Contig Data
morexGenes
Links



Map Locations of contig_53914 (4873 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_53914

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67928 3 2929 bp AK371016 Available Available None





CDS Structure of MLOC_67928






Contig Sequence (4873 bp)

>contig_53914 4873 assembly3_WGSMorex_rbca.fasta
AAGAGGGTGCCACAAAAGCTAAAAGGCAAGTTCTATAGGACGACGGTTCGACCCGCAATG
TTGTATGGCGCTGAGTGTTGGCCGACTAAAAGGCGACGTGTGCAGGAGTTAGGTGTGGAG
GAGATGCGCATGTTGAGTTGTATGTGTGGCCACACAAGGAAGGACCGAGTTCGAAATGAT
GGCATACGAGATAGAGTTGGTGTAGTGTCAATTGATGAGAATCTTGTCCAACACCGTCCG
AGATGGTTTGGGCATATTCGGTTCAGGTCTCCAGAAGCTCTGGTGCATAGCTGACGACTA
AAGTATGCTAATAGTGTCAGAAGAGGTCTCGGTAGACCGAATCTGACATGGAAGGAGTCT
GCAAAGGGAGATTTGAAGGATTAGAGTATCACCAGAGAACTAGCCATCATGTGCCAGAAC
CATTGAGTTGGTCACAAGATCTTATGGGTTTCACCTCTAGNNNNNNNNNNNNNNNNNNNN
NNNNNAGGCTTTGTTGTTGTTGTTGTTCTTGGGTGTATTTGTTCTAACAAAACATAGCTA
GTATATGCCGTTAGAATTAAGGATACCAATCATTATTCCATTTAAACTATACAGGGTATA
TGCCCTGTAGTGGCAGCTAGTTGCAAGAACCATGCCAATGCACTATACTTCGGCAGAAGT
GTACATGTTGGAGAAATAACTGTAGACAATGATCTTGTACAAGTTTCATAAGCAAGATTG
TCTTAGCAACATAACTATAGACAATGATCTTGTAAAGTTCCATAAGCAAGATTGTCTTGG
CAACAAAAACCACAAACATTATTCTGACCAGCAATTTGTGCCATGCATGCTGTCCAAGAA
TTGGAATGGTCGTATAAGGCACACCTTTAATGGTACTACCTAGACATTTCCTTGAGATAT
GTAAGTTTAGTCAAAAATGGGTAACTTCGTTATGGCATATTTATCCTGAAGGGCTAGTAT
ATAATTGAAGAATTTCCACAGCTTTTCATAATTGGTTTGAAGAATTTCCACAGCTTTTCA
TAACTAAATTGGCAGATGCAACATCTACAACTCTCAAGCTCAAACAACGCACGGTTGCTA
AAAAAATAGAGTGTTGAACATTATTAGATAGCCTTCTGTCTGGTTATCAAATTAGCGATG
CCAAATCATACTTGTTTGTCTTTGGTAAGAGGCTGAATTTAAAAGCTCCATGCCTTAATC
ATGCTTCAATGATTTGGACTTACTACTAAAAATATCAGCCGATTAATCCCTGCTCGGTTG
GTCACCGAGATTAACAGATTTATCAGCCGAAGAACTGGCCAATTTGCCTACTAATCCCCT
ACTCCCCGGCTTACCAAGAAGTTACCAGTTAATGATTTCCAGAATATTAGTTTTATTTCA
GTAGTTTTTATATGGAGGGATCAATCATTGACAAAAGGTGTGCATGTTAATGCAGCAAAC
AAATGAAAACAGGGATACTTCTTGTTCAACCAATGCTACCATAGAAGCATATTTTATACC
ACAAAATAAATTTGCATCACATGATCACGACATAGATTTCAGACTGGTTATACACATCTG
TGTCACAACATGTGTCAAGCTAAGGACATGCAGAAGAAAAAACATCTGCAATTTTGTGAT
TTAGGCCAAGGAACTATTTCTGGGCAGGGATGTAGGAAGATACTGATACTCTGTAACACA
GCACTACTTAGCTAAACATTTTTCATTTGAAAGTAAAGATCAACCTATCATGATGTTCAA
ATGAACCATGCGCATCATGTTGCTCATGGGCGCCTTACAAGCTGATGAATAGGCAGCAAA
CATCAGCATTCGTTTTTTTTTTAGCATACACCTCTAGAAAATAAAGTGCAATAACAGGAC
CAATCAATTCAGGAATAAAACATAAAATTCACATAACATACCCAAAACTAAACACTAGAA
CTTGACATGATCAACCATGGAAAGGCAATTTAATCAATGTTGAGAGGGATGAGATCAGTT
ATCAGACCCTTGTTTAGATAGTACTTCAGCCTAAACTGCAGTAGGTTTCTTCCAAGCGCT
GTCAGTACTCCTCTCCAGCACTTCCCCGTTCTCGTTCTCCTCGCCTTGGACTGGGGAACC
CCTCCTCCCAGAGGATTTAACCTCAGGTGGTGCCTCACGCACCTTCAGGGCCTCAAGCTT
CTCATCAATCTTCCTCCAATCTTCCCCCTTCCCAGCAAGCACTTCCTCCCGTGGGCGGGC
TGCCCCAAACGGATTCCAAGATCTAACTTTTGGTTGAATCACTAGCTCCTCCTCCTGTTT
ATACACCTCCTTCGTCAAGTTCTCCACCTTTGCGGCAAGCACTTCCTCACGTGGGCGTGC
AGCCCCAAATGGGTTGCAAGACCAGCTTTTGGGCTGCAACTCTCCTTTCTCTTCCTCTAC
ACCTTCATCCTCCTCGCCACCAGTTACAACGGCAACCGGTAAAGTTCGCTTCTGCAAAAC
AAGACGCGGACGGGCACTGCTACCACCACCACCACTGCTTACCTCCTCTCTCTTCCTTGC
CCAAGAATCAGCATCTGAACAACCATCCCTATTGAAACCCCAAACTGACCCACCCCTTCG
GCCATCCGAAGGTGCGGGTGGCGGAGCAGAGTAGCTCTTGTTGGAGACCCAGCTCGCGGA
ATCGTCAGCGCGTCCCTGCGACTCGCTACCAAACGCGCTGCTACGCTCCCTCCTCTCCAT
GGGCAGAGAGGGCGCCGTCTTCTTGGTGGACACCCAGTCGTTGACGTCATCAGCACGCGA
CGAAAACGAATCACCGCCAAACCCACCCATCCGCTCCCTCCTCTCCATCGGCTTCTTGAC
ACCCCAATCACCCGCCTCGTCGGCGCGCGACGGGCCGTAGTCCTCCGTGCCAGATCCGCC
ACGTCGCGGCTCGTCGGAGCCGCGAGACACGTTGCCCCAGCGTGCCCCGCCGAGCTCCTC
CTCAGTGCGCTCGCGGGGGCCTGTGGGGAGGCTTAGCAGCATGTCAGGGGTGGGCCCGCG
GGAGGAGGAGGGGACGAACTTGGCGCTGTTGAACGAGGCGAGGGAGACTGGCTGGACCTT
CTTCTTCTTGGGGACCTTGGTGGTGGCGGCGGTGGCTAGATCGGGGAAGTCGGAGGCTGG
GACGGGGGGCGGCGGCGGGGGGAGGTCGTCCTGCTCCTCGGCGGCGAGGGCCCATGAGCC
GGGCTTGGCCCAGGCGGAGGCGACGGCCATGTCGTCGAGTGTTCCTGCGGCGCGCTCTGG
TTGTTGGTGTGCGTGCGGTGTGATTCGCGGATTATAGGATGATGACTAGAGGCCAGTGAA
GGCGGAGGAGGTTAGGGTTTTATCGGACGGACGGGGTCTGGTCTCGTGGTCGTGGGCTGA
ATGAGGCCCGGAGAAAATAACGCATCCGCGGCTAGAGCATCTCTAGCACATCTACGTCAA
CTAGTTAATTATCCGTGTGTTGCCACGATACATATATATTCTTATGATTCAACATCAATT
CTGACTAATAAAATATGTAGAATCCTTGTGTATATGAGTTTTTTGTATTTCTTGTTGTTC
CTTCACCTATTTCTTCCACTTCTCCAATCCAAGGTTATGACCCTCGTCACCACTTTGATG
ACGCACCCTGCTTAATTCTAATCCACGTAACTTGAAAAAGCACATAATTCAGTTATTTTC
CTTTCATGCACGGAGAGTACACAGTAAGCCGCTTAGTCGATCTAACACATTTTTCTGTTG
GGAAATTACCATAAATATCGTGTACAAAGATGTTCTCACACAATAATTGTGTTATGCAGC
GTGAAAGAAGACCTTGACAAAAAAATAGAAGCAATTATGTTTCCATTTTAATTTATGTGA
CATATCTTATGAATGAACGAAATTCAAGATTTTCATTCTTTCAAAAGAAAATCTTCATTC
TTCAAATTTTCTTTATGCTTGATCTTCGTCTTCGTTATCACCTTAAACATTAAAAAAAAT
GTTCCGTTGCAACGCACGGGCAACTTACTAAATGCTCATGTGTTGCCACGGAACAAAAAT
ATACTCCTTGCATCTTATAATGTAGCTTGTAAAAACATCTTACATTATGGGATAGAGGTA
GTAGAAATCTCCTACGAACAAGATTTGTGCTAAATGCTTGTGTGTTGCCACGGAACAAAA
ATATGCTTCCTGCATCCTATAATGTAGCTTGTAAAAACATCTTACATTATGGGATAGAGG
TAGTAGAAAATATTAATATGAAAAAGTATGAACATTTTCTCACTCACAACAAACAAATGG
TGATTTTAGAGATCAGAAACAGCGATCACATCTAACATATGTTATCATGGTTTTTACACT
GAATACAAAGTAATGAGACATCGGAAATAAAATAATAGAGTACAACCATACATGTACCAT
TACCAGGCAAGCATTTTAGTGAAAATATAAATCAGACCAACATGTTACCATCACCAGCCA
AATGTACAATGCTCTATGGAAAGGAAGTTAAGTTTGATACCAAACACCACACTAAACATA
AAACCCGAATAAATCTTTTCTTTTGTGACATTTCACCAACCAAGCAACCTAAGCTAATTA
TTCACCACATACATCATTTGGTCGCCGAGCAGATGCAAACCCACACGTTGCACAACTAAA
GATGGAGCAAACCAATTAACCAGGGTAACGTATGTTGGCTCAAAAATCCCGCTCGATCAG
GTAGTCGCCAATCATCTTCCATCTCCATGACTCATGGCCATTGTAATATTTTTTTCATTG
TAATAACTTTTTTTCCAAAAATGAGGAAAATCTTTTGCCTCTGTTTTTCAAAAATATATT
ACAATGGCCATGTCACGCCCCAAGATGCGACCCTATCCTCAATTTGACACGAAGGCCTCG
TCAGGAATAGAAG