Contig Data
morexGenes
Links



Map Locations of contig_53761 (5297 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_53761

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67844 4 2499 bp AK367971 Available Available None





CDS Structure of MLOC_67844






Contig Sequence (5297 bp)

>contig_53761 5297 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCCCCGCCTCTCTGACTTCCCCGACGTATCGGCGGCCCGTCCACCGCA
TCTCTGACTTCCCCAACCTCCCGCAACCGTAGAGGAAATATCTCGACGTCCAGCAGCGAA
TGTAAGGGACGTGGGTGGTGGAGATTATGGACCGCGATACCCACACCAGAAAGTGGCTCG
GGTCCATCCATACGACGTAGCTCGAGGTGCTTGAATATGACTGGTGACAAGCCCGGTTCC
ACCGCACGGAGGCGCGCCTCAATTTATCGAGGCCGACGACACCCGTCCACCTCGTCCCGC
TAACACCTGGAGTGGTGAATGCGGCCATGGCGAGGGAGCGCCGCGAGGTGAAGGTCGTCG
ACGAGAAGTACATGGTGAAACTCCGTCCCCAATACCCCTAGCTATTGGAGGCAGAGCGAG
CGATCTTCGCGTAACACACGTTCGACGGGGAGGTCATCAACATCTCCGACGATGAGGAGC
AAGAGAAGGAGTTCGACCTTCAAGAATGTGGCGCATCTTCCCCGACCCCGACAACGATGA
CACCAGCCCAGACCCAATGGACGGTGATATGAGCAGGCAAGGTTGTCTCGACCTTGCTAA
GGGTGATGATGATGAATTGATGATGGTGAAGAGTAGTTCTAGTTTTAAGTTTACGTTTAT
TTTAGTTCTAATTTTAAGTTTTAAATTTAGTCTAAATTTTAGTTGTCAAGACAATGTGTT
AAATTTTGATTGTTTAAATTCGGTTGTCAAGACAATGAGATGAATTTTTATACTTTTATA
CAAATTTGAAATGTAGTATATATATAAGGGATCTGTTAGGTCCGACAAGAACTTAGTGAA
GTAGAAGCAGTTCACCAAAGGTTTATTACTCAGTCGGATCCTTGGTTATATACAGGGAAT
CAGTTAGAGTTGCCCTAACAACCAAACGTGGTGCTTTCGGTTTCCCCGAAGCAATCTCTG
TGCTTTCTTTTCTTTCCCCGTGCGTGCTGCCCCTGCAATCATGCGGCAGCCGGCATGTTA
TTCTTTCCGGGGAGACTGCTCTCTGCCTGCTCGCCATCATCACAGCGCTGCAAAGCCCTT
TTGCCGCTAATCACAGCGGCAGGCAGGCAACAAGATTCCTAATCTCATTCTCCATCCCCC
ATCGGGTCGTCAACCGGTTTACCCACTCCAGCTCTCGGTGTCCCGCGTGTGCTTGGCGCC
TCGGAAACCAAACCAGCACAGGTCACTCGCGGCGGTGGTTCGGCCGCCCCTTTCGCTGGC
GCGTGCGCGAGCACGACGGGACGCCGCTAGCTGCCGCGGCCAACAGCGGAGAGACGCACA
TTATTATTTTGGCGCTGCCCGGCTACCTCCCGCCACTGCCACTGCCACCACCCCACGTTT
CCCTCCAAGGCTCCAGCGGTCCGGTCCAGCCCCATGTGCCTGGCCTCATCTTCTTCCTTC
CGCCTCCATTCACAGTTCACACACACGCCTCGCCGCCGCCACTGCTCACTATACTATTGC
GCTGCTGCCGACACGGCACCCCGGGCCACCCACTTTCCGCGTCGCTGCTGCTCCGCCGAT
ACCGCGGTGCCTGCCAGCCAGCCAGCCAGCCGATCGATCTGTAGGCCAAAGCATAGCAGA
GAGCACCTAATTTAGTCTTGCAAGTCAGCCGAGGCCGCGGTGCCCCCAAGTACACGATCT
GATCCTCCCTTTTCCCTCCTCCGCCCGCCACCCTGAGCTCGAGCTGTACTGCCCCCCGCC
GCCGGCCAATCATCGCGTGGCCACGGGAAAATCTCCGTACCCACCGTGGGGGCGGACGCG
CTGGTCAGAGCGAATGAGAAGGAATGTGACGAGATCGGCCGTCCCCATTTCTTTATCGTC
GGGGACCCAGCGCCCCTGAGCTGTCATGGCGTAAGGATCAGAAATCAAATCCCCCGCTGA
AATCCATGCAAGCAACCCCCATCCTTCTTCGTGGTGGCCCTGAGTATCTTATAGGCCAAG
CTCCTGTCAGCAGCGGCAGCACAGCACGAGCGTTTGCGTACTGTGCAAGTGCAAGCAAGC
GAGCTTCGTGCTTGCAAGCTCAGCTCAGCTCCACTGCCCGCTTCCTCCACTCCACCACCA
CCCGATGGCTCGCGGGCTCGCGGCGCTGCTGGCGCTGCTAGTGTCGGCGTCGGTGTCATT
GCCGGCCGCCGCAGCGCCGGCGGACCAGGAGGGCGACCGGATCCGGGAGCTCCCGGGGCA
GCCGCCCAACGTGGACTTCTCGCACTACTCGGGCTACGTCACGGTCAACCAGGCCCGCGG
CCGCGCGCTCTTCTACTGGCTCGTCGAGGCGGCGCCGGCGGCCGGGCCCGTCGCGCCGCT
CGTCCTCTGGCTCAACGGCGGGCCCGGCTGCTCCTCCGTCGGCTATGGCGCGTCCGAGGA
GGTCGGCCCCTTCCGCATCCGGCCCGACGGGAAGACGCTCTACCTCAACAAGCATTCCTG
GAACAAGGGTGCGTACTCCAGCTCCAGCTCCAGCTCCAGTTATTAGCAGCGCCACATTTA
CGCATGGTGTTGACTGCAGCGGCCAACTTGCTCTTCTTGGAGTCGCCGGCCGGCGTGGGC
TTCTCCTACTCCAACACGACGATGGATCTGTACACGGGGGGAGACGCCAAGACAGGTGAT
TCATGGACATCTTCGTGCGACCTTTCCGGCGGTGACACCGATTCTCCGGAATTTTGATAC
TAACTTGCTGTCCTTTGCATCTCTTTTTTTGTCTTGTCTTGTAGCACTGGACGCCTACGC
CTTTCTCGTGAACTGGCTCGAGAGATTCCCACAGTACAAGTACAGGGAATTCTACATTGC
TGGAGAGAGCTATGCAGGTATTAATACTTCCTAATGCAGGAATATCACCAAAAATTCACA
GGAAGTGGTGAAGAACCCATCTTCCAAATTGGGCCTAATTTTTGAATTTTATCTTCTGGT
TCCTTGTTTGATGTAAGGCTGGTTTTATGGCACTTTCAGGGCATTATGTTCCTCAGCTAG
CCAAGCTCATATATGAAAAGAGCAAGGGCATTCAGAATCCAGCAATTAACCTCAAAGGAT
TCGTGGTAAACATTTGAAATCCATATTTTACTTTCCAATACAAATGCCAGTTTCTGAAAG
CTTATTATCACTGAAAATTAAGGTGGGGAATGCGGTTACGGATGACTACAATGACTATCT
TGGCACATTTGAGTACTGGTGGAGTCATGGCCTCATCTCTGACAGCACTTACCACAACTT
GAAGAAGACATGCTTGTTTGATTCCTCAGAGCACCCTTCCCCTGAATGTGTCAAGAACCT
GAACCTGGCTAGTTCCGAAGAAGGCAACATCGACCCTTATAGCCTGTATACAAAGCCCTG
CAATAGCTCAGCCTCTCTCAAACTTGGCCTCGGAGGACGCTATGTAAGTACTTTGCTTCT
AAATTTCATAGCTTAATATTTTGCAACTTTCTTGCTAGATTCTAGTTCTTACATCAGCCG
AACTAGTTAACCATCAGCAGTGCAATGCCAATAACAAAATGTTGGTTAAACATCGGCCGA
AACGAATTGGTTTACTATCAACACAATAGGTCTTGAATAAGGAGCAAGTGCTCTCTCCGT
CCCAAAATAAGTATCGCTGACTTAGTATTCCCTCCGTCCCAAAATTATTGTCTTAGATTT
GTCTAAATATAAATGTATCTAGTCACATTTTACTATTTAGATACATTCGTTTTTAGATAA
ACCTAGGACAAGAATTTTGGGACGGAGGGAGTACAACTTTAGTGACAGCCATGCTTAATT
TGGGACGGAGGGAGTACAACTTTAGTGACAGCCACGCTTAATTTGGGACGGAGGGATTAG
TTCATAAATGGGAACAAAATTTCATAAAATCATTGATACAATGGAGTAATGGGTGCAATT
AATTAATTTTCTGTTAAGGAAATTTATATTTGATGTTACTTTAAATCAGGAGATTTTACG
TTTTTAGAAGGTTCTGTTTTATGTATTCTTGAGTGCAGCCTCGTGCAACCGTGGCATTTT
ACACTGCCTGAATTTTTATAGCTTGTATCAAATACTTCAGATCAGATAGACATGAATGTC
AACATGAAACACAATGTTTTATGCAATTTGCTACAGTAATTTGCATCTAACTATTTGTCC
GATTTCTGTTTTTTATTTATCCACCTAGGATTGTTATTTTTCATTTGGTTGAATAGCTGT
ATGTTATGAAACTAGATATTCTTTGATTATATTGTTCGTCTATATATTTAAGCTGGTGAT
ACTTTTTACAGCCTTGGTTGTCCAGAGCTTATGATCCTTGCACCGAAAGATATTCAAATA
TATACTACAATCTGCCAGAAGTACAGACGGCGTTGCACGCTAACACAACTGGAATTAAAT
ACCCTTGGAAAACTTGCAGGTTCGAATCCCTTTAGCTGAAAAATACACCTTAAAATTCTG
TTCCTTTCTTAAGCATGTATATACTCACTTGCCTATTAATTGCAGTGATATTGTCGGATC
GTATTGGGCGGATTCCCCCAGATCTATGCTTCCAATCTACCATGAGCTAATTGCAGCTGG
TATCAGGATATGGGTATTCAGGTACGTGCCAGAAGGCCCAGCACTTGCTTGTTTCAGATT
TCCTATATTCCGCATGACCGAGTATATCTGTTTTTTTCAGTTTAACATGTAGTCCGACTT
GTTTGTGAGTTAGGGAATTATTTTTGTGTGTTCTGCATGGTTAACTGCAGCATCTAACTA
CCACTTTATATTAATATCGGCCTGTATAAATATAGATCTTCTCCAAACATTTTGAGTATT
GCCCCTTAAGGGAATGAACACAGATATCACATTCTGAAATGATTTCTGGCTGCTGCTATT
TGTACTATCTTGACCTCATGGATAATGAGTGGCCATGCATTTTATTTTTTGACAGTGGGG
ATACAGATGCTGTGGTTCCTATAACTGCAACAAGATATTCCATAAGCGCTCTCAAGCTAC
CAACGCTGATGAATTGGTACCCTTGGTATGACCACGGGAAGGTAGGTTCACTGAAATGGT
TATTCACTAAATTGAGAATTCTGTCCCAAAAAGACCAGTCTCGATCTGACATCAAATACT
TCTCTGTTTTGCAGGTTGGAGGTTGGAGTCAGGTTTACAAAGGACTAACCCTCGTCACCG
TAGCAGGTGCAGGGCATGAGGTACCTCTGCACCGGCCTCGACAAGCATTAATACTATTCA
GACACTTCTTGAAGGACACACCAATGCCCACTCAATAGCGACTTGAAGCAAATGATAGTG
TAAACTATGAAAATCAT