Contig Data
morexGenes
Links



Map Locations of contig_53488 (6723 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_53488

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67698 4 826 bp AK248279.1 Available Available None





CDS Structure of MLOC_67698






Contig Sequence (6723 bp)

>contig_53488 6723 assembly3_WGSMorex_rbca.fasta
TTTGGGACGGAGGGAGTATATGAGAATATATACCATGATAGACCTAATGATATTGCTTCG
GTACTGCAAATGCAGATATATTTTTCTATAAACATTGTCAAACTTTACAAAGTTCGACTT
GAGACTAAACTAATACGCAATGTATTTTGGAACAGAGAGAGTATTTGTCAATTGCTAGCA
CTTCAAAATTTCCAGAATTTCTCCATACAAAAAATATCAAAAATTCTGGACTCATTCCGC
CGGAGATCGCTCTGCCACACCAGCAATCAGGTTTCTAGCTAGCAAATTATATTTCGAGCA
CAAACTATTCAGGTATCATATTTACATTTTCTCGCAGAATACACATGTGATTGCAATGAT
TTGTGGGCTTATATCAACCAGATTTTGTATTGCCAGATCTTTTAGCACAGTCCCCAGGTT
TCGGTGCATTTGGTCGCTAAATCGGAGAACTTGGTAATTGCTTTACATAAAACCCAGTAA
CTGTATCAAACGATCTGGCAGTTGTGTCAACTTAACTGGCGTAGTTGCTTTTTTGAAAAG
AAAAAACTGGTAATAAGGTAAAGAGACATGCTGAACTCTGTACGCTACTAGTACTGGAGC
ATGCTAGCACTTGAGCATGCTAGTACTAGAGCATCATTTGCCAGGCATGCATTGCTGGAA
TTCAATGCGCTGGTAGACTGCTAGTCAGGAGCATCCATTGGCCAGACATGCATGCGCTGC
CATCACCCAGCTCAGCACAGAAACCACACACGCTTCCTTTCTCGTGCTTGGATCCTGGCT
TGCATGCGCACTTACTCGCTACCGGGCTACCGAGTGCGGTACAAAGAGATTAGGTGGGCA
CACTGTGTAGTCGCACCCCTAATATTTATCAAACTTATGTGGCCCGTAACAAGTCTCTTG
CATTGCAAACTTAAGTTAATCAGATCACAACAGTATAATCACCTGATTACATGCTAAATT
CTTCTGTGTATTCATCAGAACCTACATTTCTCTTGCTATATTATGGGACTTCATGTCATA
GAGAAAGAGCAAGAATATTAACCAGTGAGTTATCACAATTTTCATACAAATAATGCAAGT
AGGAAATAAGGAAAAAAAATTATATCGGTATATTTACTTCAGCAGAAGTGCCTTACCCAG
AAGTATTATTTTAGTTTGTTAGGGTAAAACTGGACCACATTGTTTGGGACTAAAGGCCTT
GTTGTTGTTGTTGTTGTTGTTGTTCTATAGGGTAAAACTTGGTCCAGTTGAACAAGGGAA
TTGGTGAATTGTTGCAATAAACACCAAAACTAATCTATCTGGATAAAAGCAAGTAGTATT
TGACAGTACTTGCTTAATACCTGTTGTTTAGCCTGCTCAAATGCTTCGGTCCATTTCTGA
GCTTCACCAGGAGTTGCACATGCAATCTAGTAAAAGACAATAAGAATAGATCTTTAATTG
CCATGTTGGAGAACTGTATGCAAACACATAAGAGCGTAATAAAGATGAATACCTCTCCTT
TCTTCGTTTGATCCAATTTGCTGTACAACTTCAAGACATAAACATCCTAGGTTTTCAAAA
CATATATATATCAGATATTTCTTTAATAAGCAAGAATATATGTCTGTTCATTCACTTGAT
TGTTCATTGAAGCACCAATACAAAATGAGACCATTACGGCATTACCCCGTGGTTGACCTT
TTTGCGACCAACCTCCTCCACCACAAGAGTGGGACTGACAAAACCCTTTCGGATAGGTTC
CTACAAGCAGATGTTTATGAGTAAAATAATCCTCCACAAGAATGCCCAAGAAAAACTTGA
GAGATAAAATTCTGCAAATGAAGAACCATTTTGGCATAGTGTCCAAACATAAGTCCACCC
ATTTGTCTGGCTCCTTTGTACGCACGTAACAACAGACATAACTCATATGTTTATTTTTAG
CGGTGGCATTACTAATATGTGGTAGTAGCTTGCGGGAATCAAGGCGCACGCTCTTGATGG
GGCGTTGCATAGGTGGGCCGCAGACCCACTCCCGCATGTTGTGTTGACCATCAAAGTCAA
GGCAAGCACGTTGTTAGGTGGGCCCGTGGATAAGACCAGCCTGGTTTGTGAGAGCCGGGC
AGGTGAACTTTCGAGACGCTGCGCGGGAATTTGTCCCACCCAACAGCGAGCAACGCGGGA
GAATTTTCCCGGCGTGTATAACAACTCGGAACAGCCACTACATGAGAATGCGGTATTCTG
TAGCTGATAAGACACATGCAGGACACACTGACCAAGGTATTGATGTCAAAATCTCCTCGG
TGTACAGATTTAAAACGCACACACAACTCAGCATTTTCTTCTGAATTCCCCCACTTCTGA
CAAGTTTGGTGGCAAAATCTTCAGCAGAAAAATAAGCGCCCGTGCATCATATATTAGAAT
AGCAGCAACTGAACCACAACTGCATGGAATTTATAAACCAGATTAATCTCCAAATGCACA
TTTAAGCATTCCTCGGTAGACAAGACACATATGACACATCCAAATGCATGGACACCACAT
TCCCTTGTACTCCCCCGTTCCTAAATATAAGTATTTTTAGAGATTTCAATAAAGACTATG
TACGGATGTATATAGACGTATTTCAAAGTGTAGATTCACTCATTTTGCTCCGTATGTAAT
CCATATTGAAATCTCTAAAATGACTTGTATTTAGGAACGGAGCGAGTAACAAATTAGGCT
TTCTCAATTCACATGGACGTTTCGATTCTCACCCGTGCAAAGCTCTACCTCTACCTCATG
CCAAATCAAATCAGGAATTGCAACAACAGAGTACAATTCGCACAATTCAGCAGTTCATCA
AAAAACCCACAATTCCAACTAGACAGACCTAACAAACAAGCAGTAAAGCAAGACGTAACT
GAGCGATCCCGGCTTCATCCTCCACAACCCTGACAAAGCTATAACCCGAAATCCCCGAGA
ATCAAAGCGACCATCACGCGCATTAGAACCAAAATCTAGCGGCGAGAGCAGAGCGCGGAG
AGAGACAGGGGGGGAGGGGGAAACTCACGAGTCCCGGGTTGTCGTGCGGGTCGCGCTTGT
ACATGGCGACGCACTTGCCGCGGATGACGAGGAAGCGGAGGTGGCAGTACTCGTGGCCGA
TGGAGTTGACGCCGAGGTGGTAGACCCACCCGGAGTACTCCGACGAGCTCCGGCCGCTGC
CGCTCCCGCTCCCGCTGCTCCGGCTTCCGGCGTCCGGGGAGCCCGGTTCCGAGTTCTCCA
CCTCGATTACCTCGCCGGCCGGCGGAAGCGGCGAGGGCGTCGCCATCTCCGACCGCGTGC
GGTGGCGAAGGGACGAGTGGTATTTTCGGTCGCCCTCTTGGCTTCTCGCGTTATTATTTT
CTGGGGCCGGGCCGTAGACACCTACCTCAGCTCAGATGTTACCGCCCCATCACGGCGAAG
CTGCGCTGGAAAGGTAGCCGTTGGCCTCGAGGTGTCCCGTCACCGTTGCACTTGCCTTTC
TTTTTTGTTTACAGAAAGTCCTCGGATTATGTATGTTTTGAAACAAGGCCCTTGGGTGGG
TGTGCTTGTCGGCTGCGGCCAGCTGTTTGTCACAGCCCCACAGGGCCGACATAAGAGGCA
ATGTGACTGAATTAATCGATAATTATAGGTTAAATTTCTTTGATTGTCTAATACAATAAG
ATTTGTCCGGTCTCAATAACACGATTGCATTCCACGTTCCTCTCTGACGCTTGTAGCGCC
TTTAAGTAGTTTATTATAGATAGATTATAGATTATATAGATAGATATGGACTTGTGTCTT
TAGAACATCTTCAATGACGATATGTAAATCGCTCACACATGTCTGGACTTCGCGATCAAA
CATTGTCTACCGTGGCCCATCAAAACCCGTCATTCCTTGTTGGTGGCAAACGATTGGTCT
GACGATTTCTTTTCATTATGATGAGAAGCGTTTCCCTTTTTGTTCTGTGTTAGTTGTTCG
CATTTATGTTGTTGTATTCATGTCGTTGTAGAACGCGCCACTCTATATTGAAGCCGGCCC
ATATCACACGTAACCTCTTGCTTCGCCGTTAAAGCGGCACACAGGTCGAGGGCATCGCCC
GCGACATATCCCCGGTATTCGCGCATGTTCAATGTCGGAGACGCTTTATTGGACGGGACG
GGACACATATCTACCACGTCTGTTCAATGTCTTGAGTGTCCATATGCCGCCATTAAGTAT
GCTCGCGGCCCAAGAAACTCACTTTGACGTTGCGCATTGACGCATCCAGACGCGTGGCCT
CACCGAAATCCGTTATTTAAAGGCGGCCACACCGGGCTAACTCCATGTCACAACACAAGC
GGGTTCCCCGTCCTACTCCCTTGCACCGCATTCGCCATGACCGCACGCAGCCAAGCTATG
TAGGAGAGCCTTTTTCACGAAGATGAAGTACGAAGTGGTCGCCCTTGCCACCGCCTAGCA
GAGCCTCTGTGCCAGGTGGATCGAGCCCAGCTTAATGGCTAGCTCACCCGATGTCTCCGA
TGACGAGGTCGACCTCACGATGGAAACGGGCTCTAACGACACCGTCCCAGCACCCGCGCG
TGTGCACGTCGGCTTCACCACGGAACAGGCGTAGGCGCACTACAACGTCATCATGGCGGA
GTTGCGGCCTACACCGGCTCATATGTCAGCGTTTCAGCGGGCGCAAGAGGAAGAGCGGTA
CAACTTGTTCCTCCTCAGGAAGCACTGGTTGGTGGAGGGCCAGATCGACAGCAAGCGCTC
GAGCGAGGATACCGTGGAGGCCATGGCCGCGACCAACCCCAACATCATCACGGAGCAACG
TGCGCTCTATGACGCCCTCTGCACTTAAGTCGTCGCTCGCCCACAAGTGTCCACTGCAGA
GGCAAAGCTGCACGCGATCGCGGACGAGAACAACGCCAGTTGCATCTCCTACGTCCCGCC
GACGAGTTGTCGTGCAGGCTGGTTCGACGACAACAATGCCGACGCCACCATCTCCATCGC
GGACCTCACGTCCACCGACACGGACAAGGTACGAAATTCTTCGAGGATGAGTATGGCATG
GGAGACGATAGAGCCTTGTGTCCCATGTGGGTCGGTGTGTCTCCCATGTTTTTACTCTTT
CTCACCGGAGACCGCAGCTTTATTTCATCGGTCTTATCGCCGGTGCTCATGAAGATGACG
GATGAAGGACGACAAGGATTTGAATGCCGGACGTCGTCGTACGATAGGTTTAGGGTGAGG
TCAGAACGGTTGTTTTGTTCTAAATATTCAAAATCTAATGAAAAGCTATCGCGTTTGCAT
GAATGTCGTTCGGTTTATATGAAATATGTCCGCTTTTATAAAAAAAATATTTCGTTGGTA
TACAATATTTGAAATGTACACGAGCAACGTTGGATGACGACCTCTCGCATACGTGTGTGC
AAACTAGTCCTTTTCCTTTTCGCGAACCGATGTGAGAGAACGGGTCATCATTGAAGATGC
CCTTACATTTGATAAATAGGAAAAATAAACAGTTTTTTTAAATAAACACTTTCTAAAGAA
AAGGATTATGAAACATGAACCATGCACGGACAGAAACTTGATAGCAGTACAATGTTGCAC
GAAACGGGGTTCTGGTTGTTCGCACAGTACAAGGGGTGACGGCAACGAATAGTATCAACT
TTTTCCATGGAAGGTTTTGTGTTTGCGCCGTGCCAGTACCGTGCGTGAAAGAGTGCCTTT
GCAGATATTAGCACGTGAACCTAAAAAGAAGAAGGTCATTAGCATGTCACGCGAATACTA
GAGCAACTCCAACACCCCATCTCATTTTGTCCACGCGCATCCGTTTGGGTCACGAGAACG
GAAAAATCATTCAAACGTGTCGATTTTAACGAACACGCGTCGCTTTTTGTCCGCATGCCG
ATCCATTTGCGGTCCATTTTTTAGCATGATTTGCGTGCGTCGGCGCGGACACGAGACAGA
CCCCGCACCACGCGCCAACTACTCCCCCTGGCCGGCCAGTCGGTGGCAAAGTCTGCACCA
TATCCCGCCACTTTTCTCAAAACCCTCCTACCCGCGCGCACTTCCGGCCGCTGCTCGCCA
TGGACGACGACCTCAATGTCGTCGTCGGCCTCGCCTCCCTTGCCTGATCCGGCATCATGG
CCACCTCCTCCCGCAAAGGCAAGCTTCGCGCCCCCCGCAAGACCGCCACCGCACCCAAGA
AGAAGGAGGAGCTGACGTCCGAGGAGCGGGCCAGGGAGCCGGCAAAGAGAAAGAGTTGGA
GGCACGAGGCGGACGCAAGAGACGAAGAGCGGCTGATAACACACAAGTATATGGGATCAC
AATAGTTTTTTAGGGTAGAGTATTCAACCAAATTTATAGATTCGACACAAGGAGAGTCAA
AGAATATTTGCAAGTATTAGCAACTGAGTTGTCAATTCAACAACACTTGGAAATTTAATA
TCTGCAACACAATAATATGATAGTTTTTTATGACAGTGGTAACAATAGCAACAGTAATGG
TAATAGTGATAGCAGTTTTGTAGCTGTTGTAACAGCAGTAGCAACAGTAGNNNNNNNNNN
AGAACAATATGTGGAAAACTCGTAGGTACTGGATGTTTGGGAACGTTGCATGGAAAACAA
AAAAAAACTATGCTTACCAAGATCAATCTAGGAGATGCGCATCTATGGGAGGAGAGATTG
AATCTACATACCNNTGTAGATCGCTAAGCGGAAGCTTTGAAGAACGCGGTTGATGTAGTG
GTA