Map Locations of contig_53181 (4819 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_53181

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67499 1 1636 bp None Available Available None





CDS Structure of MLOC_67499






Contig Sequence (4819 bp)

>contig_53181 4819 assembly3_WGSMorex_rbca.fasta
CGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTC
ACCAAGTTCACCTCCTCTTAGATCGCGTTGCCTGTATCTAGGAGTAGTAGCGACCGTAGC
TGGTTCTTTCACTTTAGTGCCTGTCAACCATGGTTACCTGGAAGTAGTAGTGCTGGATGG
GAATTGCTGAATGATTGCCAATGCTCTGTTGGCTCTTCAGTTATAACAACTGAATTTGTG
CTTCTTCTGGTGAACTTATAATTCAGAAGTAGCGATCCATTTCAGCTGTGATTACTAATC
TCTGTCACACGACTGTGTTTAAGTTTTTAGATTGATGAACGCTGATAGTAAATTACGTTT
ATGCAATTAGGTACAGAACGGACTGTATTGTTGAATCTGTTAGATTTAGCTGAGTACCCT
GAACTTTGCTGCTGGGATGATCAATAAGGTGAAGAGCAACCCCAATGTCCACTTGTTGTT
TTAGTAGTAGTAACTTGCATGAGTCAATTGGTTGTAAGAACTGAATAATGTGCTCTGCAG
TTTTTTGGCAAACCAAAATCTAGAATGTTAGTAGTGTTCTGTAGTACCCCTTTTAACTGA
ACTTTGCCACGTTTGTCCATTCGCAGTTTGATGTTCTTCTGCTGTTGGGGAGTTTCTATT
GCAGTGTTTGACTCCGATTATCCGCAACTAGTTGTACCATTGTTAGTGATTTCAAGTGCT
TTTTGCTAATCTCTGCCACGTGATTGTGCTTTTGCAGCAGTATAAGTTTCCAGAATCCTA
ATATTCTGCATTAGGTGCAGAACCCAGTGTTGTCAAACCACCCGGGATGTGATTATCGTT
AATAAGAGCAACTCAATGCCTTGCCATGTCTGGTTCTTGCTTTGGTAGTAGTAGTAGTAG
TTTGCTTTGCTTATCCAGTAGTATCAGTCATTGATTGCTCAGCCTGGAGCAGCTTGGTGA
TGTACATGATGGTGTTACTCACCTGCTGGTATCGTGTACTCATCTTCATTTAAATTCAAG
GAATTGATAAATTTTTCGACTCTCCATGGTGGTATTATGTAAACTTTTGCACAGCGTGGA
GAAAGAAGTGCACATCTACAGCTTATGGAACTACCTGTTCTCATCCTGCTCTTAAGATAC
TGCAGCAATTCAGTGATCGTTGATGAACTCAATGACTGGCTGGTGAGTACTTCATTTTTT
CCATTGAATACTTTCTTAATTTTGGTGGTCTGATATTTATTCCCAGAGGCATATGGAGGC
CACCCTGAAACCACCAAGAAAGGCCGGCTCCTGTTTTCGTTCATTTACCGATCAACAGTA
TAAGCTCGTATTTCTGTTCGTCGGAGATATATCAAGATATATCAAGACTTGGTGGTCTGA
TATTTATTCCCAGAGGCATATGGAGGCCATCCTGAAACCACCAAGAAAGGCTGGCTCCTG
ATTTTTTTATTTTTTTAAACGGAGGCAAAAGCTTTGTCTCATCTCATTAATAAAGAAGAA
GAGAATTACCCGGTTGATTAACTCCTGTTTCCATCATTTACCGATGAACAGTCTAAGCTC
ATACGTGGGAGCACTGATTTCACTCTTACAAACTGCTACATATTTCTGTGGGTCGGAGAT
ATATCAAGGCTGCACAGGCAATGTTTTGAGTTCAATGCCACTTTTTTACTCCATATCATA
CGACACACAATGGTAAATTTTCTTCATCTAGGTGGACGATATAAACGTCTACAAGAACGA
AACAAGAAAATTACAACAAGGGCTGACAATGAATAACAAATTAACATCAGCGTGAATAAT
TCAGTTATTTTTTCTGGAGAATCTAAAAACTGAGATCGATGCATTGTACAGACTATGATG
CCTACTCGTCCAGAAGGAACAAGAGAAAAATCTACCACCTGTTACACCATGTATTAGCAA
CATTCTAATTAATCTCAGAAGATACCACTTACCATAAGGTCAATGGGAGGGAAAGAATCT
TTACAAACATGTTCTTGAGCAGTCATTGCTTCTAGAATCCTAGCATTGAAATTAGATTCT
GGTGATAGGTTGCATCCTGCAGGCCACAATTAATTTGGAACAACTACTTCATATGTGTTG
ATTATTTGTCCCGCTGTCGTTTTTGTCCTTCTCCATAGTTCTCGAGTCGACCAAATTGTA
GTATGTATAGAAGGACAAACTGATCAAGACCTGTGATTAGTTCATCATCTCTAAAATTTC
AGGAGAACTGGTATTATATAGTATTATAAAACATTAAGAAATGCAAATTAAATGTGAGAT
GTTCTATTCGTAACATTAGTTTGTACACAGCTTGGCATCATTATCCAATGGTCATACGAT
CACCGTGAGTCTAACAGAAGTATTCAGATAACTACTTTTAAGAATAGTTATGCAACTCAA
CTAAAATTCTAAAATTTAAAAAGAATCAGCAAAAGCTAAACTGTTTTTTCAGCATTCCAG
AGCGGATGTAGCATTGTTCAGAAGACGTAATCATCTGCACAAAAATCTAGTTTAACATGA
GGTTATTAGCATTGCTATCAAATACTGATGTAAAGGGGCTGAACTAGTACATCTAGAAGA
AAAATTGCATCATATACTAGGATCCTAATACCCTGTATAGACATTCAGATTCTAAACGTC
TGACCATTATCAACCAATCGGCGACTAAACACAGCCCGTAGAGCAGTCTAGGTGGAAGAT
GTGATTTTCATTATATCAGACATGATCCTCCTCAATGTTGTTTGCATCTACTCACTCTGA
AACTATGGGTGCAAGCAACCAAATAACAGGTTGAAAATGAGCAGTTATGCGAGCACTAAG
AGCAACTCCAACCCGCCGACCCATTTCGTCCGTGTGTGTTCGTTTGGGTCACGGCGTACA
GAAAAGTTGTCTCAACGCCCCGATCGAAACGGACGCGTGTCCGCTTTTCGTCCGTCTGCC
CACCCATTCCTGGCCCATTTTTGAGCTTGATTTGCGTCAGCGCGAACACGAGACGGACGC
GCACGCTGCGCGCCAACTACTCCCCCTAGCCCGCCAGTCGGTGGCAAAGCCTCCACCATT
TCCCTCCACTTTCCCAAAACCCTCCCGCCCATGCGCTCCCCGGCCGCTCGCTATGGACGA
CGACCTCGATGCCGCCGCTGGCCTCGCCTCCCTTGCCTCGTCCGACATCACGACCGCCCC
CTCCCGCAATGGCAAGCCTCGCCCCCCTCAAAAAATCGCCACCGCACCCAAGAAGAAGAA
GGAGCTGACGCGTGAGGAGCGGGCTTGGGAGTCGGCGAAGGGAAAGGGCCGGAGGCACGC
GTCGGGTGCAAGGGACGAAGTAGCGTCCTCCGCGACCATAGCCGCCACAACGCGGCGGGA
GGATACCGTTGCACGCGTTGAGGCGGCAACAAGGGAGGTACTTTTGTTCCTATGGTTAAA
ACCTCGCCAGCACGGGCTCCTCAACGCCGCCGTGGCCGCGGCCAGCACATGCTCGTCTGC
CTTACCTTGGATGGCGCTACCATAGTCGCCCCGCGCATCGACAACTCATCCGATCCCCGG
CTTCCACGTCTACCCCCAAGCCTCCCGCCTCTCCGGCGAACGCTCGCCGGTGGTGAGCGC
GATGGCGCCATCCATGCCCGCACCCGCGCACATCGACCTCAACGCCACACCAGTTGCCGG
TGGCTTATTATCCGATGGGACGAGGAAACACACGCGGGAGATGTCGGCCGACATGCTCTC
CAGCGCCCGTAACCTGTTCGACAGAATGCTAGTAGCCATCGACGATGAGAGGGCCAACCA
CTTCATACCATTGTCGAGGAAATCGTTACCTGGTAGCTGCTCGGTTGGCTGGCGAGTAGG
GGATTAATAGGCTACTTGGCGAGTTAATAGGCCATTTATTCAATTAATCACCTGATTTAT
GAGTTAATCGGCAATTCGGTGACCCAACGAGTAGGGATTAATCGGCAAGTTAACTGGTTA
ATCAGACAAATTCTTGAACATGGCTTCATACAAAGCATCATCTTCAAGGGTGCTCCGGCA
GTCGCACGTGGTGCTGGCTATGATCTCGATGAGACCCAAAGCCAGGATAGCCGAGGCGAA
CCGTTCACACCATCGACCTATGACCAAGCTGGCATGCAGCCCACCTTCGTGCAAGATCAG
GTCGGCCTGGACCTGGACGGCTTCCCACTCGACCACGTGTTTTCGAATGACTACGGCCTC
GAGGAAGAGGATGAGGTGGACATCGACGGAGAGCCTTTGTTCGAGGATGAGCTCGCCACC
CAAGTCATCAGGGTACAACCCTAGCGAAATAGCAGACAGACAAAGACATACACGGCAGCC
GAGGACAAGCTCCTCTATGAGTGTTGGAGGAACATTGGGCAAGACCCCAAGGTCGGCGCC
GATCAAAAGGCATCAACATTTTGGATTCATGTCCATCGTGAGTTTCACGAACGCAAGAAG
TTTCCTTCGTACCAAATGGAAAGCATGCGTGGGTGGGTGTCCATTAAGCGATGGAAGGTG
ATCTAACAACAATGCAACAAGTTTTGTGCCACTTATGAGAGCATCAAGGCATGCCCCGTG
AGCGGCATCGACATACAAGACATGGCATGCATGCATACCCCCCCTCTTTGTTTGCATGTT
CATTTGCTAATATGTTTATGTGTGATTCATTTGTAGGCATTCCAAGCTTTAGAGGCATTC
AAGGTCCAACATCAAGGCAAGTCCTTCAACCTTTCTCATTGTTGGAGGATCATCAAAGAT
GAGGAGAAGTTCAAGCTCCAATATGTCGCCCTCACAGCGAGGGGGGGGGGGGGAAGCCGG
GGGGGTGGGGGGGGGGGGG