Contig Data
morexGenes
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Map Locations of contig_53886 (4283 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_53886

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67906 1 1673 bp MLOC_67906.1 Available Available LOC_Os06g05300.1, FRAME:+2, EVALUE:3e-112, 13106.m00510 protein transferase family protein, putative, expressed





CDS Structure of MLOC_67906






Contig Sequence (4283 bp)

>contig_53886 4283 assembly3_WGSMorex_rbca.fasta
ATGGCGAAGTTAGATGGTGATGTGGGGCGCCCACGCTGTTATGGTAGGTGGGCCCCTGTG
ACCTGCGCTATAATAAAGAGGTGGGGGCCGGGGCACACGGTACGAGGTTAACCGCGCCGC
CAGACTCCCCACCAAAATCCCCATCCGGTCTAGGGTTAGCGCAGTGCTCACGGGAACCAC
CTCCTTCGTCTAACCTTTCTTCTACGTCTTCGACGCCACTACTGCACCGATGACCGGCGC
AGGGACTTCATCTGGCTCGGGACTAGTTAAGTGCAAGATTGAACCGGATACATCTATGCC
TAGTAGATCCACGGCTTCAACAGGAAGCTCAAGGTCTACGAGACGGGCTCCTCCTTGCAA
ATGAAGTTGGGTGCAACAAAATCTGTGTCTTGGCCGACTGCATGAAGGTCGTCAAGATCA
TATCTGCTGGAAATTCGCTAGGACCAGAAGCCGCAATTTCAGAAAGTGTTCCTTTTTAGT
TAGAAATTTTAATTTCATTTTGTTTTCTCATTACCCTAGGGAGGCCAATGTGAAATTAAT
TTGTTGGCTAGGAACTCGAAGACCTCTCGAACCATTGTTTGAAAATCGAAGCCTTAACAA
ACTACTCTCTCTGTTCCATAATATAAGTCTTTTTAGCGATTTCATTAGAGGACTATATAC
GAATGTATATAGACATGCTTTAGAGTGTAGATTCATTCATTTTGCTTCGTATGTAGTACT
CAGTGAAATCGCTTAAAAGACTTATATTTAGGATAGTATCAATTCTTGCGCAGGAAATAT
AAAATGTTTTTTCCTAGAAAGAAACTGTGAAACGGTTCGTCGGCTACCTTTCCCTTCCTG
TCACCGGCCACCAGACTAGGATTCAGCATGCGTCGTCTGTCACGCGCGCGATGCCACGTA
CATGCATGTGTTGCTCGATCATGCCGATGCCTGCGACAGGAAGCTGGCCTGGAAGCCATC
CATGTGTTCCCGGCCAAGCGCCACCGACACCTGCACCGCGCCGCCACGCGCTCCGGCCAG
CATCACCATCTCAGCGCTGAAGGTGGACACGATCTCCACCCGGCTCGGCTGCCCCCACCC
GAAGTCCACCTCGTACGCCATGAACCGGTGCGACGACCCTTGCCTGGCCAGCCTATCCTG
CGGGACGCCCCGGATCCGGATGGTCTCCGCCCACCGGTCGGCGTCGCCCAGCGGGTCCTC
CACCTCGACGTGCTCGCGGATCGCACGCCGCACGGCCGCCGCCGCGTGTGCGAGCGCGCC
GTCATCGTCGTGGCCGTGGCCGCAGAGGTCGGCCGTGCTGGCCCGCGCGTAGCAGACCTT
GACGCAGTTGCCGAAGAAGCCCGGGTCCAGAGGTGGGCGCAGGCGCCGGCGGCAGTCCGC
GGGGAACACGAAGTAGGCGTCGGCGTCGTCCTCTGCGGCGGCGACGGCATGGTTCGGGGA
TTTGGCGCGGACGATGGACGTCCAGAGCAGGGACGCGATGGCGATGTAGGTGGTCGGGGG
CTCCTGTTTGCCGCCGTTCTCGGCACTGGTCTGGCCTTGTTGCAGGATGCGGTGCTTCAG
CGACTGGATTTGGGAGGCGGTGAGCAGGTAGGTCCGCCTGCACTGCCGCGTCCAGTCCGG
CTCCGGGAGCGTGTTGACTCTGGGCAGATCCGGCGCCGGGAGGCGGGCGAACTCGCGCGC
TGCCGCCTCTGCTTTGGGGTGCCGCAGGATGCCCGCCCTGTCGAATGACGGCGGCGGACC
CGTCGCTGCTTGCGAGCCCTGCCGCGACGCGCCGGCCCACGCCCTCATGAACTGCCACAG
CGACTGGCCGTCGGCCACCGCGTGGTGCATCGACACTCCGACCGCCACGGCGCCCGCTCC
CTCGTCGTCTCCCCGCGCTTGTGCCGCCCGCGTGACCTGCACGGCGAGCACGGGCGCCGG
CAGCATGCGCACATCGAGCTCCGGGACGAGCTGCACGAACGCCTCGGTGTCATGCTCGGC
GTCCCGCGCGAGCCGGCGCATGTCGGCGGCGTCGCCGGAGTACTCGGCGACAACGAACCT
GACGCCGGGGTGGAGAGCGTCAGGGGAACAGTCGATGACGAGGTCGTCGCCGGGGCAGGC
CGCGATCCTCCCGGCGAGCGGAGGGAAGATGGCTAGCGTGGCGGCGAGGGAGGACCGCAG
CGAGCCGACGAGCGCCGAGAACGGCGGGACGTCCTCGCCATCGTAGAAGAAGAGCCGCTG
GATGGGTGGGAGCGCGAGGAACAGGGTGTCGAAGAGAGACAGCCTCACGGCGGCGGGCTG
GTGGACTGTGGTGTGCCCAGACATCTCCGGCCGGACATGGGTGGTCTCGAGAACTCGCAC
GCGGATGTTCATGGCGGCACCACCGCACCAAGGAGTGCTAGCTAGCTCACTGCTGGATCA
GTGGTGTATTTGGTGGAGCAAAGTGCACCGATGAGTCGTGTGTCCCGAGGGAGGTGCGAT
TGCGACGACGAAATATTGGACGCTGCCGCAACCGCTCGCTCGTCGTTTTTTTCTTGGGAG
TAGCTCCAACCGACACCAGCCGTTGGATTATGGGGATTTATGCTATTTCTATTATTTCTT
CAGGAGACAACTGGGAAATACTTGTACTCCGTATTTCTCAATCGACTAGCTCTAAACGCT
CCCTTTCTTATTCTATTGTGAAACGTTTATCTATGACGAACCAACGTGTGGTTGAATGGT
TAGAACGACTGTCCTATTCTGAGCCCATTAAGGTTTTAAGTTTTGGTATTCGTATCTTTT
TCTGGATTTATTTTAGAATTTTCGGCGATGTGTATTCAGTGAAACGAGACGTTTTTGTCG
ATGACGAGGTGTCTATAGTGACTTCGTAAATTTCAAGATGATATGACGGTTCAGTCTTTC
AAAAGTGCTCATAAGGATAGAGTGTGCATGTGTATCTTTATAGGGATGAGTGTATGTGCA
TGTATATGAGCGTTTGCGTCTGTACTGTGTTAAAAAAACGTTTATCTGTATAACGTTTTA
TATATCTTCTCGAAAATTTGAAATTTATATCATTTTTAAACAATCTAGGTAAATTATTTT
GTAAAAATAGATGAAGATTTCATATGAATGATGGGGCATTCTTCTTCATAAAAGCACTGT
TTCATAGCGAGCGTGTTGCTCGTTGATCATACAATGTTAAATAACAAATAGCGCCCTTAT
ATTTCAGTTTCCGTTTACATAATTTCTTTGTGCCAGTCAGATGGATCTAAAAAAATCAGG
ATTGAAGCAGTGAAGCAAGGGTATAGCTCGTGGCCTAAGAGCATCTCTAGCAAATTCTTT
AAATCATAAGCTGTAAAACTGAAATAAAAAAACTTAAAAAAACACTTTAAGGGTTTATTT
TAGTTACTGTAAAACTGTCAATCTTGTCCCTAAACCCTTGTAAAAACCCTTAAAACTGTC
AATGTTGTCCCTAAAGGGTTAAGGGTTTAAGGGAGGTTCTTAACAAAGCATTCTTAAATA
TTCTTAAAACTGTAAAACTGTCAGTCTTGTCCCTAATGGGTTAAGGGTTTAGGTTTCTTA
AAAAAGCATTCTTAAATATTCTTAAAACTGTCAATCTTGTCCAATTCGAGCCGGCAGCGA
TCAATTCTCGCGTCCAGCGGCCTTTTTCGGTGTGCGGTGATGAATTTTGGTGAATTTCAC
GCGGACTTCGGGAAATTCCGTAATGACGTGTTTGCTCCGACGAGGTTTGACCGGTATATA
GGGCACCCTCGGTTCGGTCTTCCAACCTTCAAATATAAGGGTCTCGAATGAGGATTTTCG
ATGCCCTTTAAAAGAATTACGGTTGGACCATTTTTACGGTTTTTAATGTGAACATTTTTT
TCAAACAAAATCTTAAAACGCAAAAATTATGAAAGTTTGATATTTCCAAAGATGTGCTAA
AGATGTTCTAAGTGGTGAGACTAGCGAGAACACTCATTAAAGGGAGCAACTAGTTAGCGA
GCGCTCCTTCGGGAGCCTCTGAGCGATCGTTCCCGCGCGCCGCCACTTGATGCGTTCTCA
GCCGCCGCCACGTGTCGCGTCCTGAGCGTTCCCTTCGTATTTTGATTTTTTTTTGCACGT
GTTTTTGGCTTTTTAGAGTGGTTTTTCCGGGTTTTTTTCGCACGGACGTGCCTCTCGAAA
AGAGAAAAAATACTGCTCTCTTTTTTATGTGAGAGGCACGGTTTTGACCGTGCCTTTCAG
AAAGGGGAAAAACGCATTTTCTGCTCTCTTTTTTTACGAGATGCATCGTTTTGCTTACGC
GAGAGGCACGGTTTTGCTATCGC