| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_53352
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_67609 |
1 |
1347 bp |
MLOC_67609.1 |
Available |
Available |
LOC_Os01g05840.2, FRAME:+3, EVALUE:2e-161, 13101.m00569 protein oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed |
CDS Structure of MLOC_67609
Contig Sequence (3922 bp)
>contig_53352 3922 assembly3_WGSMorex_rbca.fasta
TATATATATATATATATATATACGTTAAAAATTTAATATAACAAGCAATTTATAAATTGT
CCGATTTGTATGCTAACTAGTTCCTATAAAGTAACATTTGCTCACAAAAAAATCTTATAA
ACTAACACGATCGGACGGCTTTTCTCCAGGTGGACCGAGAAGGATTAGCCAATCCGCAGA
CAAAACTAATCTTTCCATCGATCAATCCGTCCAGCGGATGAGGCTCGATGATGCCCAGAA
TGATGCGCATCGACCACCTCTTGTTCTTGGGGGCTCAAATTTTGTTTTTGTCTCCTTGTT
CTGTTATAGCAGTGTTTTTGACCTGTTCCAGGCTTATGCTGTTAAATGTGCATGCCGCAT
ATGTTACTCCTACCACATCACGAGCTTGTTGGTGTTGGGAGCTGAGAATCATCAGATGGG
TCTCCTGTCGCTCATCACCGGCCGGCCGGGCGCCAGCGGGTTCGGGTCGGCGTCCACGGC
GGAGCAGGTCACCGACGGCGTCGACGCCTCGAACCTCACCGTCATCATCACAGGTAACAG
CCAACAACACACTGACACCAACCATGGATTTGTTGGAGTAAACTTCAAGTTCTGTCACAA
TCAAAACCCTTTTGTAGCATGTTCGAAGGATCCATTCAGGGCGAGGAAACTCTGAAACTC
GTGTTTTATTCATTCACAGGAGGACCTAGTGGCATTGGCCTAGAGACGTCGAGGGTGTTC
GCCCTGAGAGGAGCCAATGTCATCATCGCGGCGAGGAACACGGAGGCCGCGTCGGAGGCG
AAGAAGAGCATAACGGAGGCGAACCCGACCGCCCGCGTCGATGTCCTGAAGCTCGACCTC
AGCTCCCTCAAGTCCGTCAGGGCCTTCGCCGAGCAGTTCAACTCCATGAACCTCCCTCTC
AACATCTTGATGTAACTAACCAACCTCACATCTTGATACTCCGGTTTCTTCTTCCATGTG
TACGCTGCTCTGAATAATCAAAGCCGTCCAAAACCCTTGTTGCTCTGCAGAAACAATGCA
GGTGTGATGTTCTGTCCCTTCCAGCTCTCCGAAGATGGGGTCGAGATGCAGTTTGCCACC
AATCACCTAGGTATTGTCTCAGCAGTACTCAACACCAACCATAAGAAAATATCTAATACT
AATATTTGTCTTGTCTCACATGTTATGCTCAACCAGGCCACTTTCTGCTGACCAACCTGC
TGCTTGATAACATGAAAGCCACTGCTGAGTCTACGGGTATCGAGGGCCGCATCGTGAACC
TATCATCGATCGCCCACGAGCATACATATCCCAAGGGGATTCAGTTTGATAAACTCAATG
ACAAGAAAACGTATGGGTTCCTTATGGTTCTTTGGAATTGGAGGAGATCGATTGTCAATT
GAACTGTTACTGATGTTTTTTGCATTGGCAGATTCGATAGAAGGTCGGCCTATGGACAAT
CAAAGCTTGCGAACATACTACACGCTAAAGAGCTCTCTAGACGGCTCAAGGTATTGTTTT
TCTCCAAATTTTCACCTTTTTACTTTACTTATTATCCAGGGGAATGGAACACTTTGTTTA
TCATGGTCACCTTTCATATTTTTTTGAATTATCTTTCATATTATTTCGATTATACTGGTA
GGGGTTTTGTATGTTAAAAATGGAACGTCTAATTGACTATTTTTTTATTCATAGCCTAAG
AAAGATGAAATACGCGAAATTCAGGGCTCATACTAATTGGGGGTATCTTGAAAAAATTCA
AACTATTCTGACACACCATAAACTGTATGTTACTGAAACAGGAGGAAGGAGCTAACATCA
CGGTTAATTCCCTTCATCCTGGAGTAATCATGACCAATTTGATGAGGCACTCCTATGCTG
TCATGAGTACGCTCCCAGACTCATTTTTCTGTTGTTTTGAATGTATTTGTCAAATGTCAT
GTTTTAGCTATGCCCCATTTTCTGGTAAATGCCTTTATGTCCCCACCACGTTATGAATTT
TTCTTTTAACTTGCAGAGGCAATTCAACTTGCCACTTGCTTGATCTGGAAGAATGTACCC
CAGGTTCTTCTCCACTCCTATCTTCGAGTAACGAATATTGAATTGTGTGGTTACTTCTGA
ATTTAACTTTGACTAATAGAGGATGCATTGCCGTTTCATTTCCAGGGAGCAGCAACCACT
TGCTATGTAGGGCTCAGCCATGAGCTCAAGGGAGTTACAGGCAAATACTTTGCCGACTGC
AACGAGGAGAAGACAAGCGAATTGGCGAAGAGCGACATCTTGGCGAAGCAACTCTGGGAA
TTCAGCGAAGAGCTGGTCAAGTCTGCGCATCAGATCTGAAAGCAGGCGACAGAAAGGCAT
AGTAGGAACCTACCACATGCATGGTGAACCAATGTTGTTCATTAACAAATTCCGTGCTTG
TTGTTTTGATCGTAACCTAAGATCAATATGCACCCTGGTTAAATTTCTCTAATGTGTTTG
CTGATCGGTTCTCGATTGGGTTAATGGGACTGGTATATGTCGTCCTAGTTTCAGATTTCT
GTTGCCTGAAATATCACCCAAGTTTCAGATTTATTTTGGTGTTGAGTGAAACCTTTTCAT
ATAGAGAAACAAACACGCCCGGCTATGATCGTAGAGTGAGTTCCGGACTGATGGAGCAAC
AAACACGTCCTGGTCAGCGTCAGTATGAACTTCTGATCTCTCTCAGGCGGCCATTTGGAA
CAAAGAAAGTGGGAAGGGAAGGGCTCAGCTCACTCACATGGATGCTATATTGTGCTCCCT
GTGCTTATCATGCCAGCCCCTGCATCGAATGGCCGGCATACCGATTTAATACTCCCTCCG
TCCCAAAANNNNTGTCTTAGATTTGTTTAAATATGAATGTATCTAGTCATGTTATAGTAT
TTAGATACATCCATTTCTAGATAAACCTAAGACAAGAATTTTGGGACGGAGGAATCAAAC
ATAAATGTATTGTCCCATTACATCGCAATAATCTAGAATTAACATAAATCTTACAAAAAA
GTCTTTCGCCCCGCTTTATTATATATAAAGCAACAATCGACATACAGAAAACAGACAACC
CGACACCACACACACCCAAGACAGATACAAGAGACTGTAGATCAGCAATACTACTCCAAA
ACACGAAAGCAAACAACTAATAGATATAAGGACAGCGTTAAGGGACGAAGGAGCGCTCCA
CCGAGAACGAGTCGCGCGAGGAGACGAAGCTGAGACTCAACGACCCAGGAAACTCCAAAG
CGGTGCTTCCAAGTAATAAACATACCGGAGAGCCGCCACTGCCCGATCCACTGAATCGAA
GTTTCACCCGGAGTACTGCGAAGGACCACTAAAAGGAAATACCTTATAGATAGATGCTTA
GCAGTAGTGTGGGAATATGGGTCGCGCTACTGCTAATTAGTAGTAGCATGGGGAATAAAA
CCCGCGCTACTGCTAAGTTGATAGTAGTAGCGCGGGGTATAAACCCGCGCTACTACTAAG
TGGTCTTCATTGTGCCTCTCAGGACAAGCCATACTAGTAGCGTGGAGTATAAAACCCGCG
CTACTGCTAAGTTGATAGTAGTAGCACGGGGTATAAACCCACGCTACTACAAAGTGGTCT
TCACTGTGCCTCTGGGACAAGCCATACTAGTAGCATGGGGTATAAAACTCGCGCTACTGC
TAAGTTGATAGTAATAGCGCGGGGTATAAACCCACGCTACTACTAAGAGGTCTTCATTGT
GCCCCTCGGGACAAGCCATACAAGTAGCGTAGGGTATAAAACTCGCGCTACCGCTAAGTT
GATAGTAGTAGCGCGGGGTATAAAACCACGCTACTACCAAGTGGTATTCATTGCGCGGGG
TATAAAATCCCCATCTCCTCCCCCAAATCCCTCCTCTCTCATGTCACTCTCCCCCCTCTC
TCCATAGGCTCTCTCACGGGGC
