Contig Data
morexGenes
Links



Map Locations of contig_53232 (5312 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_53232

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67531 6 3750 bp MLOC_67531.6 Available Available LOC_Os02g01590.1, FRAME:+2, EVALUE:0.0, 13102.m00080 protein glycosyl hydrolases, putative, expressed





CDS Structure of MLOC_67531






Contig Sequence (5312 bp)

>contig_53232 5312 assembly3_WGSMorex_rbca.fasta
CACCAAGGAAGAAACCCTCCCCTCCTCCCCAAAATAAGTTGGCTTACGAGAAGAGCATGG
AGGAAAGAGACGCCCAAGTGGCTAAGGAATTGAAGGCCCATTTTGGACCAAAACCACCCC
CGCTGCCAAAGGAGATAGTATGTGTGGAAACCGTGCAATGCGTTCTGGCAAATCTTGCTA
AACCGCCTCCAAAGAAGAGTTGATCAGACTATGAACGCTCTATTAGCAAGTCATATCAGA
AAGGGCTAACGAAGGAGTCGGTCCGTAGTAAAAGAAACAGGAAAACCATTCCCCATCTGG
GAGAACAATCAGTGCAATGAATCCCGTCGCTCAAGGTAGGTACCGAGGTCATAATCGATC
CCGCTGCTGCAAAAGAGATGTATGAAAATATGGCTAGAGAGGCCGCTGTCATCGTTGAAC
AACTTCGAGGCGACAAGGAAATTCCCACGGTGGAAGGGGAGAAACTAACATGTACATTTG
CCCCTGGGCGACCTCTCGTCAGGCCTGGGCTTGTCGAGGAGCTACCAACACAAATGTACA
GATTGCATACCTGGTACATGAGGAAAGCAAAACTCGGCGAGAGACCCTCATGGTGAAAGT
CAAGGCAGAGAATTTTTTCAATAAGAAGGAACTGTACATTCAAAATCCAGAATTGTGGCC
GTTATTCATGAAGGGTATTTTTGGCAATGATCGCGTGCATGTTCAGGTGCGCTATTTGTC
TTTTATCATTACTTGCATGGAATTTGTTGCAAATTTTCACTATATGTTAGGTATTTGTTG
TGAAATAGATGAAAAAAGGCTACATTTGTGAGGCAAAACATGATCATCAGCCAATCAACT
CGATAATTAACATGGAATAATGTGGCAATTAGCTACAACATGATAACTTATATCTATCAA
GCTTTAACTATGAAATCCTTAATGTTGGGCATTTTAGTCATTTATCTCCAAAGCCACAAT
TCACGCCGCTAGTTACCAAATGGCTTTGAAGCTTTCTCACAGCATACAACACACAACTGC
CAGTTATTCAGACACTTTCTTAGCCGCCTGTTGATGAAGGGTTATTTTGACCATATATAC
GAGGATAGCTGTACTGTGTTTTTAGCCTTAGGTGAGACCCCCCTCAGGTGACTACACTAG
CTCTACAGCTTCACCTCAGCGCACAACCCATAACTGTTTTCGTCGGCTACTTTCCACAGC
TGTTTTATGGTAAATCACAGCCGAGCCTAACACAATCCTGATCGTCCATCGATAAAGAGT
AGTTTTGGCTACATGAGTATATACAGTGTTGCACACGCATTTTTACACACATGGCACGCC
AAAACCTCTGACATGAGTATAGTTTGCTCTACAGCTTTCTCGCAGCGCACAACCCATAGC
TATTTTTTGTCGACTAGTTTCACAAAGCTGTTTTGTGAAAAATGACAGTGCAGCCTAACA
CACTCCTAGCCGTCCGTCGATGAAGGGTAGTTTTGGCTACACTCGCGTCCACCTGTATGC
TAGCTATTTGGAGTTTTGGACTATGTTGGTAGGCTCATGTGAGTTGTGACACGCCAAAAC
CTCAGTGAAAACCCGGCCCACGACACGATGACCGCTCCCATCTTACCGCCGCCCAACTAT
GAAGTATCTATAAATGGCGCTAGCTCGCCGGCTCCAGAACCCACGCCCATCCACCACTCA
GAATCTACCAAACCCTCTCGGAGTTGACGAGCGGCGCCGCCATGGGGTCACACGGCAAGC
CACCGCTACCGTATGCCTACAAGCCGCTGCCCTCGGACGCCGCCGACGGTAAGCGGACCG
GCTGCATGAGGTGGTCCGCGTGTGCCACCGTGCTGACGGCCTCGGCCATGGCGGTGGTGG
TGGTCGGCGCCACGCTCCTGGCGGGATTGAGGATGGAGCAGGCCGTCGACGAGGAGGCGG
CGGCGGGCGGGTTCCCGTGGAGCAACGAGATGCTGCAGTGGCAGCGCAGCGGTTACCATT
TCCAGACGGCCAAGAACTACATGAGCGGTACGTGCATTTGTTGCTCCATCCGTTTCTTTT
TCTCTGGCGTTTCTTTTTCTCAAGTTGAAACTGACGTCGCTGCCTTTGCTCTCTGTTTGC
CGGCGGTCGGCGACGGCGGCGGGCTACTCCGGCGACATCATGCAGATCCCAACGGTTAGT
ACCCTGAGCAGTAAGATCTTGCGGGGCAAAAGACGGGATCTCTAGACATAATCCAAGTTG
TTAAACCCACACCAAATTTGGGCTAAACCATTGGCAGCAAAACAGGGGAAAACAGAGTTT
CCATAGATTGGATACGTTCATAATGTGCCCCCCCTTCCCAAAATGCAAAGCATATAAATT
TTTGTCCGACGGTTAAACTTTTTTAAGTTTCAATGTGTCCATTGTGAAATATCTTATAGT
AAACTTACTGCCACGCATACTTTAATTTGTAGATGTACACGTTTTTATACTTTATTCAGT
AAGGAGGGAGTAAGATACACAATGAAGCTCAAGAGTGATGTGTCATACCCCAACCACTAG
AAAAATAACAAGGTTAAAAACATCTGACCAACCAATACAGTACACAAACTTGTGAGGCGC
CATCAGTTTCTTTCTCAACCAAACAGAAAGAACAAACATGCAAACAAAAAAACAATTAAG
CAAGTGTGGGGGGGTGAAACTTGGCGAGATAATTGGTTTGGTTTGACCCATATCTGATTA
CGATTAACTGAAACCACTGCAGGCCTGATGTATTACCGTGGATGGTACCACATGTTCTAC
CAGTACAACCCGGTGGGCACCGACTGGGACGACGGCATGGAGTGGGGCCACGCCGTGTCC
CGGAACCTTGTCCAATGGCGCACCCTCCCTATCGCCATGGTTGCCGACCAGTGGTACGAC
ATCCTCGGAGTCCTCTCCGGCTCTATGACGGTGCTACCCAACGGGACGGTCATCATGATC
TACACGGGCGCCACCAACGCCTCCGCCGTCGAGGTCCAGTGCATCGCCACCCCGGCCGAC
CCCAACGACCCCCTCCTCCGCCGGTGGACCAAGCACCCCGCCAACCCCGTCATCTGGTCG
CCGCCGGGGGTGGGCACCAAGGATTTCCGAGACCCGATGACCGCCTGGTACGACGAGTCC
GACGACACATGGCGCACCCTGCTCGGGTCCAAGGACGACCACGACGGCCACCACGACGGC
ATCGCCATGATGTACAAGACCAAGGACTTCCTCAACTACGAGCTCATCCCGGGCATCTTG
CACCGGGTGGTGCGCACCGGCGAGTGGGAGTGCATCGACTTCTACCCCGTCGGCCGGAGA
AGCAGCGACAACTCGTCGGAGATGCTGCACGTGTTGAAGGCGAGCATGGACGACGAACGG
CACGACTACTACTCGCTGGGCACGTACGACTCGGCGGCCAACACCTGGACGCCCATCGAC
CCGGAGCTCGACTTGGGGATCGGGCTGAGATACGACTGGGGTAAGTTTTATGCGTCCACC
TCCTTCTATGATCCGGCCAAGAAGCGGCGCGTGCTCATGGGGTACGTCGGCGAGGTCGAC
TCCAAGCGGGCTGATGTCGTCAAGGGATGGGCTTCCATTCAGGTATATATATATCCATCT
ATCTATATCTATACAATACATAGATACATAGATGGATTATGATTGTTTGACCTTGCATCT
ATCATCACTTGTTCATTATACAATACATATATGTTCATCACTAACTAATGGTGTTTGACA
TGCGTGCGTGCAGTCAGTTCCTAGGACGGTGGCTCTGGATGAGAAGACCCGGACGAACCT
CCTGCTGTGGCCCGTGGAGGAGATCGAGACCCTCCGCCTCAATGCCACGGAACTGACCGA
CGTTACCATTAACACTGGCTCCGTCATCCATATCCCGCTCCGCCAAGGCACTCAGCTCGA
CATCGAGGCCTCTTTCCACCTTGATGCTTCCGCCGTGGCTGCCCTCAACGAGGCCGATGT
GGGCTACAACTGCAGTAGCAGCGGCGGCGCCGTTAACCGCGGCGCGCTAGGCCCCTTCGG
CCTCCTCGTCCTCGCCGCCGGTGACCGCCGTGGCGAGCAAACGGCGGTCTACTTCTACGT
GTCTAGGGGCCTTGACGGAGGCCTCCACACCAGCTTCTGCCAAGATGAGTTGAGATCGTC
TCGAGCCAAGGATGTGACCAAGCGTGTCATCGGGAGCACGGTGCCGGTGCTCGACGGTGA
GGCTTTGTCAATGAGGGTGCTCGTGGATCACTCCATCGTGCAGGGCTTCGCCATGGGCGG
GAGGACCACGATGACCTCGCGGGTGTACCCGATGGAGTCGTATCAGGAGGCAAGAGTCTA
CTTGTTCAACAACGCCACCGGTGCCAGCGTCACGGCGGAAAGGCTTGTGGTGCACGAGAT
GGACTCAGCACACAACCAGCTCTCCAATGAGGACGATGGCATGTATCTTCAATCAAGTTC
TTGAATCTCGTCATTAATAAGCTACATTGGATCAAAGAAGATCACCAGGGAAGGGCAAGG
CATACATAAATCAAATCATTCTGCACAACCTCGCTTGCAGCATGCATTGAAACATCTGTA
TTTGGATCATCTTCTTCATTTATGTCATAGTGAACTATATTACTTTGTTGGGCGTAGAAC
CTATATATGTAGTTTGGATGGGTGGAATTTTGTTTGTTTACATAGTGAACCGATCTGGTT
TGCCTAATAAACTTAATTATGTGCTTGTTTACAAAATGAACTATTATTGTTTGGGAAATT
CGACTCGTGTTTGTTTACATAGTGAATGGTTGTTATTTGCATACTGGATTACAATTTTCG
TTTATATAGTGAACTGTTGTAGTTCTGGATTTGAGGGCTTCTTGTTTACATACTGACTTT
TATTTCTCTGGTTTAATATGTGAGATTATGTTTTCTAAAATATAATGAAATGTTCTATTG
CTGTATCTTGTGTCTGTATAACTATAAACAGAAACTCAATTTGTTAAAACATCTTTGCTT
GAAAATATTCCTTTAATAGCATGGTTTGTTAGTGTTTGCTCCCTTCTTTCAACGATACTA
TAGATAGAAGGGCGATGCTCTGTGCCGGCGCGTCGGCCGAAAGATTCGGCCGGCCGCGCG
GGGGGCGTCCGATCTGTCAGTTGTAGGCGGACCGCGTCGTTAGATCTTCATGCAGCATTT
TTTCCTCGATGCAATAAATTTTGGCGCTATGCAGCAATTTTCGTCAACGGTTGCATCAAA
AAAAATTGTAGCAAAAAAATATCTACGTGATCGTAGCAAAAAAAGAAGAAGATGATGCGT
GGTAGCAAAAGTCAAACGCCGGTTGTAGAAAA