Map Locations of contig_53276 (10475 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_53276

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67567 1 836 bp None Available Available None
MLOC_67566 1 6862 bp None Available Available None
MLOC_67568 6 8628 bp None Available Available None





CDS Structure of MLOC_67567






CDS Structure of MLOC_67566






CDS Structure of MLOC_67568






Contig Sequence (10475 bp)

>contig_53276 10475 assembly3_WGSMorex_rbca.fasta
AAAAAAAAAAGAAAAAAAAGAGGAGCAAAAGTACCCCAACACGAAAAAAACAGGCAATCC
AATCCCCCCCCCCCCCTCAAGGTGATTACCAATAAGGTAACCGACGCTGCTAGAAATATT
GGTATCAGTGTTGACCAACTCCTAGGCAACGAGGAAGTCCCCGTGACTGAAGTAGCATGG
CAATATGCCCCGTGAAAGCTCTGGTCAGACCTGAGCAGGTCCCAAATCTATCAACACGAA
TGCAAAGATTGCATGAGTGATACATGAAAGAAGTTGCCAACGGACGAGTGATGCTCATGG
TGAAAGTCAAGAAAGGGCTTACTACTATGAAAATGAGCTATGCATAATGTTTGACGAATC
GTTTCAGTTATACAATCAAGACTCACTCGAGAAATATATAGTCAGTTGCTATTTTGCCTA
AGTGATTTCTTTGTGTAATTTAAGTCTCTAGCTCAGCTCGTTCATTACGTGTAATTATCT
TCACTATATTCTTTTGTATACTATTACGCAGAATGAAGATTCTCAATGCAAAAGAGATAG
AATCTATGACATTGGGTTAGTTTAACCATATATTATTAATGAAAAATTGATAGAAGACCA
TCCAAAGACTAAGAGAAGAACTTGCTAAGAATTTTAAAGGCACAGAATACCAAAATAGAA
ATATTATTTTTTTACAACTTCAAAAGAGTGTTACTATCTTATACTACAAGTTCTATTTTG
CTTACTCGATGTTAAGTGTAATTGATAAGTTATGCATGTCTGCTTATATAAATGTGTGCA
TGTATTGCTGGATCCTGCTAATCGTTAAAGTTAACGCTGAAACTGTTGATGCCTTGGATT
CATAGGTAAAAACCCTCAAGAATACACCAACGTGGTTAAAATGCTCGACGCGTAATATGA
ATCATTATCACAATATATCGACCTTTTTCATTCATTTCCTGATATCAAAAAATTAATACC
TATTTTATTCATTTTCTCTGCCGGGCAGAGTTTGAAAACGGTTCATCAAAGATGTTGTCG
GTGAATAGAAACCGAAACTACGTTGACGACTGGTCAAGGTAATTAAGTAGTACTAGCTAG
GTCCGCGCATTTCTTTAATTCTAGTTTCAATATCATTATCATGCTTTATTATCTAATTGA
ATTCTATTTTCATAAAGTACATGAGGCAGAAACAGAGACTAATTTATATGCATACTACGT
TTATGAAAACGTTTGCATGTCGATCAAATGGCACAAAGATGTACCACAACTTATACGTAA
ACATTGTTCATAATATTTTTTTATGATGATGTAACATATATACACACACAACTAATATAT
CCATATTGGTATTTTTCTTTAAAGATTAAAGACATGCGGGAGAACCTCCTACCAAAGATC
CGTCTACGAGCAGGAATTGCAGTATTTTTGTTTACGAAGGTCATATCTGAAAACGAAGAA
TACCATTATGATCTTTAAATTGTAGGAAAGATTGTATCAACAGCCTGACTAAACTTGCCC
AGATTTTTCATAGCATCCAAAGACGATCCAGTATTCAACTAGGACTGTTCTAATGCAAAC
GATACAGAGGAGCTAACAGCAGTTCCCTCCACATTTTCTCATCCGGGCTTGGGACCGGCA
AAGGCAGTGTTAAACTACAAAACTACTAAACACATAAATAAGCAAACACAACAACCAATT
ATTCAGCTAAGCGTACAAGCCACACACAATCAACCAGAGGCAGCATTCACAACGCACGAT
ACGCTATTGGCAATAAATATTCACGCAACGTTTTCACAAGATCACAAGACAGTAATGGGT
CACACAAAAAAAAGCTATAAATTCCAGAACAAGAATGGGAATTCTTATGGGGTGAGGGTG
ATTCAGAACTTCAATCTTGAAAATAAGAATATATACCAGCATATAGAGGGTGATCATCTT
CGTCTCTAGACACAGAGAAAGCTTTCCTAGTTTTGGCCCATTATATAGATATATATGAAC
AAATATCTCCTTGTCTTTAAAATCCAATATGTATTATATGTATTATGCAACAGAATGGTG
ACATGTGTATTTTTGCTAGTTGCCAACAAATTAAAACTGGAAGTTACCAGAAAACTCAGA
ATGTGTATTGAAGATTCAATCCAGATCAAATTAGCAGTTCGCGAAAAATAAATTAACCAT
TAGAGGACCATAAGATGTGTGAACGCTATGTAATTATAAATTTAACAGTAGATAATGAAA
GATTCCATAATCCAGATCAAGTTAGCAATTAGCAGTAAAGAGATCAAAATAGCCATAGAA
GACCATAAGATAGTTGAAGATTCACAATCGAGAACAAATTAGCAGTTCGCCAAAAAATAA
ATTAGCCATTAGAGGACATAAGATGTGTGAACGCAGTGTGGTAGTTATATAAATTTAACA
ATAGAGGATTCCATAATCCAGATCAAATTAGCAGTTTGCCGTAAAGAGATCAAATTAGCC
ATTAGAGGACCGTAAGATATGTGAGTACTTTCTGTCTAAGTCCAGGATGAGCAAGTATGA
AACAAACTGCCATATGTTGAAAGTAATCAGCAGGAATCATCAAATTAGCCTGACTGTTCT
GCTAGTTATCAACTTAAAACTAGGAAGTTCCCAGCAAACCAATAAGATGCACTGAAGAAT
CCAGATCCCACTCGAGAAGCGCCAACGACAAGAACATCACTTCTGAAAATCATATCCATA
CCAACAAACCAGAATCATATTTAGTGGAGTTGACACTAATCAAAGACATGAGTAGAGTGT
TAAGGGCAAAATATTCGTTCAAGCTTCCAGTTCAGAACCTTCAACTCTCCATTGTTTTAG
TATATAGCAATCACTCCTAACCTCTTTTTGCTCAAAGTGGTCAACATTACCCAAATACAG
GAGGCCACTGATGTTAACAGTTAAACCAACACAAGTGGATGGGTGGGATCTTTCTTTATC
ATTAAAGTTAAAAATATGTGCACACCAAAATTTGATTTTGTGTCAGAAGTGCGATCATGG
ACAACAGTATGAAGAACAGTAAACCCACAAATCCAAGTATGACCAATTCATATATAAATG
TATGAACATTTTTACTGCATTCAGAGCTCATGTACATGCGATCTTTACTTCCTATCATAG
GTGATAAATTTGCAAGTTCAAAGATACAAGCAGCCAAATGTCAAAGCCTAACTTCCTGAA
ACAGTATGGTAACCAAGTAATTTATAGCCAAATCAAAATTTGATAATCTGCTATACAAAC
TGAGTATGAACTGATATTTCCATTCCGGACCCTTGTTTGAGACTTCTAGCATTTTCTTGA
TTCGGACCAAAAGATGACATCATATTCCATCAAAACCACATGCAAGTTGAAGCAGATACC
ATAATCAGCAAGATGTCACACAACAGAAACCAAGTAAGATGCTTCATGACAGTTGAAAGA
ATCAGATGTGCACACTACCAACTCCAAGCTGCGCCAAAGAGATGAGGCCACCGAGTGCAA
GTTCAAATTGAAAACTACCACAAAGACCAAATAACGTAATATGCTTCAGTATCACTAATC
AGAAGTCCAAACCAATTTGATAGCTTCAGCAAGTCCCCGCACTAGCCGAATTTCCAACTC
TACAATCTTGCAATAAAACTTCCACCACTGCAAATCAATGAACAGCTCAAAATATAGTCG
TCATACTTAATATTTCTTCAACGAAAGTCCATAATGAAATCTTGGCAATGAGTGGAAATA
AGTATGGAATCTAAGTGTAAGATTATGTGGTTGTAGAGGACTCCTTCATCCAGAACGAAG
CTTCCAAACTAGCCTTTAGAACTCTCCACTTCTGCGGATCAGTTAGAATACTCAGGTAAT
TGGTTCTCTAACGGAATAGAAAATGTGAAATAAGGTCTCTAAACAGATTTTTCACGCAGC
ATGACCTCAAATAAAATTGTCAAGTAGACCTGCAATGAATAAAAGACCTAGCCAGTTTGG
AGAAAGCTGCTCGACATCTTAGACATTTAGTTAAGTTATGCACATTGGTTTGAATTATTG
TCGCTGTATAGTACTAACAAGAGAAGAACAATGTTTGGAATGTATAAAAGTTACCAAAGA
GAAGTTTGACAAGATCGACTCAAGAAGAATCTCCTAAAGCTCCTCTGTATCATTTTGTCC
ACGCAAGCCTTACTCTAAAATGTTGGAGAACAACCAAATATCAAATATGCTTGGAACAGA
AACGGAACTGCTCACATGGAGATATCAAATAGGAGGAGAATATATCCAGACAGTTCAGTC
ACGCTTCGAGACACATTTGAATCCTCAACCGTGCAGGCCTGACCAACAACTCCGATCCTG
AACTTAAGATATCATCTGATGAGCTAAAGGGAACAGCCAATACAATCTCCGCTGGTTTGT
CTCTAAAGGCGCATATACCATGAATGAGATAAAATTCACCTTGTACTACGTGACAAACAG
AATCATTGATTAGCCATTGAAGAAGAGAGAACGGGGCTTATTTTGCAATGAAGGCAGACC
AGACACTGACCTGACTCTAAATACAGGGAACATCCACTAATTCCAACATATACTGCAAAC
AACAAACCTAGCAGGCCAACAAAACGGAAACACATGGATTGGGGATATAACAAAGTAAAC
CAGAGAGATCACAAACCAAAAAGATGACAGATTTTGACTGGTTACCAGCATGGCTTGCGC
TAAACAATCTGCAACTACAGGAAGGCGGAAGCAAAAAATCACCATCAATGCTACATGCGA
AAAGGAACTTAGACAACAGAAGTTTCTTCAGGAGATAAAAATAGAGAGCACTGAGTTTTT
TCGGTTGTAGGATGTCCCATCTACATTGAAGCTCCAGAGCAACCTTCGAATCTTGTACAT
CCACCAAATCAATCTGAATATTCAAATTTTGTCTTCATAAGATAGTTTATAGGAGTATGT
TGGAACAAATTACGATGAATTGGAAAGGTGTAGTGTTTAGAAGATTTTCGAACAGATAGC
TCAGCAACAGGTTGGGCCTAAATCATCAATTAGGATCTGCAATGACAGGAGACCTTCCTG
TGAATTTTTGCTTTGGGGAAACGAAGCTTCTTAAACAGCTAAATAATGCATCAAACAGTG
AGGGGATAGGATAAGCCTGCTTGGCCGGGAGAGATCAGTTAGGCAACAACACCAGTTCCA
GATAGCAAACTATATTATCTCTCGTCACAATATCTGCAAGGACACATGGTTACCAAGGGA
AGAGAAAACCATGTCTTAGAAATATAACGTTCAAAGCGAATCAGGAAAGATGAAGTCAAT
CTAAGAAACCGCCTGTAACATGATGTACCAAGAGGCACCTTCCGGGAAGTCCCAAAAGTC
AAATAGCTGGAGAACCAACAGTTGATATCAGAGATGTTGTAAGCTAAATTCGACCGTGCA
AACAAAGAAACTAAATTGAGGAGGGTCAATAATCCAAACACAGTTTGCAAATTCTCTGAT
CCCCATTCCATGGTTAACGATCCAATCCAACTTCAATCCGAAACGAAAACTTCAGCACAC
AAGATCCTGGCTTCTCATAAGGCATTGAGCCATAACCAATCAAAATAACCACAAACAGTA
AAGCAAACCTCCACCCTTCGATTCATCACTCCACAACCATCGCCCTCCTACATCTGAAGG
AGAACAAACACATACCACAAGCGAGATCAGCTGTTACAGCGAGAACCAACAAGAATCCAC
CTCGTATTAAGGGATAGCAGTACTCATGTTGAGCCATCAGACAAAGATAAATCGAAGAAC
TTAAAGGTATAGCCACTCAAATCTGATGTCACCGAGACCAGTGTGACCAAACATGGGAAA
CTGACCTGCCTCAAGTCCCCTTCACAATACTGTTCATGTACCATAGGGAGGTTCATTTCC
AGACCTGATCCAGTCCTGCAAGCTAACTCACGGAGGTGGCCGAGAACAAATGAAACAAAC
AGGACCGTCTACGAGACACTTACCTGACTCCATGTACAGAGGTTGGGGCACCAAATCCAA
ACTATTATATCCTGCAACCCACACTCGGAGAAGACCAAAAGAACACGGGGATCAAGAGTG
CCGAAAACACCGAATCAAAACATTAAACAGATTCTGCGTCATTAGCCACATGGCCTGGGC
TAAAGAAAAAATCTGCAACCAGAAGGAGGGCAGGAGCAAAAACTTGTATCGAAGACATGG
CCAAGTAGCTAAATGAAGTAAAAAAAAGGAGGAGTCTATTTCAGTTGTAGGATGTGCCAT
TAGTTGAAAGCTTCGGATTGTCCTTAGATTCATGCACCTTCGCATATCTGTATTATAAAA
TATTGCCTAGTAAGATAATTTGTAGGTTATGTAAGTTATGATGAATTGAAACAATGCTCA
TAGATTTAGAAGATCTGCAAACGAATTCATCATCAGGTTGGACTTAAGTTCATCAACTGC
AACCTGCAACAAGCAAGAGGCCTTTCTATAAATTTTCAGTTAGGGGAAAATGTTACTTTT
ATATAAATAGCTAAAGCATGGATCAAACGATGGGCTGGGAACAAGTAAGCATGTGGCGGC
TAGGAAGTTCAGCTATGGTTGACGGACGACAACACCAGTTCCAAACTGCAGTTGTATCAT
TTCCATGTCAGTATCTACAAGAGCTGAGAATTGCCGACTAAGGCGGAGAAGACATATAGC
TGAATGAAATAGAAATAAGAGGACAAGAGGTTTAAGTTTTTTCTGGTTGTAGGATGTGCC
ACTAGTTTGAAGCTTCATTATTTCACCTTTGCAGCTAAATCTTAGTTTGAAATATTACCT
AGTAAGAGATCTTATTTTTATTATCTAAGTCAAGGAATTTTAAGAAGATGTTAGATATAG
AAGAACTGCAAACTCAATATCAGGTTGGTGGTCTTGAGTTCGTAAACAATGACCTGCAAC
GAGCAAAATACATCTCTATAAATGTTTCAGTAAGGGGAAAACTAGTAGGATTAGAAAACT
AAGTACAGACGAATGAGAAGGTAAAGGATGAGTAAGTCTGTCTCCACTGTGAAGGTCAGG
TAGACAACACGGGTTCCAATTTTTATCCCTTGCAAGACACGATCTGCAAGAGCTAAAAAT
GGCTAAGGCAGGGAAAACTAGTGTCTGCTGAGTTCTAATGAATATTGAATAAGGAAGGTC
CAAAAGGTTTAGCCACAGAAAAAGAACCGCCATGCTGAGCCAAAATAGGAGCAGCCGCTA
GGCCCGTGTAATTCCAGATTCTGGATAACCAGCAAACAATCCGAATCAGAATCCTTGGGA
GAATAATTGAAACTGTGGAGAAGAACGAATTGAACAGAATTTTGATCATCCAAACACAGG
TCGGTCAGCAAGAAGATAGTACGTCGTTCTCACTAAGCCAAGTAATCCCAATTTCTGACA
ATCAGCAACAAATCCAAATCAAAGTTGTGAGGCTAAAACTGAACGAATCCAAAGCAAATG
AAGTGAAATTCAGAGGGATCATCTGAACATGGATATCAAGTTCCAGGTTGATGAGCGATC
CAAAACTTCAGTCCAACACCAAACATAGACTCTGACCATATCAGAAACCAAACCTCCACC
CTTTCGGTTCATCTCTGAGGAACCACTTCCTGCTTCTGCTGAATCTGAAGGAGCACAAAC
ACAGACCACAAGCGAGATCAACTGCTACAATGAGAATCCACCAATACCCCAAATCCACCT
CATATTAGCTGATTATATGATGGAACTCATGATGAGATCTAGAAGACCACACTGGCAACA
TGCATTTAATCCTCAAACCCCTTCGACATATCAGATACTATCCAGCAACCAACCCATGGA
GGCCAACACAAAATGAACCAACAGTTACTGACCTGAGTACCTGACACCGTGAAATGCACA
CAGCAAAGGTTTGCATATGTAGGCCCAGACTTCGTAAATATATCCTGCAGTGCAACCCAC
ACACGTATAGGAAGACCAACACAGGGATCAAGAGTACAAATATAACCAATCAAACAACAA
AGAGATGGATAGCGAACCAGAAGTTTTTTGACTTGCTACAAGCATTGTCTTAGGCAAAAC
AGATCTGCAGCGACATGGAGGGCATAAGCAAAAACCTAAATAAAAAACATGAAAATGTAG
CTGAATGAAATAAAAATAGGAGGGTAAGAGATTAAGTTTTCCTCCGGTTGTAAGATATGC
CACTAGTTTGAAACTTCATTCTTGCACCTTTTGCAGCTAAATCTGAATTAAAAATATTGC
CTGGTAAGAGACCTTATTAACATTATCTCAGTTAAGGAATTGAGTAGATAGTGGTTTTAG
AAGAACTGCAAACTTAGCATCAGGTTGGTGGCCTTGAGTTCGTAAACCTGCAACGAGCAA
GGTACCTTTCTATAAATGTTTCGGTCAGGGGAAAACTAGGATTAGAAAACTAGGTACAAA
CGAGTGAGCAGGTAATGGATGAGTAAGCCTGTGTCAACTGGGAAGGTCAGGTAGACAACT
ACAGGTTCCAATTATATCCCTTGCAATCTGCAAGAGCTAAGAATGACCAAGGCAGGGAAA
ACTAATGTCTGATGAGTTCTAATTAATGATATTGAGTAATAAGAAAGTTCAAAAAAGTTG
AGCCACGAAATAGGAACCGCCATGCTGGCAAGGGATCATAGGAGTACCCGCTAGGCCCGT
GTAATTCCAGTTTCTGGACAAGCAACAACCAATCCAAATCAGACTTGTTGTGAGAATAAT
TGAACAGTGGAGAAGAAGAAATTAAAACAGAGTTGGGTCATCCAAACACAGGTCAGCAAG
AAGATAGTAAGCCGCTCCCACTAGGCCAAGTAATCCCAATTTCTGGACAGTGAGAAGCAA
ATCGAAATCAGAATTGCTGGGAGGCTAAAATTGAACTCAGGAGAGGAAGTAATTAAATAG
AGGTAGTAATATTATTCATCCAAACGCAAATCAGCCAAAGATAGGTCGCTCCGGTCCGGT
CCGCTTAGCCGTGTAATCCCAATTTCTGGAGAACCAACAATCAACGAACCAAAATCAGAT
ATGTTGCGCGCTGTGCAAACCAAATAGATGAATTGGGAGGTTTTGATTTATATTGTTATC
CAAGTGCAGATCGAAGTTGCAGGTTGATTGAGATCCAATTGATCGCCCTGAGAATATCTG
ACCATAACAGAGTAACCGCTGAACCGTAGCCAATCAACCAATCAATCAATCAAAATAACC
ATGAACAGAAATCAAACCTCAACTCCGCCCTTCTAAATAACCTACCATCACTTCAGAACT
ACCGCTCGCCATCTTGCTTGTGTATCCAAGATGAGAGCACACATACCAAAAGCGGGATCA
GCTGGTAAAGTAGTAAGAATCCACGAGGGCCTCAAAGAATCGACCTCGTGTTAACTGATA
CATACTCGATCGGGAACCTAGAACCGGGAGACCGCACGGGCGACGGCCGTTGAATCCAAA
TCTTCTGAAATCACCGAGGGACGCAGGCAGGCGACGGAACCAAGGAACCGACCCGACCCG
ACCCGACCGATGGAGTTCGAGAAACTGACCTAGGGTCGCACGGAATCAGACGCGGGAAGC
GAAATCGATGGAATCCCCCATCGATCGATCGATCGGATCGCTACCCCCGGAAGCGGGCCG
AATCCCCTGCGAGCACAGGAAGCAAAGCCGGCGAGGAGCGGAGCAAAAATCAAAGGCGAT
TCGAAACGAATCGAGATGAGGGACGAGAAAGAAAGAGGAAGGAAACAGTCGCGGAGACGC
GAGGAGGCGACTCGGGCGGAGGCGCGGCCCGAAACGAGAGCTCCGAAGAGAGAGGGAGGA
GGCGAGAGCGCGGGGTGGAGAGGGCGCACCTGGGCGCCTTTTATAGCCGGAGGCGGAGGC
GGAGGCGGTGGGCGGCCTGGCGCCAACCGGATCCTTACCGGACACGGCTTCGTCTTCGCC
GCGCTGGCGGTGGTTTTCCGTGGACGGGTGGGCGGCGGAAATCAAAAGCGAGCGGAATTG
GTGGATCGGGCTGGATCTTGACTTGGTTTGGTTCGGTTCGGGTGGACGGGCGGCTGGCAT
GTCGGCAACGCGACGCGGGAGATAGTTGCGCTGCGCGTGGACCTTGGGTTGGGACTTGGG
ACGTGGGTCGCACCGACGGACCGGGAAGTTTCCAGGCTGCTCGGGGGTCGCGACGGCCCA
TGTGCCTGCGGTTGATTGCTGACCGTGTCTCTCGCGCGCGAGCCACGACTAACTCGTGGA
TGAGAACGTGCAAACAAGTGGTGAGGTGGCCCGTGGGGTGGTCGTGAGAACCCCGCATCC
CATCCCCTCCCGTAAATATTTTTGCGGGACGCGGTAAAAAATTCTCTCAACCGGGTCGGG
AGGCCGACCCGAGCTCAGCCTCTATCCGCAGCAAGATTTGGCAGGAGGGACATTTTCGCG
CGGCCTTTCCCGCTTCCCCCACCCGTCACCACCATTGCCTCGCCACCGCACACTCCGGTG
CATCCTCCGTGGCCGTCCCTCGCCGCCATGGACGC