| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_53177
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_67496 |
1 |
2155 bp |
MLOC_67496.1 |
Available |
Available |
LOC_Os05g46270.1, FRAME:-1, EVALUE:9e-53, 13105.m04933 protein FEN1A - Putative flap endonuclease protein, expressed |
| MLOC_67497 |
3 |
2473 bp |
MLOC_67497.2 |
Available |
Available |
LOC_Os05g46290.1, FRAME:-1, EVALUE:0.0, 13105.m04935 protein T-complex protein, putative, expressed |
| MLOC_67495 |
3 |
1206 bp |
MLOC_67495.1 |
Available |
Available |
LOC_Os05g46280.1, FRAME:+2, EVALUE:3e-57, 13105.m04934 protein expressed protein |
CDS Structure of MLOC_67496
CDS Structure of MLOC_67497
CDS Structure of MLOC_67495
Contig Sequence (8916 bp)
>contig_53177 8916 assembly3_WGSMorex_rbca.fasta
TGCAAGATCGTGGATTTGGTAGGACAACGTCTACAACCATGTTGAAGTTGCAATGTGTTC
GCTCTCTCCTCCGCAAAAATAAATAAATGTGTTCACTCTCTTCTGTTATGCTATAGAACT
GGAAGAATTGGTTCGGCAGAGAAATTAATATAAAGGCCATGGTTTTGAACTGGAGTCGTA
TGCATTTATAATCTATGTTTTTATAAGAGCGTTATTCTCATATTAGGCTTGTAGTGTATT
TGTTTATTTGGGATAGGTCTCACAAAAGTGACATTTGTTTATTCTATCTTTTGAAAAGCT
GCTAGTCTCACATGTGGATATAATTGCATTTGTTTATTTGTGTGGTCCCACAAGTGAACT
CACCACCAACTCTACTCTAACCTTTATAAGTAGGAAAGAAAAGTAATGTTGGGAAACATA
TAAAGTGAGCTAGAAAACAACCAAAGGATAAATAACCTTTTTAAAAGCTCGTCCTTCTTC
ATTTCAGGAGGCTTGCCATCAAAAACATATCTGCATGAGCAATGTTGTGATCCCATTAGA
AATAAATTTATATTTCAGATGTAATTATATGGAAGATTTCTGGTATTAAAAAGAAAGAAT
TTGGATTTACACTGGTTTAATTCCTGCCTCGAGCAACCTTATTGTCCGGCTGAACATGCC
TTGCAAATGACTGTCCAAGAAAAAGAAAGACCGCATGAACATACATACTAGGACTATAAA
CTCTGTGCAGTACTTCAAATGATATTAAGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGA
GAGAGAGAGAGAGAGAGAGAAATCTGAACCTGGTGACATCACCGGCTTCGTTTGTAAGGG
TTTCCATCCCTGTCCTTCCAACTACAATCTGTAGAAGGGAAAGCATAAGAAACATATCCC
ACCTTTCATCGCAGTGGATAAAAAAGGTTTGCTATTATCTCGAACTGCTTGTTAACAATC
ACACAGAAGACAGTTCATCAGTGCAATTTCAAAGTTTTCCTTCCTTTATGTTGTAAATAA
GAGAAAACATCCAATGCTAGAGGCAATCAGCTCATTGTTAATCAATCAACCCAGCTAAAC
TAAGAACACACAACTTATATGCCCAAGGGGTGGGCGAACATTTGGCAGCCTACTGCAACA
ACCTTCTATACATCCAAGAGTATAGAATGGGAAAATATTCCAGCACCAGGCGACCAGTAT
GACAAATCTATCACCACGCGAGGGTTTACAAAACCCTAAACCCAACCTAAGAGAGCAGAT
CTTCTAGGCCGAATCGCGGAATGCGCGTGGAGCCAGCGACCATCCGCATATAGAGATGGG
TTCCTAATCACTGTCGCGCAAGCACAATACTGGAACAAACAGTAAATGGAGGAGAGGCCA
TGCGGTTCAGGGGAGAATGGAATGGAGGGGCATTACAAGGAACTGGTAGATGCTCATGCT
GGCGTCGACGGCGATGCGGCGGCCGAAGTAGCTCTCGAACTTCTGCTCCCTCATCGACTT
GGGCGCGTTGTCCGCCAGCAGCTTCGTCAAACCCTACGGCCACGCAAAAAACAAAATGAA
TCGCCTCTTCAATCGAATGCGACGGGGAATAAAGCGTCCCCGAATACGCCGCCGAACAAA
TCCACAGGGTGCGAGGGGCAGAAGGCCTCTCACGGCGCGCTCACCTTGACTCCCATCTCG
CCGGCGACGGTGGCAGGCGGCGCGCGAGGGCGGCGGGGGCGGGGAGAGGCGGAGAAGAGG
GAGGCCGCGGGCTATTTTCAGTTTTTTTTTTTCCTTTTCCTTTCCGCCCCCCGGTCTTTG
TATTCTGTTCTGGGAGCGCCGTGGTACAAATGGGCCGGGCCGGACGGGCAAGCTCAAGTC
GGACAGGAAAGCGTCCAGGCCCAGCGGAGCGACCCTGGTCTCGAACCGCAGCCACACCAC
GTCGCCGCCGGCCGCCGGGGAGGTCGCAGCGAGCGCGAGCGTGTGGGAGGGGGGGAGATG
GCGAGCCGGCTGTGGAGGTGGTACGCGGACCGGCAGTTCAACAAGTGGGAGAAGACGGTG
CTGTGGGACATGCTGGAGCCCTACCGCCCGCCGCGCTCCTTCGCGCCGCTCGTCGGCACC
TACGTCGCCGCCTTCTACACCGCCGTCGTCGCCGCCGCCGTCACCGAGCAGCTCTACAAG
GTAAGGACACCCGCCCCGGGCCCACGCCGGTACCCCCTCGGACCCCGCTGCCCCCCTTCC
CTGCCTGCGATCTCGCTCGCGCCGTAGATGCTCGACGAAATGCCTCCTTGCTGCTCATGA
TAGCACGGCTCGCATCATAAACTTGTCCAGCTCCTACCTGCCATGGCATCGTTTGCATTC
TTTACTGGCCGGATTCCGCTGATCATCGCTCCCGTGTAACCAGTACTGCGTGTAATAACG
TTGACACAATGAATGTTTCCCACGGTGATGTGTGGCTTCAAACTTAGGCTGAAAAAAGAT
GAATTCATTTGAAGATCGGAAGATCACGATTATGATACTGCATTGGAGAGGCTAGATTTG
TCTTGTGCTTAAATCGCCTCTGGAGTTCACCTGATTGTGTGTTTTGTGTTTTTGGAACAG
GAGAAGTACTGGGAGGATCACCCGGGCGAGGCGGTGCCGATCATGCCGCCCATGTTCTAC
TGGGGGCCATGGAGGGTGGTGAACGGCGAGGTTCCCCGCTTCATCCAGACGCCCGAGGAA
GCTAAGCCGGCATAGGAACTGCTTGGAGATCGGCGGGGATCATGTGAGATGTTTGATGTT
CTCCTTTTTCTTGAAGATTACTTACTCTCTGCTGTGTAGCTATTGCATTACGGCATCACT
TGTAATTTACATTCTGGTGATTGGGCAGGGCCGTGAATCATGATGGTGGGTTATGTATGC
TTCTTTGCATGAATAAGTACATACGTTGCTTCTCTTGATCGGATGTCTATCAAAGGTTAT
TTGCCGTCTGTGTAGGCTTGTAGCTATGGCATTGCTGCATCTCTTGTAATTTACATTCTG
GTGATTGGGCAGCGTCGTGAATCATACTGGTCTTTTATGTATGATTGTTTGCAAGAATAA
ATTGGTGAATCATACTGGTCTTTTATGTATGATTGTTGTGAATCATACTGGTCTTTTATG
TATGATTGTTTGCACAAATGAATTGGTCGGTGGCACTTCTATCATGGAGCAGATTGCTTG
CATTTTGTTGATTTGATGATCTTCAAAGCGAAATAGATTGGGGTGGGCTTCACCCATTTT
GGCAAAGGTTCCAGTCATTGCCAGCTTAACAGTTCTCTTGTTCTTAAATAGTACTAACTC
CGTAAACAAATATAAGAGTGTTTAGGTTACTACTTTAGTGATCTAAACGCTCTTATATTT
CTTTACAAGGTTGCCAACGCTCACTGGACAAGGTTGAGATGGTGATCAACACTACAAGCA
TGTAGCGTGCAGCCAACGATAGGCAATGTCTTGAGGCCACCATGAAAACGCAAATTGCAC
TCATCAAAAGAAGCACCTCAATAACACCAGACGTTGCCCAGTTAACATTCAAAGCCAAGA
TAATGCTTGTCTTGTCTGAGCCTACTCGAATTTCGACCCAAAATGAAAGGGCTCTAAATC
TAGTTAAGGTTACATCAGCACTGAACCGTGAGTTTTTCGAAAACCAAAATAGGTGCCAGC
TTTGCACCTCTCATCTCACTTGATAGGGAGGGGAATTTCCATTCATGTATAGGCCGGGGA
AGTTACGTTTCTCATGTCTTTAACCAAAAACAGGTAAATGAGACAGCATGCCGCACTGTC
CTCAGAAGCCCATTCCGCTCATGTCCGGCATTCGACTGGCGATTCTGGCCTTTGTCGACG
GGAGCTCAGCGACTGCGGCCTCTGTGGTTGTCATCAGCAGAGAAACGCTGTACCGTAAAG
ACAGATTGTGAGACAAGCTTGATTGTTTCTGTCATGGTTGTACAGAAGTAAATGGTCAGC
TAACTTGAGCCGTACCTTGCCGCATCTTGAAGTGCAGTTCGGATCACCTTCACAGGGTCG
ATGATACCAGCCTTGATCATGTCAACATACTCCCCTACAGTAGGCAAAAATCCAGGAATT
AACTATGAGCCTCTAGAGATTATTATTCTGCTGGAGGAAATGTTAAGATTGCCATTTTTA
CTGCAATTAAGAATCGACAGCTGAAATACGGTTAATTTCCACAGACCTTTTGCTGCATCA
TAGCCCAAACTAAGATTGTCTTGTTCCAGTAGCTTCCCAATAACTATAGCACCATCAACA
CCAGCATTTGCAGCTATGGTCATCAGGGGGGCCTGCAGAAATTACGGAACAATTAATGTG
TGTCCAATAAACAGATATGGAATAATCAAATGATGAAGTGCGGAAGAGGATCATTATCAG
CACAAGAAGTAACCTTCAAAGCATTCTTGATAATTTGAACTCCAATCCTTTCATCCTCAT
GCGACGTGCTAATCTGGTCGAGCTCCTTGGCGGCATATAATAGGGCAACTCCACCACCTG
TTAGGCGTAACATGAATTGGAGAACACATACAACATATAATCATGTTGCAAAAACAAAGT
GACAAGAAATAGCAGAGAAATATCATATAAGCTGATCAAGAAAAATGTGATTACCTGGAA
CAATACCCTCCTCCACAGCAGCCCTTGCAGCATTTAGAGCATCTGTTACCCTGTCTTTTT
TCTCACCAACTTCAGCTTCACTAGCTCCACCAATCTGCAAAAATAGATGTGTATGCTGAG
ACGAGCACAGAAAACAAGGGACATCACACCATTCTTAGAAACCAACAAACCTTGAGAACA
GCAACGCCTCCAGATAACTTTGATAAACGCTCTTGAGCCTTTTCTTTGTCGAACATGGCG
GTGTTGTTCTCGAGTGATTCTCGAAGCTGTGAAGGGCATCCACATGACAAAAATTGTAAC
TTGTACAGAATGAGCTACCTGAACCAGTATCCAGATAGCTTAACTGGAGACGAGTCAAAT
GTGATGATTCTTAGAGTACCTGCTGACACCTCTCTTCTATCTGTTGCCTTTCACCTCCAC
CATCTAGAATGATAGTATCATCAAGAGATACAGTAACCTGTGAAGAAAATGTCACTGTAT
GGTTCTTTTTCTTCAAATTAATGTTATTATATTGCTCTCGAGTGTAACAATTTATGGAAG
TTGACAAACCTTCTTAGCTGTGCCGAGCATTTGTAGTTCAACTTTATCAAGATCAAGACC
TTGTTCCTCGCTAATAACCTTGACATTAAAATGAAATATCAAGTCAGATTCATTCATAGT
AATGTCAGTCCTGTTAACCAACTTGATTATTCTCATAACAACTAACCTGCCCTCCTGTTA
AAATAGCCATATCATCCAGATTTGCCCTTCTGTTTTCACCAAATCCAGGAGCTTTGACAG
CACATATCTACAGCCAAGGCCTCAAAATTAGTTCAGAATTTTGCTTAAATAAGCTTCTCT
GGGATAACAATCCAGAGTAGCTTGAGCCTAGTGAAGGAAATAGACACCGTAGATAAAGGA
AAAACAAACTGGAAAGGCTTAATTCAATGCCAAGAGTGCGCATTGCCAACCAGCTTATAC
AAGCATGGAAGTATGACAGAAGTAGGAACTGAAGAAAATATTCATAATACCTTGAGTCCA
GCACGATGCTTGTTCAGTACAAGCATTGATAGAGCTTCTCCTTCTACATCCTCAGCAAAA
ATGAGAAGGGGTCTGTTGTTCTACATAGATCAATCATGATTTATCAGTTGCCACCAAATT
TCCATCATGGGATCAACAAAAGCGAGCACCGAACTTAATGGAACACAGTTACCTGGATGG
AAATTTGCAATGCTGGAAGAAGTGAATTCATGCTTGAGATTTTCTTGTCGTGAATAAGAA
TCAAAGGATTTTTCAACTCCTGCCCATGAAAAAAAGGATAAATCAGAAACATGGTTTCAG
TTCAGGTCAATCGAAGAAAATCTTCATTGTCTGTTGATATGCATGGTATCCATCTCATCT
TTGTTTTCTATCTGCTCTTATCAAATATTACCTCCATCCCAAATTACTTGTCTGTTGATA
TACATGGTATCCATCTCATCTTTGTTATCTATCTGCTCTTATCAAATATTACATCCGTCC
CAAATTACTTGTCTTAGATTTGTCTATATACGGATGTATCTAACACTAAGACATGTAATT
CGGGGTGGAGGGAGTATTTGATGTGCCTAAAACAATCTCCGCAGACCGATACCAAACAAT
TGTAATTCAAGTTTACACGAGAAAACACAAGCAGCATGCATCATCCTCAAAAGTAGGAGG
TGTAGTAGTCTATTTAAGATTACATTGAAGCAGCTGCAAACGAAGAGGAAACAAACTATA
GCCATTGACTTCTCAAGTACTACTGATAAGTTCCCTCCTACATGCATATTGCCATGGCCC
ATGGAAAAGTTAAAACAGAAGGAGGATTTGAAGAAATCCCTTGCAGACAGTAAACGTGCT
GAATTCGTTGGTATAGCAAAGAAGAAAAGAAAATAAAGACTCACACATTTCTGAGTCTTC
TGATCAGTTACAAAGTAAGGTGATATGTAGCCTCTAGTCAACTTCATTCCCTGGACTGCT
TCAAGCTCATTATCCAACGTTTTGCCATCCTGCTCATTTGTAAGAATTATAATTTGCAGA
ATACCAGATAAACCCAATATAGTTGCAAAAGCAGCTGGTAGGACTCACAGCAATAGTAAT
GACGCCATCCTTTCCAACTATTCCCATAGCTTTTGATATCAGATCTCCAATTTCCTTTTC
GCCATTTGCGGAAATTGTAGCTACCTGATTTACAGCACAAAAATGAGGTGGGTATGCTGG
CCAGATTTCCAATTAAAGTACAAACAATGAATGTTAAGTTACTATGTAGTATGTCTAGTA
CTGAATCATACTGACAGTTTTCGATTACCTGTGGCAGATACAAATAATAACTACATCAAA
GATACATAAGCAACGCGGATATGTTTTACAGATTGAAGAGGGGAAACATAACAGGCCACC
ACAGCAAATGAGAATATCTCACCTGATTTATTTCATCTGGGGAATCAATCATCCATGCTT
TACTTTTAAGGTGAGCAGTGACAGCGCTTATAGCCTTGTTTATGCCATTCCGCAAATCCA
TAACATTGACCCCTGCTGCCACAGCCTTGCATCCTTCCGTGAGAATTGCCTGTGTAAGCA
CAGTTGCACAAGTGGTACCTGTTACCCCACACAATCAGAAACAAAGTAAGCGACATGCAA
CGCTCCATTCACATAAATAGACAAGTAGTTCCCCACGGCCCTACCCTCAAATCTTGATGA
AAGGACAAGGCATTTGCACACAGAAAACAAACATGAGAAGTTCCTACTCTTTATAGCATG
TTGTTTCAGATTAAATACCAGCTATTTCTTATCTCAGGAATTGCAAACGAACGAGCAACA
ATGTTTGAGAACGAATCCCACGTTTTCCTAAAGAATGGTACAGTGAGATTGCATGTCCGA
AAACAAAATAATTTCTTCAAGAATGACTAGGTTAAAGTTAGTTGCTCCATCAGCAGAAAT
CAAATTATGAGAACTAGTGCAGATCACAAAATATGGGAAATTGTTAGTTACTCCATCTGC
ATGAGGAATAAAATACAGCAAGTATCAAATCACAATGTAATCTACGCGACTAGGCCTAAA
CTAGAAGCATGTCAAATCATGTAGAGATCATAGTGATCAGAACTAGTGCACTGGATCTGA
AGGTAGAGCCTGGAGGCACACCACACACGTGAGGCACAAAAATAATACGAACCACAAGCT
ATTGCTATCCATCTGTCATGGGAATACAATGAACTAGCATCAAAATTTAATAGTCCTGGG
GCAGCACAACAATCTGCAACTGCCTAACAAAGGGATAAACTACACATGATAGAGAAGGTA
AGACATCGGCATTAACACTACACTCACTGAAATTGTTTGCATTTAAATAAAAGAGAAAAG
GGGATGCTTTGCTAAAAAGAAAAGAAAAAAAAAAAACAGCTAGTTGAGGTGGTTGATCAA
GTTTGGGAATTTCCAAGAGCCCTTGGTGCTTACCATCTCCTGCGGCCTTGTTAGTGGCAT
CAGCGACCTGCTTCACCAGGCTCGCCCCAACGTTCTTGGCGCTGTCCTCGAACTCTATGC
TCTTGGCAACCGTGACCCCGTCCTTGGTGACCTTGGGGGATCTGTTCGGTCTCTCGATAA
CCACATTGCGGCCCTGCGACACAAGCAAGCGGACCACTCAGCCGACGAATCAAACCCTAT
GAGCTACCTCCAGCGCTTTCCCGCTAGATCCGCGCGATTGCTGCGTCGCACCGGCCAATC
CGCGCTGATCGGGAGTGGGAGGGGGGCACGGACGAAACCTTGGGGCCCATGGTGACCTTG
ACGGCGTCGGCGAGGTCGTTGACGCCCCGCAGCATGGCGGCGCGCGCGCCGACGCCGAAG
GTGACCTCCTTCGCCGCATACCCGCGCGCCCACTGCCGCTGCTCCCCGCCGCCGCCGCCG
CCGCGCGCGAGATGCCTGCGCAGCGCCGAGGAGGAGGACCGCGAAATGGCCGCCGCCGCC
GCCCGGTACATGGCCGCGTGTTCGTGTGTGTGGGGGTTGGGTTTGGCGAGAGTCGAGCTC
GTGTGGCGTCTCGGGGTTCGAGAGACGGGAGGGAGGGTTTATGTGGGTTTGGAGGTTCTG
GAAGCTTCTCGGTCGTACTTCCGCCGGCAGCGAAAGCACCGCGGCGCGGCGTCAGTCTTG
TGGGGGGAGAAGATGCTTTGTGAAATCTGAGCCGTCCGGGATCTAAGATCGTGTGGCCAC
TCGCGCTCCTCGGTTGACGGCTCCGATTATCATTTTCGACAACAGGGCTAGCTTTTTATG
ATTTGTGTATAAACATGGTTATTGGTTTTTATATAG
