| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_53740
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_67838 |
1 |
2594 bp |
MLOC_67838.1 |
Available |
Available |
LOC_Os01g69990.1, FRAME:-1, EVALUE:0.0, 13101.m07595 protein GYF domain containing protein, putative, expressed |
| MLOC_67837 |
2 |
2199 bp |
MLOC_67837.1 |
Available |
Available |
LOC_Os01g69990.1, FRAME:-1, EVALUE:0.0, 13101.m07595 protein GYF domain containing protein, putative, expressed |
CDS Structure of MLOC_67838
CDS Structure of MLOC_67837
Contig Sequence (8873 bp)
>contig_53740 8873 assembly3_WGSMorex_rbca.fasta
TGGTCAACCCCGCCACGATCCGGGTCGTCCTCAGCCTTGCCACCGGCAGCTCGTGGCCCA
TTCACCAACTTGACGTCAAGAACGTGTTTCTTCACGGCCATCTCGCCGAGACGGTGTACA
GCACGCAGCCCTCCGGCTTCGTCGACTCCACGCGACCTGGGGACGTGTGTCGTCTTCATC
GGTCGCTCTACGGGTTGAAGCAGGCACCCCGCACCTGGTTCCGGCGGTTTACCACCTTCT
TGGAGTCCCTTGGATTCCTCACCTCCAAGGCGGACTCCTCGCTCTTCTCCATCCACCGCG
GCTCCGACACTGCCTATCTTCTCTACGTCGATGACATTATTCTCACCGCCAGCACATCCG
CCTTCCTTCGCTCGATCATCGCCTCCCTACACCGAGAGTTTGCCATGACCGACTTGGGGC
CTCTACACCACTTCTTGGGCATCAACGTTCATCATACCACCTCCGGTCTCCACCTCTCTC
AAGAGCAATATGCACTCGAGATTCTTGACCGTGCAGGCATGCTTAACTGCAAACATGTGT
CTACACCCATCGACACCACTGCCAAGCTCTCCGCCACCGATGGTCCTGCCTTTCACGACC
CATCTCTTTACCGGAGCTTGGTCGGGGCCCTCCAGTACCTCACCCTCACCAGACCCGACA
TCTCCTATGTCGTGCAACAATGCTGCCTCTTCACGCATGACCCTCGCGACAGTCACTACC
AGCTGGTGAAGCGCGTCCTCCGCTACATTCGTGGCACCGCTCACCTGGGTCTCCACTTTC
ATCGCTCCACCTCCGGCGACCTCACGACGTACTCGGATGCCGACTGGGCCGGCTGCCCCG
ACAAGCGCAAGTCCACCTCGAGCTTCGTCGTCTTCCTTGGCGCCAACCTCGTCAGCTCGT
CTTCGAAGCGCCAGAACACCGTGTCTCGGTCCAGTGCCGAGGCCAAATACAGAGGGCTCG
CCAATGCCGTCGTTGAGTCGAGTTGGCTTCGCCAACTCCTCGGCGAACTTCGTCGCCCAC
CACCGCACGCCACCATAGTCTACTGCAACAACGTCAGCGCCATGTACATGTCCGGCAACC
CCGTCCAGCATCAACGCACCAAGCATATCAAGATTGACCTTCACTTCGTCCGCGAGCGCG
TCTCCCTGGGCGAGGTGCACGTCATACACGTCCCGACGACATCCCAATTCACGGACATCT
TCACCAAAGAATTGCCAACTTATGTGTTCAACGACTTCCGGACCAGTCTAAACGTTGGTG
AGCACCGCGTTTTGACTGCGCGGGGTGTTGGAAGACCGTTTCACCTCAGCCTACTGGCCT
AACGTCAGCGCCAAGGCAGCGCCTTCCTATACGCTCGGGAGAGATCGCGCCTTCTCCTGC
ATGCGCGCCCACGACGTGTTCCACGTCCTGATCCTCTCCCTCTCTCTCGTTTCTGTTGTA
ACCAACCTTATCCATGTACGTATATATTGCACTCTGTGCCGCGCTATACAAAAGGGTTAT
GCGATTGAATTATTTTACCAATGATTCAGTTTGTGAATTTCTTGCGTCTTGAGATCATTT
CTGTCCATTTTGCATGGGTTGGGTCAGATAGATGAATAGATCCAATCTGGCTCGCATTTT
TCTGTCGCCGCAGCAACATGACCCTGCTGCTGCTGCCAGTCTCTCTCTTCATCGGTTCAG
ATCCGCGCACCTGAGACGGGGTGGGCGGGTAGGATAGAGGTAGACTATGCCGTTTCTGCG
GTTCAGTGGAGCGAGTCGCTAGTTTTCAAATGTTGGGCCATGTGGGAACAGCGCGATACC
AGTTCTGTCCCGGCTTGCACGCATGTGCTCCACCTGCATACATGACACGACTCCATGCTG
AGCACATGCGTCCAAATCACCTGGGGAAAACGATGGATGCCATGATGGGGTTTGTGGAAA
GCATGACGGTCTAGCATTTCAGGGCCTCTTTTATTTTCACGGATAAGTAGAAGAAGAAAT
AGAACAGTAAGGTTACTTTCTTGGATGACATTAGTCATTCATTTGATTCAAAACATTCCT
ATGCAGTCAACAAAAGTCCCTTTTAACATTCCTATGCACAAACAAGGCAAATGCCATCAC
TGGAATAGTAACAACCACCTAATAGGACTGTTTGTTTAGGATTCCATGCCTGCCTTCATA
ATGCTCAGTTTTACTACATAATAAGCAATCTAATTTAATTATTGGGTTTAGATTTTGACA
TCGTTCAAATCAGCCCTACAGCACATGCTAACTAAGACAAATAATGCCGGGCTTCTCAAA
GATTGTAACCGACAAATCATCGCAAGGACGCTATGCTTGCTCAATCAGAGGGAGGGGAAA
GAAATGGAAGAGGAATTAAGATGATACTTCCTTGCACTGTACAAGGAGATCACTGACATA
CATGCCCATGATTCCGGTGTCCTGTACAGATTTCATGTATCCTGTATAAACTCGAGGGCG
CAGGTAAACACACCAAAAAAAGCCCTCCCTAATTTCAACTTGAGATTCTGGCTGATCTGG
AGTATCCTAAGGCTAATGGGAAAGAACAAAGGGGGGCCAGGCCATGGCCTCCACAGCAAG
GAATGTTATCAAAAAACATGTGCAGAGTCTACAGAGGTGAGCATGTACACAAAATGGCAG
GACCCAAGCGCGTTAGTCATCGGGGCGGTGGATCTCGCCCATCAAGATGCGGTTGCTGTG
GACCTTGAAGCCCAGAAGCGAAGGGTCGATCTGTTTTCCTTTCTTTGCTTTCTTCTTGGT
GCCCTTTCCACCAGGGCCGCCGTCAGCGGATTCTGAGGCGTCATACTGCAGGGGAGGCTT
CTTTGTGCTCTTGAGCATTTCACTGAACGAAGGACCAGAGGCGTCCTGATTGCTGCTTGG
TGGGATGCCAAACGTCCCTGCCTCTTTGTTGGCTGAAGCAGCAGCTTCCACGCCATGGGC
TGCTGACGTGACTCCTGATTCCATCTTATGCTCTGCACAACAAGATTACTATATCAGAGG
TCTGAAACCATAAAATGGTATAAATCCCATAACATATCATAGAACAGTAAGGAGAACGTT
TGAAGCTAAATATAAATGGAAGGTCAGGTGGCTCAAACAGACCAAACTGCTCAACTACAG
CAAGTAAGAACTGGCCTATATCTTTCCTTTTTACTATCCATCAAAAGCGAAGTGGTCTTC
AGTTGATACGATTAGCTATGTATATACTCCCTCCGTTCGGAAATAACTGACATGGTTTTT
TCTAGCTAAAACCACGACAGTTATTTCTGAACAGAGGAAATATATTATTGGACTTAACAT
TAACATGACTGCCCAGATAAAGAGCTTCACTGAATAAACAACATAGATTCCACAGGAGAA
GAAAACCACACAGGTAGGTTGCACATGGCGTACCATCGGAGGATGCAGAAGAAGCATGGC
CTGCTTTCTTGGACCTAATGGTTGACGACAGATCTGTTGACGCTGCCTGAGCCTGAGAGG
TAGCTGTGTGCGGGTTTGCTGTGCGCTTTAGCAGGGAATGGGAGCTTCCCTTTGAGATGC
CAGTATCAACCCTGCATATTGAAAAAAAATAACTGTATTGAGCCTTATACTAGAATCAAC
TGTGTGTTCACATGCACCACTATGTGTAAACTGACAATAACAATTTGGACAAGTAAAATT
ACCGAACGTCTCTGGAAAAGTGAGGATAAACAAAGAACAGGGCATGTCTATAAGCAATGG
AGAGCCTAGATATCAGGACTTGTATGACTGTGCAAATAAAGTATTATACTGTATATTTGT
AGAAACAAAATATATATCTGTAGTGAAAGTTCATTGTGAGGCTTCAAAAAAGGATAATGA
AAATAGGGGTGCAGATGAAAAGTTAAGAAAAGTACCAGTTGCTGACCGCTTCAGAAAAAT
CAGTGTCCTCCACTGCCAAGTTTGCACTAGAACCCTGCCTTTTCCTCCGGGCTACATCAT
TGGCATTCCCAACCAATTGATTAGTTGACACACTACCACCCATCACGTCTGGGAATTCTC
CCCTTTGCATATCAAGCATTGTCGCAGAGCTTGATCTGACACCGAGTTTCCGGTTCATCT
CAATATTGTTTGGTAAAATATCTAGACTAGTTGGTCCATCCTGTCCTAAGTGCCCCATTT
TTGAGAAGTGTGACCTTTCTGCAAGTGGATCATCAAAAGACAACCTGTCAACAGATGATC
TTAAAGGGTTATCTGCAGCGGGCTGTGCAAAAAGTGAAGAAGGGTCTTTACGTCCAAATG
ATGCCGTCGGCGGAACATCAGGGAAACCACGAGATTGCTGTGCTTGAAGAACCAGTTTTT
GATGAATCATATCACTCAATTCAGCTTCTGGGTTCCTCTCATTGTTCATAAGGGAGGCCC
ATGCATGTGGGTTGTCAATGGGAAGATTCATTTCCACATTCCTCCTCTGCTTCTCTGCTT
CAATTTGCATCTGATTTATGCGTGAAGCTTCCATCAGGCTATTTTGCAATTGCCCATTGG
CATCTGACCAGTTCCTTTCCAGCCTTCCCATGTGAGAACCTGACAGCTGCTCCTGCAGCC
TGTGTTGCTGGGGATGAACCCCTCCTGAGGCATGCATAGGCATCTGGCCTGCAGAATACA
GATCACCATGTGTTTCCATCTGACCGAGGCCATGATGACGTGCTAGGGCATTTACAACAT
CAGGATTTGGTAAAGGAGCACCACCAGGCAAAGAGCCAGACCGCTCAAGAGAATGAATAC
CTTGACCTCCTCTGTGCAATCGTTCATGCATAGATAGGCTTCGGTCAAGATGGTCATGGT
GCTCCACAGATGACGACCTCTGAAGGGACTGCAGAAGATCGAATTGACCAAGTCTGGAGG
TGTGGCTTTGATTTGGACTAGTTCCTGTGCGGATAAATTGGCTAGGATCATCCATCGGCC
AGCCCCCACCTAAATGTCGTTCTTCCTCCCTGCCCGCATGTTGTCGTATAGCATTGGCCA
ATTGTTGTGTTTGGAGCTGATCATGGTGCAGCCCTAAAAGAATTTGCTGCTCCAAAGGAA
GAGCCTGCCTCTGGTTTGAACGTGAGAGAACATCTAACATATCATTGTGTTGCTCCCTGT
GATGGCCATGCCCAAATTTTGCTTGAATGAGTTGTTCAATAGCTGCATCATGCTGCCTTT
GAAAATGATGGGGTTGATGATGCAAGTCATTCAATAACTGTTCCCTGAGTAACACTTGAT
CGACCATGTTAGCTTGTCCGAAATTTGAACTCTGTAACTGTTGCTGCAACATTTGCTCAA
TAATCAGCTGCTGCTGTTGCTGCTGCTGCTGCTGTTGCAGTAGCTGTGCTTGGCGCTGCT
GCAGCTGCCTCTGGTGTTGCTCTTGCTGAAGCTGCCTCTGGTGCTGCTCTTGCTGAAGCT
GCTGGCGGTGTTGCTCCTGCTGCAGCTGTTGGCGTCGCTGCTGGTGCTCAAGTTCAAACT
GGACTCTCAAAAGGTGCTCCACCTCAGGAGCAGGTGGATTGATGGACTGTCTGTGTTGGT
GCAATGAATCAAACACCTGCCCTGCAAATTGTCCAGGAAATTCCAGATTGTTACGACCCA
TCATTTGTTCCTGCTGCAATTGCTCCCTTCGAATCTGTGTAAGTAGCATTTGCTCCTCAT
AGTTCAGATGACCTAGCTCAGGTTCAACCTGGGAAATTAGCCCTGACATGTTTGCATCAT
TAATGCTGTCCAGCCGCCCAAGGTTTGCGGACCACTCATCACGCACAGCAGGGGCTTCAT
TCATCCGGCTAAGCGGCCCATGCCTGATATTTGCAGGTGGAATGTCCTTTGGAGCTGTCT
GTTTGGGATTTCTCCGCTCATTTACACCAAGCACATTTGATGAGAGTGGCTGCTTTGGAT
GCATCCCTTCCAGCTCAGACCAAAGCAAACCAAGAGGGCTGAGTTCATTCTCTCTAGGGG
CGTCCTGCTTGGGCAAATTAGCTTCTCTCACCCCAGAACGGGAATCCACCGATGCCAACT
GGAAATCTGCACGGTCATTATCAAAATCTGGTCGAGATTGACCCATGCCGCTGGTAGGCC
TCCCAGTGTACAACACTTCTGTAGCAAGTACAGAAAAGAAATGTGAGCATTCACACATAA
ATAGAGAAAGACAATGTGAACAAAAATACTATATAACTGAAAAGGAAGGAAACTAACCTT
CAGCATCATGACTCACAGTTTCAGGAATGCGCTGCTGACGAATATCTGGGTTTGCTTCAG
TCTTTTGTGCTTCAACTGAGGGGAACCAACTAGTATGTGACTGTAACGGTGCTTCCTGGT
CACCTCTTGTAGGATTGGCTGCATAATTTCCAGAGTCCGCCTTAGTTGTCTGATCACTCT
TCCCAAAAGAACCAGAAGTAGGAAGTGCGTCTTCAAAATTGTTATGTACAGAATCCGGAG
ATTCAGCACTTCCACCACGGGATACAGGTGGGAGAGATTGAGGCTTATGTCCAAGGTACG
GCATGAGGTCAGAAAGTGGGCGAAAAGGAGCATCATCTGGAGCCTGAGCTAGACGCACAG
GTAGCTCCAATCCAAAATATCCATCCTCATACCAGGAAACTATATCAGTACCCATAAATG
GACCCTGCACACCTCCTTGGGGATCCAGATAGTATAGGGTCAACTCCTCTGGGTAACTCT
CCTGGCCACCAGCTTTTGTTTCAGTGTAACTAGCCTGACCAGTAGGATATTCAACATTTA
CATTGAACTGTGCATTTGAATCATCAGGTAACTTGGTGCTAGGATCGATATCAGCACTTG
ACTTGACCTCATTAAACTGTGTGTCATCCCTCATGCCAGAAAGTCCATGCGGATGACTGG
GAGCATTTTCGTCGGCAGGCTTCTTTGGTGGGCCTGTAATACCACCTGTGAGCATCCCGT
CATTGTAAAATGCATCCTTCTCTGATATTAAAGCAGCAGATCCTTCTTGACTTAACCCGC
TAAATGCTTCAGCGCTTTTATCCTTGTTGGCATCAATACCAAAAGCTGGATTGAAATAAT
AATTGTAATATCAGATGATACTCAAAAGGAACAGAAGAATCATATGGCAGACGGTAATAT
ATGCATCCCATGATGATGTGCGTACCTTCAAGATCTTTGTTTCTCTCCTTTTGGGATGCA
GTTGAATTCGTCGCTTCACTGCTGGTGACCCTGCCCTTCCTAATATCTTCCAAAACAGCC
TGTATAGAACACAAACGGATAAATAAACTAGGTAGTAGTGATATAGAAGTTAACTGGTGA
ACAGACACTTTATAAGAAACCATGAAGGAGGTGGCTGAAGTGTTACCTCTTCATTGTTGT
CAGGGGTGACAAAGGCTAGTGGCTTAACAGAACTAGAGAGTGTTATGGGAGGAACTTCTT
CCAGCATTCGTCGGCCATCTTCGAATGACTGCACGACCTTTTGTTGCCTGTATATGTCAA
GAAGTTTACCCCTTGGGTAGCGAAAAGCACCAGCACTTGCCGCACGCCTCCCATACACAG
GTGGAGCACCAATTGGTCCAGCAGATGATGGACGGCTGAAGGATGGAACTGAGTTGGGGT
TTGCCCGGCCTCTTCCAGGGGCAAAACCAACATTGGATTCCTTCACACGTCCTTTCTCCA
ATCCGAATCCTGGAGCAACACGGTATGTTGCTGTACCACCAGTCTGAGGCTCCTGCCGGT
GACGAGGTCTCCATTTATCACGGGAGTCTGACTCAGGCAGCAGCCTTACAGGAAGTGTAT
GTTTCTCACCATGAGGTTCATCCTTTTCTGCATCCATCTTCTTTTCTGGTTTGGAGTCCT
TCTCCTTGTCGTCGGGTCCCCATCTTAATGACCATTTTCCATCACGCCTACCTTCATTCC
CTGAATTTCTGGTGGAGCCATCATCCCACCTTCCAGATGTAGGAGCTGGCCGTGAATCGT
TGTTGTCCCTTGCAGAAACATTGTCAGATCGGCGATCATTTTTACGGTTCTCCACCTCCC
GGTCCACTTCCTTCTTGTGATCCCTCCTCCCAAGTAAGCTCGTCTCCCTCTCCTCATCAA
GCCAACCAGCATCAAATGCATTCCGACGGCGCTCTTTCTTAGCCCCAGAGCCTTCGAGCA
TCCTCACATCTTTCTCAGAAGGTTCAAGCAAGGACCCATGAGGCGCTGAAATCTGCAAAC
AGGTGTTCTGCAGTTAATACATGCTTGTACCAGCACCCAGTAAACACCCTGGGTAAATAA
TACTGACTAAAAACTCCTTACTACACCCACACATCTGAATGGATACAGAAATAGGAAACC
AGTGACAAACCTTGGCATCGCTTGGTTTGGCATAAAGCCACTGAGGGGACAGAGGAATGC
TGTTCTCCAGGTGCTGCTGATCTGCAAGAGCAATAGATTTTCAGGGTCAACGACTCAGTA
AGACCATGCTATTATATCCATCAAACACGTACACAATAGCTCACACACGCACTCAGACTG
CCACCCCAAAGGCAGGCAAGCAAGCACACAGTCGCTCGCACGCACGCACGAACACACAGG
TCCACACGTGCAGACACGCAAGCACGCTACCAGCGACCATTCCATTTCCCACGAACCAAA
TCCAATATACAGTAGAGCAAAAAACAACCTGCGTACCATGGTAACCCCCCGACAGCTAAT
ACCGAAGCAGAAGAATAAAAAAAAACAGAGCCGAAGCAACACTGATGCGGTTCCGGGAGA
AGCGACGGTACGGACCTTTGGGATCGTCGACGAAACCCATGGCGGCGGCGGTGGACCTAT
CCTCGTCGATCCCGAGCGAGAGGGCATCTGCGAGACAAGCACGACATCAAATCGGGGGCG
CGAAGAAGGCAACCACACAGATCTACCTATACGCTGGCAAGGCCAACCGACGG
