Contig Data
morexGenes
Links



Map Locations of contig_53426 (5734 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_53426

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67660 1 474 bp AK368496 Not available Available None
MLOC_67659 1 607 bp MLOC_67659.1 Available Available None
MLOC_67658 1 1362 bp AK371559 Not available Available None





CDS Structure of MLOC_67660






CDS Structure of MLOC_67659






CDS Structure of MLOC_67658






Contig Sequence (5734 bp)

>contig_53426 5734 assembly3_WGSMorex_rbca.fasta
CCGCGCGCGGCGCCCCCGTCCGGGCGCCGCGGGGGCGCGGACGGCAGGGCGGGGGCGAGG
CCCGGGACGGCCTCCCGCTGCAGCGGCGCGAGGCCGCCGAGGCGCGACGGGTGGAGGGTC
TCGGCGGTGAGGTTGCACCGGAGGGCGCGCCAGTGCGGGCCGTGCGCCACGGAGTTGAGG
TTCTCGCTCCGCTGGCCGCCGCGCCGGCCGGCCAGGGCCACGTGCAGGCGCGCGGGCGGG
CGGTTCGAGAAGGCGTCGGCGTTCTCGACGAGCGCGCGGTGTGCGACGGCAGGGTCGGTG
ATCTTGTGCATGGCGAGTGAGGGTGGAGGAGGAGGAGCACGGCCGCGGCCGCGCCGGAGG
ACGGCGAGGAGGCCGCACAAGAGAAGCGCGAGGAGCACGAGGAGCTGATCCATTGTTCTG
TTGGAGCTGCTGTCTGTGAATGATCGTGTGTTCGGGACTCTGGACATTTATACATGGAGT
GAGAGAGAGAGAGAGAGAGATCGTGCAATATGACTAGGTGTGAGTGTGATATAACACTGG
CATGGCCACTCCCACCGAACACATCTTTTTAGTGTATCATCAGATATGCTAGTATATGAT
ACCTAGTTTTTGTTAGTGTTCTTTCCGCTCACTTTTTGGAGTGCTCTAGTTACATACTCT
ACATCTCAATTTGTTTGCAATTGAATGTTCACATTTCGAAAATAATGCACCAGTGTCTCT
AAGAAAAAACATCAACATTATCACTATATATATGAACTGATGATACGCCGAGTGTTGGGA
CGGGAACTGATTGGAATATATTTCAGTGAGATTGGTTGTATATATGAAGCATAAATATGT
CACATCATTATTGTACAATGTAAACAATTTCTCATGCATTTGTGTATTGAAGTAGATACT
ACTTTTCCACGCATGCATGGTTGCTTGCGCATTAAGTATGTTAGTTGGGTGGAGCATGCA
ATTAGGAAAGAAAGAAATAATAATTGATAAGATGACATGTGTGATGATGTGGCATATGAT
TGGGATTAATAGGATAATGGAGATCGACTTCTTAGACTACTCATAGTGAGAGTAACATAG
ATGGTAACATCACAAGTATCTAGCCAAAATATATGATGTGTCAAGTAACTAATAAAGAAA
GAGGTGCATGTATAACATAATATATTAGTCACCATATGAGTAACTCTTGGAGTAATGTCC
AGTCCCCTTGCATAGTTTGGACTTTTGGATTAATTTGCTGGTGCATGAATTCAATATGGT
ATCCGAGCTGACCCTGCCAACGCAGTATTAAAAATAATCAATTCTACGGCCTACATCGAT
CCCACGTCTAAGGACTAAATAAGGCTAGACGTGAGGGAGAGTGTCGAAATATATTGCCCG
CCGCCCTCCATCAGATCGGAATGATGGGTGAACTCGTTAGGTGCATAAACTTGCAACCAA
GAGGTTCAGGGTTCAAAACTCAGTAAACACCATAAACAACGATGCTTTCGACTAAATGCT
CCGAACGTTATGGGATACAAGACTCCAATGCATCTACCAAGGCGAATGAGCTCCCTCGTG
GCCCGATCCTTTATAAAAACACTTAGGATGAGTTTCAGAGAAGACGTTATTATCCATAGA
AAGATGAGACATAGATGCAAGGTTTTTATTGGCTTATGGAACTTGAAGGACATCTTTTAG
AACAAGATCACATTTTAAAGTAGGGGAATTAGTGCATGCTTGACCAATATGACAAATATC
CATACCTCCACCACTTGCGGTGTGAATTTGATCGGTGCCGAAATACTTCTCTCTCATGGC
AAGTTTCTCAAGCTCGTTGATGACATGGTCGGTACCTCCAGAGTCGGCGTACCATATGGT
TCCATTGCCACCTTGTTCCCTGATTGCGGCCGCTACATGACGAGCTTCAGGAACATAATC
CTCGTCATAACGAAGCCAGCAATCGAGCACTTCATGACCTGGTTTCTTGCAAAGTTGACA
CCGAACTTTTGTGGAGGAAGAAGATCTAGCAGGGACATGATTGTTGGTGTAGCCACCCCC
ACCAGACCGTGTGCCAGGATGGATATTGGTTGTGGCTGCCCTAGTTTTGATTGCCGCCTT
GATATCCTCGTGTGCGCCCACCCCTGTCACTGTTGCGGATGCGCCCTTGGTGGCCGCACC
CACGGCCAGCCATGCAGCCACGGGAAGCAGCATTAGCATAGGACTGTCGCACGTTCAGGT
CGTGGAGCAAATTGAGGTGAGCGTCAAAACTCATCAGCTGGTTGTAGATTTCCTGGACAG
TCACGGGTTCCACCCGAGCTGCAAGCGCCTACACGACCGGGTTATAGTCGAGGCCTACCA
GAACATGGGAGACAATCTCGGCACTGCCAAGCGCTGCTTCTGAAGACGCGATCTCATCGG
ACAGCATCATAATTTTGGCAAGGTAGTCCACCATACTCATGTTACTTTTTTTAGGTTTGT
GAGCAAAATGCGTGTGTGGATGGCATCATCAGCAAGGGGGTAAGAACACATTTCCATGGT
GAAAATTGAATTGACATTGTCATAGATTTCGAGATGCAAGCTGGGAACTCGTTCTTACTT
TTTCTTAACAAATTTGAGGAGGGTCATCCGGGTGGCAACAAAATATATCTACGGTACAAT
GTCCAGCAATCATCATAGTACGCACTTTCGATGGTGATCGTGATATCGTACATATATGTA
CTACTTTCTAGGACTAGGTATAGCACTTTAAAAGCTTACTATCATCTGAGCGGTTGCGTC
CGCCACCTCCCGTCCATGACACACGTCCATCATCGAACGCATTTGTGCAGCACCGGCTAT
GTTTCAAAAACATATACCATGTTGCAATGGTCTATAATGAGACTATATTTTGCGCCAAAA
TATCTACAGCAAAAAAATTATGTAACAAGAATTCGGTTGCAAACAAAATCGGAACAAAAC
CTCAGTTGCAACTTTTTTCTTGCAACAAAGCAATTGTTGCAAAAACATTCTGCAACAAAA
CCTATATTGGAGAAATAATTCCACAACAAGATCCGATGAATCTGACGGCTCGTGACCTCA
CTGATCTTTTAAAAAAATCAGCCAACGAATGTGTAGCACTCCCTTCTTGAATATATATGT
TTGTATGCACTTATTTTATTGTATCGTGTAAGGAGTAAACATTAAAGAGTTGTTGAACAT
ATATATGTTTATTGGTTTATGTTGTACTAATACTGTTGCTTGATAACAATTAGCTAGTGG
TTAACGTATGCTATAACTTATGATCTCAGTTTCATGCGAAACGCAATCATGGCAGCAAAA
ACATTGTCGTGGCTGCAGAATTTGAAATTTGTATGACAAAACTTTCAGTGGCGGGCACGG
AAACACACCCGTCACTGCTTTATCTTTAAGCATAGGCGGTCACGGCTGTGCTCCAACCAC
TTCAAACACTCTAAGAGTGGCAGGAGGCTCGTGACGGACGCCCCTGGCCTATCACTGATG
GCCTTCTTGTGTCCGTCACAGCTAGCATTTCTGCAGTAGTCAACCGATCATTGTCCAGAC
GCGTCCATGATTATTTAAGAGTCGGGTTTGCGAAGTCCGGTTGTAGATGCTCTTGGAAGG
AATCAGGCTACGGTGTTTGCCGATACCGTTTGGTCGACCACTTTGCGTTTGGATTACACA
TCGGCAAAACATGTGCGGCGGTTTGCAGCATGTGCGCTTGCTTGCTTGGATAATTTGCCA
ATTGGAGTCCATCACATGACACCCACCCCCATCTAGCGACACAATCGTTTTTTATCTTGG
GAAAGTTATTATTCTATGTTCTTCTCCATCGATAAGCCAAGCCATAGTAGATGGAGTAAG
CAGCTTGCGTTGAGCCAAGCACAGTTCAGTCAGTCGGCACATAGCTAGGCTTGACATCTG
GGACGCCGGAGTTGGCTCCAGCATGCCTCGGCGGCTGCTGGCGGTGGCCGCCCTGGTGCT
CGTCCTCGCCGCCGCGGGCGCTCATGGGTTCCGGGTCGAGGAGGCGAGCGTGGCCAGCAT
CCAGCTCGGCTTCAACAACGGCAGCCTCACCTCCGTGGACCTCGTCCGCTTCTACCTGGA
CCGCGTCCGCGGCCTCAACCCGCTCCTCCGCGCCGTCATCGAGGTCAACCCTGACGCGCT
CCGGCAAGCCGCGCGCGCCGACGCCGAGCGAGAGCGCCGCTCCTCCTCGTCCTCCGGCAA
ATGCCTGACCGCCTTCGGGCCCCTGCACGGCGTCCCCGTCCTCCTCAAGGACAACATCGC
CACCCGCGACGCGCTCAACACCACGGCGGGCTCCTTGGCCCTCCTCGGCTCCGTGGTGAG
GCGTGACGCCGGCGTGGTGCGTCGGTTGCGGCGGGCCGGCGCCGTGGTGCTCGGCAAGGC
CAACATGGACGAGTGGGCCAACTTCCGCAGCCTCGCCGGCACCGACGGCTGGAGCGCGCG
CGGCGGCCAGGCCCGGGTAAGTAACTGCACGACACAAGCACATCTTGTAATCCTCTCACT
CTGCTCCAATGGCGAACGAATTGATCCTCTGCATTCTGTAGTGTAGAACCCGTACGTGCT
GTCGGCGAGCCCGTGTGGGTCGAGCACGGGGCCGGCTATCGCGGCGGCGGCGAGCATGGC
GGCGGTGACGCTGGGGACGGAGACGGACGGGTCGATACTGTGCCCGGCGTCGCTGAACTC
GGTGGTGGGGATCAAGCCCACGGTGGGGTTGACCAGCCGGGCCGGAGTCGTCCCAATCAC
ACCTAGACAAGACACCGTCGGGTAACTGATTAACTGAGTATTTTGCATATTTTGGATTTT
TCGTCCCTATATACATTTGATTATTAGGATAGAGTTGTCATGTGAATAGAAAACTTATAG
AAAATGAGATGATATGCATTTCAAATCCTATGAGTAGATATATGAAAAAAGATGGCATTT
GGTTCATATTATGGAAAAATATTTATTGAGTCTAGGCTCATGTTTATTTTCCTTTGAAAC
ATGAGGGATAGGAACCAATCCTATTATATATCAGTATGAATTCATTCCTATGAACCAAAA
GACTCGAAAGGAAAAAAATCGTATAAGAATTCTATCCTATAGAATTTCTATGAAATTCCT
CCAAATCAATGGAGGTCATAAGTGTCGCGGTTTTGAACTACGGTTAAACTAATCTTACTT
CAAGATGGAGGCACTTATATTTTGAGTCGGAGGGGGTATGTGGGCATTCTTGTATTATGC
ATTACTATGCCAAGTTGACAAAGAAGATATGTTTTATTTTTCAGTGTGTCCATTTTTGAA
AGATAGAATCCATGTCAATTATATTTAAATATATGAATAGGGCGTGTTTAAGGTAAATCT
AGATGTGACATAGTTATTGTACATCTAAATGACTAAATCAAGCATAGAAAAGAAAAAGAA
AAAACCCACATGAATTTCATGTAAGATCAATGATATATAACTTAGATGTATAATATTTAT
CTCACATCTAGATGTGTTTTGGCAAAATCGATTTAAATATGAACTAAAATGTCAGGCTAA
ATATCTGGCCACTTCTGCCAAGATATAAGTTCATATCGACTGTCTGTGTAGTTTTCTTAA
ACAATATGTTGTATCCCTATAAATAACTACCCATATCAAAAAACTGGACAAAAATATCAG
TCGATATTTAGAAACTTGGTTGCTGATGCACCCTATATTTGCCTCTTCATTTTTCTATCT
TCCGAGTTCCCAAAAAATGGGGGGGGGGGGGGGG