Contig Data
morexGenes
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Map Locations of contig_53836 (4112 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_53836

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67886 1 1316 bp MLOC_67886.1 Available Available LOC_Os03g11370.1, FRAME:+1, EVALUE:2e-72, 13103.m01281 protein B3 DNA binding domain containing protein, expressed





CDS Structure of MLOC_67886






Contig Sequence (4112 bp)

>contig_53836 4112 assembly3_WGSMorex_rbca.fasta
ACATGTATTACGGTTTCTGGTTAATTCAATTATAGCATGAANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGGGCATATTTCCAACAGTCCT
CGCACAAATTCTGTAATTTTGTGCCTCCTAAATCATTTATGTCTGATTCATTCATAGGTT
TCAATGCTGCTAAGTTTTGAATAAAATCTATGGTTCTGTCTGCTTCTAAGTCAAGAATAT
CATTTGTAGATTTAGCTATTTGTTTACCCGAGGTTCCTAGAGAAATACCTATGCCGCTAG
CATTCTAAATGATCTCTGAATCAGAAAAGTGCAATATTGAAGCAGTAGGATCGACTGACA
TACCTGTAGTCGTCTCAACGTCTCAAAGCTTTGCGGCCCTCATGGCACGCCCTAGCAACA
TGTCATGAGCATCCGGCTGCTCCTGGACATGGTGGCTGAAACGTCGTTCTCCGGAATTTT
TAAAATAACTGATCATCTACTTTATAAAAAGTTTATNNNNNNNNNNNAAAAGTTCGCCTA
TTTGAGGAATAGTTCATGATTTTAGAAAAAACTTCATCAATTTGTGAAAAAAATCACCTA
TTTTGAAGAAAAATTGACTAACTTGAAAAAATCATCATTTTAGAAAAACAAATGGTGCGA
GGTTTAAAAAGCTAACGCATTTAGAAAGAAAAAGAAAATAAAAAAAGAAAAAGAAAAAAT
AAAGAGAAAAAGAAAACAAAACAGAGAATACTGCGTTCGTGGAGTCTTTTATTAGAGTAA
AAAACAATTTTAGCACATGAGGTCTTGTTGCCAAATGGTTATTGCAGCTGTGATAATACA
TTAAGGTGCATGGTTTGAATCATGCTTCTCACATTGGTTTTTGACGGTTTAAAAAATAGA
GAAAACATGAACTTGCCTACCCAGCAAAAGAGGACGTGTACGTATGAAAAAAATACATTG
TATACATGAATACGATCATCCTACCCTTTATTACGAAGAGGTAACGATTAATCTGGCCGA
ATGCATTTACACTTTTGGGCACTATGCATCAGTTGCTTCACATGCACCACTGCGAGTTCG
AGGTAATCCAACAGCCCAAAACTGGAGCTTGGTACAGGTGATCAATGCGGCTGTCCCTTT
CTTTCTTCTACAAACTGGTTCGTCCTACACCCCGCTTTGCTCACCCTCGGCCAGAGCACC
AGCAGGCCAAAAATGGAACATGGTACAGTGATAATTGCGCGGTCCCTTTCTTCCTTCCAC
AAGCTGGTTCCTCCTACACCCCGCTTTGCTCTCACTCGGCCAGAACCCCAAGCAGCAGTC
CACCGTCGCTCGCAGGCTGCCGCTGCCAAGAGGGCGTAAGGTCGCCACCGCCGGCTGCGC
CCTACGACGCCGCTTCCACCAGGCAAGGTGAGATGAGCTCGAAACGTCTGTCATTCTTTC
TTTGTGTTCGTGGATTTGGTGTTAGAGCTTTAGTGAATGCAGGGAGCCATGGAATTCATG
CCATAGTAGGTTGTTAGGATCCGTCTAACAGACGCTATCCTTGTGATTGTGAACTGGGCA
AAATGGGCGGCATCTGTTCTTGCTCTTACGTACCCCCCTGTTCTTGGCTGCTATACTGTA
TCATTCTCCATCTGTTCTTCCCCAAATCTTGCATCAACTCTGAGAAAGCGCCCTAGCAAA
ATGCTGTAGGAGGTGAATTCGGTTCCAATCCTCACCATCTAAGCAAAATATTCATGTATG
CAGAGACGCGTGAGATGGACGGCTTGGAAGGTTTCGAGTTCTTCGAGATCATCCTTGAGA
ACCCCTCCAGCAGGCTGGTATATACTACAAGATCTCCCTTCCCTTTGTGCACATTTCTTT
ATCGCTCTGCTGTCTAGTGTTTGATCGGATCAAATCACTGCTTGGCCCTCGCTGCAGAGA
CTGCCTGACAAGTTTACGAGGGTGCTACTAGACGGCTTCAAGCCCAAGGAAGTGAAGCTG
CGGGAGGCCGGCCACGGGCGTCGCTTCTGGGGCGTGAAGGTGGTGTTGGACGCCGACGGC
CACATGTATCTAGGGCGCGGCTGGGAGCAGTTCGCCCGTGCGCACGATCTGCGGCTCGGC
TACTTCCTCGTGTTCAGCTACGACGGGGATGCCGTGCTCACCGTCAAGGTGTTCGACGTG
AGCATGTGCCGCAGGCACTACCAGCATGACGGCGATGCCAGTACGCACATCTTCTTCCTC
TTCATTGTCTTCGTGTCAGTACGGTGGTTGTAACCTGTAAGAATTAAAGAAGGATGGTGT
TCGCATTATTTTGCCAGGCAGTGGGAGCAGCAGCGACGGCGACAGTGGGAGCAACAACGG
CAGCGTCGGCGACAGCGGCGGCGGGAACATCAGCGGCATGGTGGCGACGATGGGGATCGA
CGACGGGCCGACGTCGCAGTTCACCGTCATGCTGAGGGAAAGCAACCTAGGCGTGAGGCA
GAAGCAGTACCTTGTGAGTCGTCGTTCATGGCTGCTCGAGCACTGCTAGTCGAGCGTGTC
ACTGACCCCATCCGCTGCTCGCCGGGCGTGTGCTGTGCAGAACGTGCCGGCGGACTTCCA
GAACGCGCACGGATACGGGGAGAGGACGAAAGTGGAGCTGCGGATGCGCGGCAAGTCGTG
GTCCGTGAACCTGAAGCACAGCCCCCGGAACCGTGGCAGGCCCCGTGCGTCGCTCAGGTA
CGGGTGGCACCAGTTCTGTGTCGACAACGGCCTCGGTGTCGGCGACACCTGCTTCTTCCG
AGCTCTCGGCGACGGCGGCGCCGGCGACACCCACCTTCTCAAGGTGGAGGTGAGGAAGCG
AGACGGCGGCTACGTCGTCTGAGGCCTCCGGTTCATCAGCCTGGTTGGCCGGCGTGACCT
CGTCCGTGGCCATCGGCCGGCACCACTCACTGCGTTATTATGCTTGCTTAACAATAATTG
TAAGACCTTAATTCTTCATTCTTGGTAGCTCGACTGATGGAGATGGTGCTACTGGCAGGG
TGGGTAACTAGAGAGTGAAGCTGGATGATGAATTTGTTCTTGTTGAGATTGTGGCTTTTT
AAAACAGGATGAGTGGCATGCATCTTGTTAATCCCTCATGATGATAGGGATGGGTGGCAC
CAGTTTCACCAACAACTCAGTGCTACAGCGTCATTTTTATCAAACTTTTGCATGCAGAAG
GAATGATCTACGCTGTACGCTCTGACCTTTGATTGCGAAACGTACAATTTGAATCGATCC
GTTGAATTTTCTCAATGTTAACACACGCACCGGTGAATCAAGTGACGTCGGGATATGGCG
AATGTTTTTATCTTGGGTATGCATGACGACTTAGAAACTTCTCTATGTCTGTCGACAAAT
ATAATATAATCGCTCCTGATGGTAAATTAATATTTTTGAACCGGGATGGAAAATTTATGT
AATAATCACCATCATCAAATTCTCCATATGCAAATAAAAAGCGGGTCAATTGCTCATGTG
GGACGTTTTTGATATGAAATGGCTGCAAACCGGTATCGTTGGCAAGAATGGCTATCCTAC
GACACCTCCATGCGCACAAATAGCCCAAGCGCGACATGGCCCTTAAACATAATATCTATC
AGGATTAGGTGGAGCCGGGCGGGACCCATAGTTTATCCACGTAGGCATGGGACCCAGATG
GCGGCGACTACTGTCAAACAATTTTTCCCTACGCGTGCATCCTCCCTCTTCTTCTTCTCC
GACGACGAAGCACGGCAACGCCGGCAAGCTCCGATTCAGAAAAGCAAATATACAAGCATT
TAAAAACAAATTGACCGAATTCAAACAAACATAGATCCATTTTCCCACCAAACATTCCAG
AAACAAACATAGATAGGGTTCGATTACAAGGGCTTGTCGGAGCAATATTCCTAAGACGAT
TACAGGTTCGTCCTTCGATTACACGGGCTCCTAAGCTCGCCCCCCTAAGCTCCTACCTCA
CCCCTACTATATCTCCAAAAGTGGGCTCACCTCAGCCCCAGGGGTGCGGCCCCGACGAGG
CGGCGGCGCTGGTCGGTCGGAGTCGGAGTCGGAGGCGCCCCACCCCCTGTCGGCGCGGGA
TGCCTCGATGGCTTGGCGGAGGCGGATCTCGT