Contig Data
morexGenes
Links



Map Locations of contig_53504 (6827 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_53504

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67716 2 1590 bp MLOC_67716.1 Available Available None
MLOC_67717 1 800 bp None Available Available None





CDS Structure of MLOC_67716






CDS Structure of MLOC_67717






Contig Sequence (6827 bp)

>contig_53504 6827 assembly3_WGSMorex_rbca.fasta
TTTACTCAGCAAGGACAAGAGGGCACAAGGATATGGGAAAAGCACTGAGAGGTTGGGGAT
AGACTGGGTTCACCTGGTCATTTGCCAAATTCCAGAGGAGAAATCCAGGAGAGAAAAGAT
AGGAAGGAATAACAGCACAAAAATTGATAACCCGATTTTTGGGGTGTTACAGACTGGTGC
GATGATGGCACAACAACGTGCTCCGAACGGCCATTGTGTCCTTCGACAGCGACGGTGATG
CTGCGACGGCATGCGCCGACCGCCGTTGTGATGTTGTGATGTCAGCTTGACTGATTCGAT
GATGCAATGGCATGCTTCAACATGCGCGACGGTATCATGACGGTGTTCTTCAAAATGGTT
GCGGCAATGCTGCGATGTCAGCTTGGCTACTTTGATGTTGCTGCCATGACATGCTTCAAC
AGGCGCGATGATGCCACGACAGTGTTCTTTAAACAACCACCGTGTGCTTTGATGACATGT
GTCAACAACAACGACGATGCGAGGACAGCAAATTGACTGTTCGATGATGTTGCGATGGTG
TGCTTCAATAGCGACAGCGGGTGCTTAGAAGGTCGTGGTGCCATGCTTCGAACAAACACA
ACAATGTTGTGACGACGTGCTCCGACCAACCCCGGCGATGCTGCAACGGAGGCCCCGACT
ACTTCGACGATGCTGCAAAAGCATGCTTCCCGGCCAAGACAGTATTGCGATGATGGCACC
ACTGCTTCGACGATGCTACAAGAACGGTCTGGCTGCTCCCATGATCATGCAAAGGCATGC
TTACCGGCCATGGAAGTGTTGCGATGATGGCACGACTGCTTTGACGATGCTACAAGAACG
GTCTGACTGCTCCCATGATGTTGCAATGACATGCTTGGACGGCGCCCGCGGTGGCATGCT
TCGAACGATCACGATGACGTTGTGATGACGTGCTCGGACCACTGCAATGATCCTGCGATG
GAGGCCCGACTGCTTCGACAATGCTGCAAAGGCATGCTTACCATCCATGGCAGTGATGTG
ATGATGGAAGGATTGCTTTGACGATGCTACAACAAAGGTCTAGTTGTTCCCATGCTGCTG
CAAAGGCATGCTTACTGGTCATGGCAGTGTTGCGATGATGGCACGACTGCTTTGACGATG
CTACAACAACGGTTTGGCTGCTCCCATGATGCTGCAATGGCATGCTTGGACAGTCGCGGC
GGCATGCTCCGAACGATCACGACGATGTTGCGACGACGTGCTTCGAAGAAGATCATGACG
ATGTTGCGATGAAGGCCCGACTACTTCACGATGCTGCAGAGGCGTGATAACCGGCCATGA
CAGTGTCGCGATGATGGCACGACTGCTTCAACCATGCTACAACAACGATGATTTGGTTGC
TCCGATGATGTTGCAACGGCATGCTTAGACGTCCGCAACAGCGGGGAAGGCGTTAATGAT
GCTACTCAAAGCATGCGTTGCTAGCGAGAGTGTTTTGCATGACAGCGGCCACACCCAACT
GCCTCTAGGCAAAAAAAATGATCAATGCCAATCCTTGTACCAAAGCTAGATTTCTTGGAA
TGGTTGATGCATGCAGTAGACATGAAAGAATGAGAGAGAGTGAATAGCACACTAGTATGA
GTAGCGGTATAGGCACGAGGTAGCTACATAGGCCATGCATGTGCACGAGAACAACAGCAG
CAGCATTAGGTGAACACCGTTATCATGGAAGGAAGATCGTGGAATCAGGCAGGACCACAA
ACACGTGGCGGCTGCAGGAGGGGGCTTACGCCCGAGCTAAAATCAGTCGGATGATTACAA
ATGTGTTCCTTGAATAATACACAATCAACAAGGCCAATGATAGGCGGCGGCACACTGGCT
AAAAACTCGGTTGATCAACGCGCGAGCGTCCAATCTGACCCTCCGTAAACGCATGAGATT
GAACAGAAGTTGAGTCATCCTTTTCCTCCAATCCCACACGATCCAGGCTCCCGCGTCCTG
CTCCTTCTCGTAGCGCCACCGCGCGACATGTCCAGACGCCATCGCACACCCCTCAGCCTC
CCGCTCAATCTCAGCAACATCTCACGCATGAGCACCTCCATCCCCAATAGCCGCTTAAGA
GTGTGCACCTGATCCCGGCAGTAGCTCGTCTTTGTCGTGCTCCATGCGGGGGCCATTATA
GCTCCCTCCCGCAACTTGTGGTTGCTGCACAGGGCACGCAATCATAGCTCCACCACCGTC
GCTGTTGCAACTCGGCACCATCGCAGCTCGCCACTGTCGCCTGGCGCTGGTCCTGGCAAA
TCAACTCTGGTCGTCGATTGAAGCTTTTCACATATACGACTAAACCTTTCTTTGTCCACG
ATTGCAACTTTTCTGGTTGCACAGTCTCTGTTGAGGCTTTCTCTCGCGCCGATTGGAGCC
TGTTTCATCTACGGTCGAAGCTTTTTTGTCAATGGTTACACCTTTTTCGTCTGAGAAGCT
CACGTAGTTAAGGCTTTCTCTATCGTCTGGTTGAAGTTTTTTTTATCTAAGGTTGGAGCG
TTATGTGTCAACTGTTGTAGCTTCCCCCCGATTGGCGGTGTTGGCTGAAGATTTCTCTAT
AGTCGGTTGATGCTCGTTGTAACAAACAAAATGCCGTTATGCAATGTAGCAAATGTGACG
CCGGTTGCAGTCGGATGGGACGTCGGTTGTAGCAATTTGTGACGCGGGTTGTAGCATGTA
CCAAAATACAACGACGTTGTGAGTTTCTCGGAGCAGGGCCGACGTCCTCATAGCCCGTGG
TCGTCGCGCTCGCCATCCATGATCGCTGCTCTCCGGGGCACCGGTTACAGCTCCCATCGG
CAGTAACCATGGCGTGTGATGCATGGATGGAGGAGAAAAGGGAGAGAGGAAGAAAGGGAA
ATGCATGAGAGCAAGAAGGAAACGAGTGTATGGAGCGACATACATGACGAGATAAGGAAT
AAGGAGTGGGAAAGCGACGTGTGGTACCCGGAACATGTGAGGAGGAGCTTCGCGAGTGGT
GTGCGACGGGCCCAATGTTTGGTCGACGCGCCGACGTAAAACGTTTCCCAATCAACAAAC
ACATCTACAACCTTTTACCCTACTTTTAGATCTTGCATTGTTCTTGCTCTCTCATTCTTT
GTTCATTCTTCATATTGCAGAGCAACTATCCACGAGACTCTAGGGGCTGTTGGATCGACC
TAGAGCAGCCCATAGCCACGTGCAAATGGACGGGCTCCCTCCTAGGCATGTGGTGTTTCG
GTTCTACAAAAGCGACTATCAGATTGCTTACGTACCGCGCTTCGGAACGAGTCTACTTCA
ACATGTGATGCAGTGCACCATCGCCCCCCACATCAAGGATACACGGTGGCGTGTTCGTGT
GCAAACCTAAAATGTAAGAGATCGTGTTGTCTCTTCTTTGTAGCCACTCTGTTCCACCAC
TCACACACCTTCCGAACAAAATAGCTAGCACTCCATAGCACTCTCGGTATCAAACATCGA
CACTAGGTTCATCAAGGGAAGCCAACTATACAATGAGATATTCCAAATTTTCCTCCGCAC
TATTATCTTTTTTTGCGAAACTTTTATCATCTAAACTATCACTAACAGACATATTCCCCT
GCACAATAAACAAATGACATATTCAAGGAAAAGAAAAGTCAAGAGGTATATACAAAATTG
CATTTCACCAAGAAACACGAAACGGATAAAAATTAAATTCTTCTTATAATAACTGGTAAA
TTGTACTCCAGCAGAGCAAAGGAACATGACATTGGTCTGGTGACCATTTATTTTAAGTAA
AACTCCAGCAGAGCAAAGGGACATCTAAAATTCATTTTTCATGTTGGAAGATGTTCGTCG
TCGATCGACACCTTAGCAAAGGATCCGTCTCCTTAGCTAGTTCCAACCGTCCGGCGGCGC
CCGGCTGCCACCACCTCGTCCCCCACGGCCACGAGAAGCTGGAACAGAACGAAGGCAGAA
AAATGTTGAGTTCAGCATGGATCGCACCTGCATTTGAGCAAAGGACAGACATGACGGATG
AAGTAGTGGTGTGGTTAATTACCTGCAAGGATGTCAGCGCGGGCTCTTGTCGCGTCCCCC
TGAATCCTAACCATCCTATTTCGGCGCCACAATATGGCCTCATTTCTCGTCGCCGCCGCC
GCCGCCGCCGCTCGGTTGTCGTCGCCTGATGACTCCATCATTTGCGCTGTGCAAGCCCCG
AGGCCCGTAGACTGCCACTGCCTGCGCGACACGTATCCGGGGCCTGCAAGAAGCGTACGC
GTATGGAGACCTACGTAGAAGAAGCCAATCGGCTCCGTACGAGGCGCGAACCCGGTGCCT
GCAAGAAGCGTGCGCCTGTGGAGGCCATCAACGTCGTCGTCGAAGCGCATCATCTCCTCG
CGCAGCGCGGCCCTGATCCTTGCAAGAAGGGACTGCCCGTGTGGGAGACGAGCGTCGCCA
AAGCCCATCGCGCGTTGCGCGGATCCTGCAGTGCCTACAAGAAGCGGGCGCTCATGGAGG
AGACCGCCATCGAAGCCCCGTTGCACAGATCCGGTGCCTGCGAGCTGTGCGAGGAAGGCC
CCCCCGACACGACGGGTCGGCGGCTCTCTCCGTTGCATGATTCCGGTGGCCGCTTCTCGC
GCAAGCGCGTCGCGGCGACCGGAGCTAAGCAGGAAGACGCTCTGTGCTCGGGTTGATTGT
GACGACGAAGCGTTGAGAACCCCGGAAGCCGTCGGGGCCGGACCACCGGGGAACTGCGCA
GGCACCGCCTGCCGCGGCGGCGCGAGAAACTGCGGGTAGAAGCGGTTGCCCCTGTCCGGT
GCCACGGAGCGTGGCTGCGGCGACTGGAAGGTGAAATGGTCGGTGCTCCGAGCTTGCACA
AGCGACGGCGGCAAAACACCATTCCTTGGAGTAGCATGGTGGCACTGGCACCTCTGTCGT
TGTACTTGCGCCGCGTGCGGTGGCGTGGGGAGGAGCAGTCCATGACCCATGCCAATGTTG
CTCCGCGCGGGCACGGTACGACCGGCGAGGAGATTGCCGAGCTGGGGGCGTCGGGTAGGG
GAAGGGGAGACTCTCCTAGTCGAAAGACCAAAGCGTGGTGCGCCACCTCTGAAAGGCCCG
AGATGCTCATAGGATGCCCTCACAGGGGCCTGCGCTCTGTCCATAGAGGAAGAAGCGGTG
AGGAGGTAGCCAACGGGGTTGCTTTGCTGGGCCTGATTCTCCCTAAGGCCTCCGGTGCTT
GATGGGCCTCCAGGCTGTCCCATGTCCTCGTTGGCGTTGCCCTTTTTTTTCAAGACTACT
GAAAGGAATCGAAAACATAATTAGTTGTATGAACTTTGCACGAACCCTAAATATCACAAG
AACGGCGGGAACACACAAACCCGAAATACCTAGTATCTTTCTCTGGCTCGTTTGCGAGAG
ACGGAAAGCGAGAAAATTCTGAGACTGAGAGTTGTGAGGATTAAATTTGTTCCGATGTGG
GGTGCTCTGGTTGGAAGATACACACCGGTATTTATAGAATCGCCGAGCACGTTATTAAAG
GAACGAAATTAATTCGTACTTATCAAAATAAATCTGCATTTATTCACGCCTAATAATTTA
TCAAAATGGATCCGCATTTATTCACATCTAACTAATGAATGGCCAATAATAATTGATTGC
CTATAATTGCGAATACTGGGAATACTCATTAGTTCTGATATGTGTGTGTGTGTGTGTGTG
NNNNNATATATATATATATATATATTCCAGCACATCCATATTGCATATCTATCTCCAGAT
ATAAATATCTAAATCCCAATGCATTAATGCGATAATCATAAAATACACCGGGCACAGAGA
AAAAAATGGTCTGACAGTAACAATACAGTTAGTGTACAAGAGTAAGGAACGCAGAGCATC
GGCGGAAGGCAAAAAAAAATATGCTCCATTTCCCTGGGTCCCCTGGCAAGTTTGTACTGT
AGAAGCTTCTGCTGCCTGCTTTGGCTTAAACATCAGGGATACTACAACGATGCTACTACA
TACTCCCACCAAGTGCCAACATCTCGTTTTTTCTTTTCTTTTCTGATGAAGATGAAGTTG
GTTTACCAACGACTGTTGGTCATGCCTGCTTGTTTGCTGAGGTAGAAACTTCTGCACTGC
ACATAGGGCATACCTGCACATGGTCAACTACATCTTGTCAAAACTTTAAAATCTGAAAGA
GCTGCACATCTATCTATACTGTCTTGTAAGTTCTGAGTTGGTTGTTGTGGTGGTGAGTTC
ACCCCTACTCCCTCATCCACCCAGGATCCATCAGGTTTGTATAAAAAATGTAATAATAGA
GTCTCCAAACCCACCAGCCCGACCCTCTTTTGGTTTGCGAAAGAAAATCATAATAAAGCA
AATAATGCAATTCGGAGTCTCGGACCCCTCACTTGCTCAATCAAACCAGCAAGTCAACGC
CTCACTTGATCAATACACCGCATTACGCAATTTCTTTTACTGCAACACGACCCATCCAGC
AAATCCGCGAATGAATGTTTTCACAGCCACCCTCCCCAATCCCCGTCCTCCGTCCGCCAC
TCCTCCTAACTTCCAAATTTCAAAATCCAGCCCAGACACATGCCATTCATTAAACTGCTA
TGGTGTTCTTACCCTTTTATAGTTTTTTTTTTTTACATTTTTCTTACCCTTTTATGGTTA
TGGTGTATTACCTTTTTATGATGTCAAATAACAAGTGCATTGGTTGTTGTATACTACTCC
CTCCGTTCCTAANNATAAGTCTTTTTAGAGATTCCAATATGGACTACATACGAAGCAAAA
TGAAAGAATCTACACTTTAAAATATGTCTATACATCCATATGTAGTC