACTTGGATTTTTTTATGTTAAGCTCCATCCTGAAAAGAAGCCAAACATTTAATGATGC
TTGTTGGAATCTGTAAGCCAGGAACATTTTTTCAGCTACCGTCTCAAGGTATGCCCCAAA
AAGTCTCTTCCATAGAGACTTCTTCCTTTAATCCCAAATATCCCTTTTTAGTCCCTAAAC
GTTCCTCCTGTTTCTTTCACATGGGACTAAAAGAGACTTTTTTTAGTCCTTACACCAAAA
AGTCCCTGGAAAGAAACACCCCCTGTATCGCCTGTGGTCTTCCTCCGGAGCACGACCACC
ACCGATTCTCCTCTGCCTGAAGTCTGTAGCCATTAAACCTTTAAGTCATCACTGTTCTTT
GTAGTTCACCGGAGACATTAGTTGTAGATCTAGCAGCGTCCGTAGCTTCTCGTCAACAAC
ATGTACTTTTGTCTCCACCACATTCACATAGTGTTGTAGATCCGCAACAATTTTACACAT
GAGATTTTGCAAATGCTTCATTTTCGTCTCTTCCATTGTCTTTTTAGGGCATTTATTTCC
CTTTTCCCTTATTTATTAGATCCATCTGCTCTTCTAGCCTGTAGGGAAAACTGTTTGTCC
ATATGGTAAATTTGTTAAGTCCTTACAGACCCTTTCCTTTAATTCCTAGCCGTCTCGTGC
GAACACCGTGTCATTCTTGCACCTATCAATTTACTATCTTGCCAGCTCATTCAGTAATAT
TAGTCTGTCTTAACTTGCTGGATTATCTAGGAATCTTGTCATTAGTCATCTGTCTTAAAA
CCCATATGATAGCAAGAATCTAGATTTCCCTGAAATACCGTCTTGATATCCTCACCTAGG
CCCATTTTAACCTTGATAATACCAGCTTAGGTATTTGTGTCCGGCTCTTTTATTTATTGA
ATCTCATGACCTGGACGTCGGCTCATTTACTTTTGCTTTGACCTTGCAATTGGTTTGTAA
GAATACCGATGGCCCAAAAAATCAGCAAAGCCTATGTCTGAGTTAGATCCCAAATGCGAG
TGCTTACACTCGAAGATCTCGTGAGCTAGGGTCTTTTTCTAGGTCAGCCAGACATCAGTT
GGCGGGCACCTCAAGAAGAAGCTCCCCCCCCCCCCCAAACCCCCACC