Contig Data
morexGenes
Links



Map Locations of contig_53209 (5111 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_53209

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67513 7 2655 bp MLOC_67513.6 Available Available LOC_Os01g73900.1, FRAME:+1, EVALUE:0.0, 13101.m08066 protein DEAD-box ATP-dependent RNA helicase, putative, expressed





CDS Structure of MLOC_67513






Contig Sequence (5111 bp)

>contig_53209 5111 assembly3_WGSMorex_rbca.fasta
GGGTTTTGGTTGGCGTCGCGCGCGTGGGGGGGGGGGGGGGTGGGTGGGTCGGGGCGGTGG
GTGTGAATTGGCGGGGCGCGTTTGCTGCGGCGCGGAATCCGTGCGTTCGCTCGCCGTAGC
CGATGATGGTTTGGGTACTTCCGGCTTGAATGATCGGGGCCGCGCGCCGCGCCCGTCCTG
CTTGCTTGCGTCTGGGGTCTGACCGATGCTTGCTTACTGTTGATGGACGATCCAACAGGG
ACAGGGGTCAGCGGAGGGAGGGATCGATGGCGGATGCGTTCGACATGTACCGGCGGTCGG
TGATCGGCGTGGCCCTGCTGGAGACGCTGAACGAGATGGTCGACTGCGGCAAGCTCAGCC
TCGACCTCGCCATCAACGTCCTCCTGCAGTTCGACAAGGTCCGTCTCCCCTCATTGATCA
CCATCATGTATGTCCTGCACTGCACTCGATGAATTGCTGGGTGGGCGGTGTTTAATTTTG
ATCCTGTGTGCGTGGTCTCTTGTTGTCGTCGTGCTTTGCAGTCCATGTCCCACGCGCTGG
ATAAGCATGTCACGAGCAGGGCCACCTTCAAGGTACCAACCAAATTAACCTACTGTACTG
TATTTCTCTTGTGCTAGCTATATGCTATGCATTCATCTTGGTGTTTCTCATGTACCAAGC
GAATCCTGCTGAAATGCCTTGCTGCTGCTGTTGCTACCTGTCAGTGTCAGTGTACCGACC
TATACCGGTGCACAGCAGATACAGATCTTCTATGTCTTCTGCTTGCTGCCATGACACTTG
TGTGCTATATATACTGATGATGCATATCCAGCTACAGATCTTTTGTGTCTTCTGATTGAT
GATGCTACGTATGACCACTTTTCTGCTTAATTATCAAGTAAATTACTCGGCGTGTCTTGT
TTTCCAACTCGCCACAGGGCCGGCATTGTTCGTTTAGGAGCACATTTGTTCTTCTCCTGG
GAAAATAAACCTGAACTAAAATGTTCTGCGCTCAACAGCCAAATTATGGCACTTGGTTAA
AACTCAATTTCATGATAAGTTAGCACATTCCAGGAGATTTGTTTGCTTTTTCTGGAAAAT
AGAAAATGTAACTATGGGCTCATGTTAATTACTTAGTTTATGCATGAGAGGGTAAACTGT
CTGCAACATGCAAGTGCGTGGATTAATTTCCTGACCTCTTCCTGACTTATATATGGACCT
ACTCGATGATTTCATTCTTAATAACTTGCATATGATAGTTTCTCACAATCATTTCCAACT
AGTATTTGAACTTTTTTGCTGTGGTTTAGAGAACATACTTATGTGCTCCACTGTATTAGT
GTCACAAGCAGAATAGCTCCTTTTTCTGTATTCTAACCAGGAAACAGTTCTGGAGACAAC
ATTCATTTAGTCAGCTTCTGCATGGGCTGGCAACCATCTAGGTGGTGCTCTTTATTTCAG
AAAGCAATGCTCTACATGGCAATAGCTTCACTCAAACAGTTCTGCCTAACTAGTATTTCA
GTCAAATTCACAACATCGTCTAAACAATATTTGCAATCTCTAGTCATGTTTCCATCCATA
CATTGACTTCATTCACACGATTGTTTTTTTCCCTCTTGCCTTGACAGGGCGGCAATCTGC
GCACGTACAGGTACTACGACAGTGTGTGGACTCTCAACCTGAGAAACACGACGTTCAAGA
ACGAGGAGATCGAAGTCGTCCTCCCCAAGGTGATGATCGTGGCCTGTGATATGAGACTGA
TTGCCGAGCCTGAAGAACCTATTACTTGCCAGCAGTGCCAGTAGTCCAGCACCTTTAATC
ATACTCCCCTTCATGATAGACCAGGCGCCACCCCAAACTAGACGGTCATCAGTATCGCTT
ATGGAATGATCCCCAGGAGCATCTAGGCGGCTTCCATTGTGCCAGAACATAATTGCTGTG
AATTTGTTAGCGTTTGCATCGCTTATGGAAGGATGATCTCGCCCTTTCGTGCCGATGACA
TATCTTGTGGATGAGTGGAACTAGGAATATAATGTGGATGAATGGAACTATGAATAGAAT
GTGTGTGATTTTGTCTAACTATATCCATTGTGTGTTTGTGGATGAGTAGAATTAGGAACT
GAATGCGGTTGAATTTGACAAGCTTATCAAGATTCACGGCCGTTAGCACCTCTACATACA
AAAACCTCTGGTCCAGATAAAACATGGAGGAAGAAACTATTTACAGGTTGAAAGTGAACA
TGGACTCCAAGGGCAGCCGTTGAGAGTGGAACTTGAGCTCGTTCTGGAACCTCTGTAGCA
CGAAGTGCTCCTCCTCCGTTATGAGTGTCGTCACGCTGCACTCTGACTTGGAGAACGGTT
CTCTCCCGGTTCTTCCGGCACGGTGGAGGTAGTCGGTCGCCGTCTTAGGAAGGTCGAAGT
TGTATATGTGGCTGGTCTGCGGAAGGTCAAACCCTCTGCTCGCTATGTCAGTAGAAACCA
GCAGGAAACCTTTTCCCTTGACTTCCTGCAGCCATACGGTAAATTGATGCACGGGTCTTG
AATCAATATATTCAAAATGCTGGGGGTCTAGACAAATAATTGAATGGGAGCACTTACAGT
GAATGAGGTGGCCCGAGCATTGAAGTTCATATCTTCTTCTAGTACAAGCACCTCTAGGGT
GCCTTTGTATTCTGTCCTCAGGAACTCGACAACAAGTGTAGACGACGGAGGATTTCCAGC
CCTTTTTGATTTCTCAGACTAAAAACAATAGGTTGCAATGGTTATAAAAAAAGAATAGGT
TCTCAGACTACTACTAGTCTACCATGATTTTAGTCAAGACTCATTTACTATCAGCATGAG
TTCTAAGAACTGGGCAACACAGCAACTATAAACTAACCCAGAATTGCCACTTATATGAAT
ATAGAAGTTTTCCGAATGGGACTAATTTAAGAAACTGAAACAGGGCACTGATCATAGAAC
CACGCCACTACCAGAGCAGAAACTGAAACGATGATGGATCTCTCTATGATAGTTCATAAG
TTAGCACCTTGGAAAACAGGTGAAAGGGTATCCCATGGTACAAGAGCTATTTTATAATTG
ACATGGCATGGCATAAAATGAATTAATTTATACCATTACCTGTTGAGCGACAAATATAAT
CACTGACTTTGGTGCATCCCTCTCAAGCAAGGATAGCAAAACATGCAACCGTTCCTTCTT
GCTGCAGATCTGTACATTGATTATGTTCTCATAAGGATTGAGAATCAGAATGAGGTCAAA
AAAGAACTTTCAGGAGTAAGGAGATTGGTTGCGCTTGTGCACTTAGTTGATCAGAAGACA
CTAGCTGTGGAAGGAAAGTCCATAGAGGATAAGAGAAGGTCTGTCATGCCATGTAAAACG
ACTAAATTTTCTAGTAAGTGCCTAAGGTTGTGGGAGGAAAGGAGGAGCAAATTCAAATGC
ATCGTGCACGAAGTGAACTCAAAGAGGAAGTGGTCAATCAAAAGATATATGCTCACCACA
TATGTGTGATGTAGGTGTGAAGGCATGGGTTGTACAGGGTTGACATGAACATGAACCACA
TCGCTCTGCACAAAGGTAAGACACACATGTGAAAACAAATATCTGTATCCATCTGAAGTT
CAGAAGGCACAGCCATTCAGGCAGTAATTAGAATGCATATTCAAGGCGTGTAGACAAACA
ATCGCGGTAGACCACAACCGGAGAATGGATGTCAGATCAACCTTGGTCCATTTATGTTGC
ACGCAGTCATGCACAAAGCGATTGTGCTGAGGTATGGATGCGCTAGCAAATATGGTCTGA
CGGCTGGAAGCTGCTGTGTAAGAATTTAATATTTTGCGGAGGGAGTTCACTTGCTTTGTC
GATCCAAAAATGAAATCAACCTGACAAAACAACAAAGGTTTTTACATTAGCTAATCTCTT
TCCAAACGAATAAGCATGGCGACTTAGAAGATATGTAGAAACTGCATAGGTAAATTTGGT
TTGCGGCTGAAGAACGGAGTGGCCACCTCATCAATAACTAATATTTTGATTGATCCAAGA
CTGAAAGCACGCTTCTCAACCATCTGGCACAAGCTTGCAACGGTTGCTACAATTATCGCA
GGGGGCTCTGCCTGAAAACAGGCCGACGTTGTTAGCAGGTTGTCAGCACAAAATAGACAA
AAGAAATGCAGAGTACATTATATAACATTACAACAGCACTCTTCATATGCCGATTTTCCT
TCCTAAGTAACTATGAGATATAATCATACAAACGTGAAAGGATCTTAAACCCTATTGACA
TGAGACTAGATGTAAAAATGTTTCTGCAAGTAGGCACGCATCGGCATCGACACAGAAATC
CACCAAGGGGTGATCACTTGCCTTTAACCAGCTCTTTTGCCTCGTCAGCATCCCGCCGTC
GAGCAAGGCCATGACGTTGCAAGTCTTGGCCGCGAGAAGCCTGGCGACCTTGGTAACCTT
GCGGGTGACGGCGTACATACAGCAACAGCAACCAGGGCAGTCAGACCTCTTGCCAGGCAC
AGCAGAGCAAAGCATCAGCTACAAACAAACAACCTCACCTGGATGCCGAGCTCCCGCGTC
GGCACGATGACCAGCGCCTGCACCGAGGACCGTCCGACGTCGATCGCCGCGAAGACCGCT
AGGAGGTAGGCCAGCGTCTTCCCTGAACCTGTCTGCATCCAACCCACACAGTTGTACACT
GAGAATCACACTGTCATTCTGCAGTACAAATGTCGAGAAGAAATGGACGGAGGTCGAGGG
CGGCGGCGGCGAGCGGGCACCTGGGCGTGGAGGATGCAGTCTTGGCCGGAGAGGAGCACC
GGCAGGGACTGCTCCTGCACCTCGGTGGGTGAGACGTACCCAACATCCTCAGCCCTGCAA
AATACTGAACTTTCAATGAGAAATCGACACCAGATGCAGGGAGGGGGAGGAAGGATGGGA
GGTGTGGGGGTGGGGTTACCTCTGGAGGACGTGGTCGGGGACGCGGCCGGAGCAGACCTC
CCGGAGGGTGGCGGCCGCGGTGGTGCGAAGCGGGCGGGGGCGTGGGCGTGACGCGAATGG
GGCCAGGCTAGCGGCGCGGGGGCTGGAGCTTAGGGGGCTGGGGAGCGGACGGGCGCGGGC
GGGGGGGGGCG