Contig Data
morexGenes
Links



Map Locations of contig_53805 (2808 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_53805

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67874 2 1353 bp MLOC_67874.1 Available Available LOC_Os01g09590.1, FRAME:-2, EVALUE:9e-80, 13101.m01025 protein myb-like DNA-binding domain containing protein, putative, expressed
MLOC_67873 1 451 bp MLOC_67873.1 Available Available None





CDS Structure of MLOC_67874






CDS Structure of MLOC_67873






Contig Sequence (2808 bp)

>contig_53805 2808 assembly3_WGSMorex_rbca.fasta
AGTCTCTTGGATCCAAGCACCCTCTACGTAAAATTGTCTTGTTTCTGGCAGTCAAGCAAG
GATAATATATACCCTGTAAAAAAGAAGCATTTACTTGCTCGCGAGACCTGTCATCAATCA
ATCGGAGGCTGCGGACCAGGAAAAAAAGATGTGCCTGCCTCTATCATCGCACAAGCGTCG
TCATTAGCCCTGCGCTAATCAGTCATCACCCCGGCCAATTTTGTTCTTGCCGTGGGCCAT
GCCTGTCTCTCAGTTTTTTTTCTACGTTACTTTTTGGTGTAGCCTATCGCGCCCACTTGG
CGGGCGGGCGACCGACCCGACCCGGCGCGCATCATGCAGGGACGGAAGCGAATCTTCAGA
TCGGTCATGGCTCATCATCTTTGGCATTGGCACCCCTCGCCCGTCCCATGCCAATTGCGT
GCCACCACCACGGCCTTTCACATGGACGCCAACAAGTTATACATATGTGTGTGTGATCAT
CTAGGAGAATATCAGGATGAGTGGCACAAAGTTTCTGCTCAAAGAACTGTAAACACTTGA
AAAAAACGTGGACATGGAAGCATGCAGATCGAGGTGATCAGGATTCAAGAACCACATTTC
CCGTTTGCGACCGTACGTACGAAGATCACCTTTTCCAGAGCTTGTATCTGAATTCACTGA
TGGAGATCGAGCGCCTGGGACAAGCACGTCTGATCGATCAAATCACGAGATCTTCTACAC
TAGTGACAAGGTCGGGTCGAGAGGGTAGTAGAAGCCGCCGAGGAACTGGTCGGCGACGGC
GAGGTCGGCCCCGGCCGCGCAGAAGTCCACGAAGAACCCGCCCGCGTTGTCGACCGCCGA
CCAGTTGGACCCCGACGACGCGGCGGAGGCCGACGTCGAGCCCTCGCCGACGAACGCGTC
CTGGACCGCGGCGGATGCCGACGACGAGCCCTCTGTGGCGAACGGGTCCTGGACCGCGGC
GGAGGCCGACGACGAGCCATCCGCGGCGAACGGGTCGTGGAGGCCGGCCGTCGGCGCCAG
GAAGTCGTCGTAGGTGTATGTCTCGGCCTTCACGGTCGGCGCGGGGAGCGGGAGCAGCGG
CGATGGGTGCGCGTGCGCGTGCGCTGCGGCCGGAGTGAAGGACGGGGGGCGGCGGGAGGA
GGGGGCAGCCGGGAAGGCGGCGGCCGCGGCGACGAGGCGCTTCTTGAGCTTGGTGTTCCA
GTGGTTCTTGACGTCGTTGTCCGTCCTCCTCTCCAGCTGCGACGCTATCAGCGACCACCT
GCCATGAATGCCAGCGCGCGTCCGCGGCCGTCTCCATCGGTCATGCCGGCCAGGAACCGA
AAACGATGGCCTGCCGATCGACAAGGAGAGTGCATGCTTACTTGCTGCCGAGCTGGCTGT
AGAGGGAGTAGATGATGGCGTCCTCCTCGTCGGTGAAGCCGCCGTGGCGGATGTCCGGGC
GCAGGTAGTTGAGCCACCGCAGCCTGCAGCTCTTGCCGCACCTCTTGAGCCCTACACACA
CACACGACGGAGACACATCAAGAACGACCAAAGGCACGGCCGGGCATGGAAGGGGCAGCG
AGCGAGCGAGCGAACTCACCGGCTTTGGCGGGGAGGGTGATCCAGCTGCCGGTGTTGCCA
TGGCGCTGCATGTAGTCGCGCAGCGCGTCGTCCTCCTCCGGCGACCACGGGCCCCGGTTC
ACCGCCGCCCTGTCGCAGCACGGCGCCCTCCCCATGGCCCCGGACAACAAGAGACGAGAC
AACGGGGGAAGGGAGGACACGGAGAGGCTCAACTGAAGCGACCGGACGAGGACGTACGAC
TGGCCGTGCTGCTGCGCCGAGGCTGATGGGCTGCCGCTACTTGTAATTGTATCGGCTCGA
CCCCGTACGTCGTCGGTGAACAGAACGGTGCGGTCTTTAAAAAACCGTGCTCCTATCCTT
CCTACGCATCCTCTGGGTCTGGGGTGAAAAAAAGAGCGTCGAGAAGAGAACGGGGCGGGG
GTGGGCGCCGTGCACCGACCGGGGCGTGGTTTCCCATTTGGATCTTTGATTCTCTGCTGC
TGCAGCGGTTGTTCTCCCTTTCACAGTCTCCTTTTTGGGTCACGGGGCCCAGTGTGGATG
TGGTCTCATCACATTGTACGCGATCGAACCAACATTGCCGATTCTCCTGGCAGATGCTGT
TCTGTTTTTTTACCACTGGTATATATACTTGCTTTTTCTTCCTCGCATGTTATTACTTCT
TTTTACTGCCTGTTTCGTGGTGTGTGTTTTGGTGAAAACTTCGAACATCACCTTGCTTTT
GCTTTTGTTTACTGCGACGAAGAGCCCTCCTGCGTTCTTCCACAAGATAAGGATGCCCAG
CCGCAGCGATGTGAGCGGGCTTTGGCTCATCATGACTCCCCCCAAATCGATGCTCGTCGC
CAAATCTTCTGGCATGATTACCGCCGTGCAGCCCCTGTGGTGTTCTTGCTCATTTTGTCA
CCGATATCTCCTTGCCTTTGACGAATCATTCCGTGAGACACACACATGCACACCACGTCG
GCATCACCCATGAAGACCATGATTAACAGCAACTCTAGGAGACACATTAAAGTGATCAAA
CCCAAAAAAAAGGCAATATATAGTTTAGCTCATAAAAGCGGTCATATCTCGACGCGTCGC
GGTCATATCTCGACGCGCCGACGTGTAGTTGGCCGGAATCTATCTGAAACTCATCGGATT
CCGTCGTCGCACGCCGGATTTTGCCGCCGCCGGTCTGAATTGCGACCAGCTCGACCTTCA
ACGGACAGGACGGAGCAGGCTACCGACGGCCCGAATCAGGACGGGGGG