| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_53065
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_67420 |
2 |
3012 bp |
MLOC_67420.1 |
Available |
Available |
LOC_Os01g71000.1, FRAME:-3, EVALUE:0.0, 13101.m07730 protein protein kinase APK1B, chloroplast precursor, putative, expressed |
| MLOC_67419 |
2 |
5964 bp |
MLOC_67419.1 |
Available |
Available |
LOC_Os01g71010.1, FRAME:+1, EVALUE:0.0, 13101.m07732 protein lipase precursor, putative, expressed |
CDS Structure of MLOC_67420
CDS Structure of MLOC_67419
Contig Sequence (9806 bp)
>contig_53065 9806 assembly3_WGSMorex_rbca.fasta
TTTTAGCCTCAAGACTAGTTTTAGTCTCTCTTTAGTCAGGGGTGCTTGGAACTTTAGCCT
CTTAAAAAGAATAGTTTTAGTCCCTTGGATCCAAGCACCCTCTTATAACTTTTCCTTTAT
TTAAACTTGGGCCCACAATTTGCACATGGGCACGGGCCCCACCCACAAGGCCACGGCCGA
CCCGGTCAGACAGCGACCCGCCTCCCTCCTTCCCCTCTGATCCGATCTCCACCCGCGACT
AAACCCGGCGATGCTGACCGGAACTCCACAATCCGGATAAGCCCCAGGCCAGGAGGGGCA
GCCCCGTCTTTTCACAAAAGAACCACCAGTGTGTGTGTTCGTACAATCAATCCTACTCCT
AATAATCCCCTATATATAAACACTCTCTCTCGCTAACCAAATCCCCTTCCCTTCCCTTCC
CTTCCCTCTCCTCCCGTGATTTTTAAATTATTAAGCGTCCCTAATTTATTCGTCCCCTTC
CTCGTCTACCACCTGCCACCCAGCAGCTTCCACGGCTCGATTTTCTCCTTTGTTTTTTCA
GCCAGTATACGCAATACGGCAATAAAATTCCGGCGCGAGCTCCGTCGGATTCGCCTCCTC
CTCCGACCCACCGGTTCGCGTCCGGCGATCGCGCGGCGCGGGGATTCGGCGGTGGGCTCG
CCGGCGGATCCGGTTCGGGCCCTCCGGTAAGGCGATTCCGCGCGTCCTGTGCGCTAAGAT
CGGCGGGTTTCAGTTCAGGGCATGGAGCGCCGCGGGTTGCTCAAGGCGGCTCTGCTGGCG
TGCTTGCTCGTCGTCTGCTCCGCCAGAGGTGAGAATGATTAGATTAGCTAATTAGCTTAG
CCCTCCTCCTCTTGTCTCCTGGACGCAATTTGTCATGCACTGTACTCCCTCCGTTGCTAA
ATATAAGTCTTCGTAGAGATTTCACTGGTGGACTACACGGATGTATTTAGATATACTTTA
GAGTATAGATTCAATCATTTTGCTCCGTTAGTGAAATCGCTTAAAAGACTTATATTTAGG
AACGCAGGGAGTACATATTATCGGCACATTTGGAGCACATTTGGAGCTCTTTGTTGAGCT
TATTTACTTGGGAATATGCGTAGAAACTAGAAAACTTCCACCGAGTATCGAAAAATGCAC
AACAAGTTCGTCTCACCAATTACAGCAGCAAATTATAACTTTTTTTTTTGAATGAGAGGG
GTTTCCCCCCTGCCCCATTTTATATTAAAGTGAAGCAACATTGTCTTACATATTCCTCCA
CAACCACTACACAAAGCACTAAGCAAAATAAAGACTAGGCTAAACGCCAACAGTTTGAAA
GTTTTTTCCCAGCATCCACAAGCTGGGAAGAGAATAGCAGCACCGACATAGAAACTCCTA
GAATGCTTTTTATTACAGACCAGACAAGGAAAACGAGAGAAAGATCAGCTACTAGTCTCC
CCCACGGCCTCCCAGCGTCAATCTCCATGCGATCCGAAGCAGCTCCCCACGCCTCCTATT
CACCAACCTGATACATTCCCACAGAAGAACTGCCTGAGCATCGGCGAACAGTATTTTCCA
TTGATTTAGATAAATGTCCAGCTTGGCAAGAATGCATTTTACACTTCTCCAAGATCGGCC
CTGAAAAGCAAAATTCACTCCTTAGCTTCCAAATGCTCCACAAGGAGGCAACAATCATCA
TGTTTAGAACAGCATTAGTCTTAGGACTAACCCCACAACAATGTAATATCATCAAAGCCT
GAAATTCTGGGATGTTAAACACCTCAGAGATAAGTTGCCAAAGCTGTTTAGCAACCACAC
AGTCAAAGAACAAATGTTGCACTGATTCCTCACAGCTACAGAATAGACAACTAGGATCTT
CCACCAGTCTACGTTTTTCAAGGTTATCTCTAGTTAGCACTTTGTTATAAACACATAACC
ATAAAAAAGCATGTATTTTTTGTGGACAAATCACCTTCCAAAGACTATCACCAATGGTAG
ATACCACTCCCCCAAAATTAATTTGCTCATAAAAAGGTTTAACCGAGTAAGTGCCATTTG
ACTCCAGTTTCCGAATAGGAGAATCGGGTTCTCTTGAGAGAGGAGTTTGTTTCACCACCT
CAATCAGATGATCCCAAAGTGCTAAACCTGCATGATCCACACATCTCCGGAATGTCAATC
TTAGGACCACCCCGTCCCAAACTTGAGCCACTGTGCATTCTGTCTGATTACAAATCTCGA
ATAAATTTCAGAATTGAACTTTAAGGGAACAGTCCCCAGCCCAAACATCATGCCAGAAGC
TAATCGATTCCCCATTTCCCAGTTTCCATTTATAAAAGATTTTTGCTCCAGATAGATCCC
AGGTGATGCTCTTCCAAAAGGTTGAGCCGCTCCCACCACAGCTCCAAAAAATATTTGGAG
AGTTCACATTATACTTGTGACTGATATTTTTTTTCCAATCTCTAAGCGAATCGTCCATAA
AGCGCTTCCCCCATGAAGCCGACAAAGCCATGTTAAACTCCTTTATGTTAGGGATCCCTA
ACCCAGCAAATTATAACTAGAGACATGAAGCTGAAAATGACCGTGTCAGCAAAGTTAAAA
TACATGTATCACCGGTGCGTTCACATTCAAAATGCCTGGCCTAGTCTTGTAGAATGGTCA
GATTCAGAACCAACCTTTTTTTTGCTCCTATATATAAGACGGTTCAGCTTAACTTCACAA
AGGTAACAGTAAATTTCAGACCCCGTGAAACAGAGCAAAAGGCTGTTACAACGATACTAT
GCACTGCATTTAATTCTGAGTTATAGTTTAACATATCCTTATCAGCTTTGATTTTACAAG
CTCTACTGTTGCAAACTACTACTCTGTATGCCTATTCACCTTTGCCATGTTACATGAATC
TTTTCTCCATGTATCCAGCATTATCCATGTTGCTCTTGATGCTCATGTTTTTAAGTTTCT
GGTACAGTACCTACAGTTATACAACAGCCATCCGCTACCATATACAACTCAACCCTTGCC
AAGATACTAGTGGAATATGCTGCTGCCGTAAGTCCATTCGCCATTCTTATCCTGGTTATT
CTGAATATTAGCTCGACATTCAGTATTAGATTAGTTTGTCAAATTCTTTCTGCTATCTCG
GGAAGTCCCTGCAAAAGTATACTTTGCTAGTTAAGCTTCTACCATTTGTTTCTGCAAATT
CGGGGCTAAGCTTGGTGATGTCTTGCAGATCTACACTGCTGATTTGACACAATTGTTTAC
CTGGACATGTGATAGATGTGGTGACCTGATCGCGGTAAGGCTTCTTACCTCTCACACGCT
TTCTGTTTGCTGTGACACCAAAACGACTATCCAACTTTATACAACACTGGTATGGATGAT
GAAATAACTTGTTGGATGACCCAGGGGTTTGAGATGATGGACATCATCGTAGATGTGGAG
AACTGCTTAGAGGTTCATCCCTACTTGCCTTCAGTCTGTTTATCTCTATATTTCTACCGC
CTGCTAAGTGCCTAGGTTGATCATTTTTTTTTTCATTATGAACAAGCAGGCATATGTTGG
TTTTGCCAGTGATATTAATGCTGTCATCGTTGTGTTTAGAGGAACTCAAGAAAACAGGTA
ACTAGTGTGCACCTTGTTTTCTATGGTTGTAAAAATAATAATTTATGTTTTGATTCAGAT
GTTTATCACTAGGAAGAGGCAGATTTTATTTATTTCGATTTCACTCTTGTGTAAGAATTT
ATAAACCTTGACCTGTTTGTTCCTTTAGTTTGCATATTTTTCTCCATATGCATGTAATAG
TCATTTAAAAGGCTGTCAATATCCTTTATAACTCCTCAACCATATTCATCCTCCAATTTA
TCAGCATCCAGAACTGGATAGAGGACTTGCTATGGAAACAACTTGATCTTGATTACCCTG
GCATGCCAGAAGCGATGGTGAGCATTTTGCTAAAACATATAGTTAATGCAATTGTGTCGA
ACCAAAATCTGTAGTAATGCTTGATTCGTGTAGGTACACCGAGGATTTTACTCTGCTTAT
CACAACACAACCATACGCGATGGAATTGTCAGCGGTATTCAGAAGACTCGGAAATTGCAT
GGAGATGTTCCAATCATGGTCACAGGGCATTCAATGGGGGCAGCTATGGCTTCATTTTGT
GCACTTGATCTTGTTGTGAGTACTGACCTGCCCTGGTCTTAAATACATTAACATTGAGCT
TCCCCTGTTACATTATATTGCATAGAAAATAGGTTTCCCCAACTCAACCTGCTAAATTTT
CTCATTGCGAGTTATATGGACCTGTTGCATACTTTACCCGATGATTGTTTTCAGTCTATG
CATACTTCTAAATGTCTGAGCAGTTAGTTATTTGCCACTTCTTTCCTGATGGTTTGACTT
CCACAGCTAATCGGGGAATGTTTGTTCTGTTTTAGGTGAACTACGGGTTAGATGATGTAA
AGCTGATGACATTTGGGCAACCTCGCGTCGGCAATGCTGCTTTTGCTTCTTACTTCAAGA
GATACTTGCCTCATGCCATTCGAGTTACTCACGCAAATGATATCGTCCCTCACCTGCCAC
CGTACTTCTCGTTCTTCCCGCAGAAGACCTACCATCACTTTCCAAGAGAGGTATGCTCCA
CTCTGTGGCATGCTTGTTATCTCCACTTGCGTTGACACCAATTTACACCTGTTCATTCAT
ACTCACTACATGCAAATAGATAATGGCTTGAAAAATACTTACACATAGTGCCATTCTATC
TGGGAATCCAACCTTCCCCTGTATACCCATTCCATCAGGTTCCACTGCATAATGCCATGC
TGTTCCTCTCCTTCCTTCAGGTATGGGTCCACAATGTCGGGCTCGGGAGCCTGGTATACA
CGGTTGAGAAGATCTGCGACGACTCCGGAGAAGACCCTGCATGCAGCAGGTCCCTCCCTC
TCTCCCTCCACCACCATGTCCTGTGAATTCTGCCTCTGTCGCACTGCATGATTTCTGCTC
TTTGTTAACAAGGTTCTTGCTCTTGCTTGACATGGTTCGCCTTCTCCAGATCTGTGAGCG
GCAACAGCATTCAAGACCACATAACCTACCTGGGCGTGAGCATGCACGCGGAGGCCTGGA
GCAGCTGCAGGATCGTTATGGACTACGCCGAGCTGCGGTACAAGATGGACCTCCATGGAA
ACGTCGTCTTGTCGAAGCTGCAGCAACAGCAGCCCGGTCTGTCGGACGAGCGAAGAAGAC
ACAGCGCCCAGTGAAACCCATGTAAAGAAGTTATGTATTATCATAGTAGCACCACGCACG
CAGCCTGTCACTCCCCTCTCTGCTTCATTGTTTCTGCATTCAGAGATGGGATAACACCAC
CACGCTGGACTGGAAGATGCTCTGTAAATGTTCGTTTGGTAATGTGAAGCATTTTCCAGT
ACAAAATAGTCCATCCATCCCATAATATAAGAGCGTTTTTGACACTACTATACTGTCAAA
AATGCTTTTATATTGTAGGACGGAGGGAGTACTTCTGTTTTCTTTGCTCACCTGTCACCC
CTGACTGAGGTTTCCTTCCATGATATTCATTGTCTGTCACTCCCACAATCAAATGAGATC
GGTTTGAAAATGTTTTGAGCTGATTTGCAAGATGGGTGCATGACTGACAAAAATAGCAGT
ATATACATGAACAACATGGTTTCCACTTCTAGGAACAAAATGAGAACAATAATATATGGG
CTCTGAAATTCTGAATAACCTGATACTTTTGCTGCATGCTAAACCATGTTCGCACTAATA
AGATACAAGCAGAAGAAGTGCGTCAAAGCTAATACAAATAAATGACCATCCCGCGACTCG
ACACAAAAACAATAGGAGCTGTACGAACGAAACATGGGTAATCTCTATCCTATCCCCAAC
CAAACCTGAGAAGTCGCATCCATCAGAAGAAACTGCCCGGCACGGTTGCACAATCAGTTC
CAGAACACAAGGTGCAGCGGAGCATACTTGTCGACATTGTGTAACTGCAGATAAAAGAGA
AAGGGCCCGACAGACTCAGCTCTGCGGCTTCGACGGTCTTCCAATCCCCTTCCCTACATT
TCCAGCTGCATCTATGTAGGCTCCTGAACTCTAAAGGACATGAGCGCGTGACACAATCAC
ATTCGCAAGGAATGGACGCCGCCCGGAGAAGGCATGTCAACTGCAACAACTTACAGATAA
AGCAACCGTGAGGCAGTGCTGATGGCACGAAAAGCCTTTATTCACAGACAACGGGACAGA
ACTGGAACAAACACCGTGTTCCTAAACCTGGCCCGTCTGGTGCTGATGAGCAAACTCGTC
GACCCCCTGCTAGAGCGACGCCGTGAAAGAGAGCCGTCCACTTTACTCATTTGTACTATC
GAAGCTACCATGGCCGTTCGGTCGCTTCCGCTCTCTGGAGTTCTCCCCCCACATTTTAGC
GTCCACGACGGCGCGGTGCCTGTCAGCAGTCCTTGGGGTGTCTCTCTTCCTTCCTGTCTG
AGCTGGACTACCTGCCTGTGATCCTGCCATGTCCATGTCATCCAATCCTGATCTCCGACC
AGAATCACCGCCATTAGAACTAGTCCGGCTAACCTCCCCACCATGCTTTGATGTCCTGGG
AGAATGATGGTTTGGTGAGCGTCCATTGCGCTGTTCGCTGTTCCGCCCACCCATATTCCT
GGCCCTAGGCGTCGATGAATTGCTCCGAGTATGTTGAGTTGGGGCATTTGGATCATATGT
CTGAGACGCTAGATATGAGAGAGCAGTGACAACATCTCCTATATGAGGACGAGTTGTGGC
TTGCTCTTGCAAGCACATAGCAGCAACAGCTAAAGCCTGATACAGGCCCCTCATGGGGAA
CCGGCCTTGAAGCATTGGGTCAGCCATCTTAGGAAATTTCCTGCGATCCTTGAAGAGTGG
ACGGGCCTGCGGATCAGACGAGATGCATTAAATATCCAAACTCAAAATGTCCAGAAGTTA
AGTCTTTTGCTAAGAAACTGCAGTAGCAACTGGTTCCAGACAGTAATTTTAGCTAGTAAC
AAAAAGAACATTTTAAGTTGAAAGTGGAATGGCTTAGCTGGCAGGATGGTATTTAACTAA
GAATGCTGAAGTGAAACAAAGAGCTACATGCAAATCCAGGCAGAAAATTATCAAGTATAG
GATGCCAACAGAAATAACTACAGTATAAAAGCATACCCATGCCACCAGGTTTTGCTCCCC
CTGGGGTTTGGTGTTGTCGATTGCTTTACGCCCTGTGATCAGTTCAAGGAAAACGACGCC
GAAGCTATAGACATCCGATTTCACTGTGAGCTGCCCAGTCATTGCATATTCCGGGGCACA
GTATCCGTATGTTCCCATTACACGTGTTGAAACATGAGTCTTGTCACCAACTGGACCAAG
TTTTGCAAGGCCAAAGTCGGACAGCTTCGGGTGAAACCCTTCACCAAGAAGAATGTTTGA
TGACTTGAAATCCCGGTAAATAACAGGAGGGCTAGCCTTGTCATGAAGATGCTCTAAGCC
CTTGGCTGCACCCGCAGCTATCTTCATCCGTGTGTTCCAGTCAAGAGGTTCCTTCTCAGG
TGGCACATCTACATATATTAGAAAATAATACTTTAGCCTTCAACTAGAGATGACATCGAT
TTTTAAAGGATTCATGGGGCAGTTATACTGAGTACACATGTACTACTAAAAGATACTTAG
TATATATTGCTATAAGCACACATGGAATTTTTAAGATGACATTGCAAAGAGAAGATAAAC
AAACCATGCAAGTGATCTTCTAATGAGCCCAGTGGCATAAACTCATAAACAAGGAGGCGT
TGGTCACCATCAGCACAATAACCAATTAGATTGACAAGGTTAGTGTGATGCAAGAGACTG
AGCATGAGGACCTCAACAAGGAATTCTCTATTTCCTTGGAGACCGTTACGATCAAGTTGC
TTCACAGCAACAGCCTGAGAAGTACAATTATTTTGTTAGTGTCCAGGACTAACCCAATGT
AAAATAAACATAGGAACTCTACCAATATTTTACATGGTATAAGGGAATATTTCAGCTGAA
TCACTCGAAACCTGAAAGTCGAGTGTATTTAGGAAGACTTGAATGTACTGAGACGGTATA
CTAACCTGGCCATTCTCGAGGCGACCTTTATATACACGTCCGAAACCTCCCTCACCCAGC
ATGCAATCTTGTCTGAAGTTCTTAGTGGCGGCAGCAAGCTCACGAAAAGTGAAAATCTGT
GCCGCAATGTTTTGGCTATTCCCATCCCTAGGGATGGTTAGATGAGTATTCTTAGGGTCT
GACCCACCCTGCAGTTTCAATTTATCTGAGCAGAAAATGATTCAGAGTTAGCAGTCAGTT
TTAGTACAATCGGTTACATTAAATAACTTAATAGAAAAAAAAAGTGGTTCACTCTTAGAG
CACTAACATCCGGCTAGAAGAAAGTAGAAACATTAAAAGAACTTGAGTGGTAGTACATGA
AGGAAACTTTGCTACTCTACAAGGACTTTAGCTTAAAGGAAAAACTCATTTTTAATCATT
CGTCTTAACCAAAAATCTGTATCATATTCCTCCCCTGGGAGGTAGTTAACAGCCACATTT
AAGTAGAAGGCTTGAAACTATTACTCAACTTGTTTCAAACAGCCGTTCGAGTAGAATTTG
CCAATCAGTTTCTGAGGTAATACTAGAAGCACACCACAATGATGTAAATAGTGAAACAAG
TATTTCCTACAATTCCTCCATAACTCATCTTTGTGAAAAAAAAAAGGATTCTCTAGCAGT
CTTTTCGACACCACAATGGGCAAGATCCTCTTATTAATCTTTTCCGCACTACAATCGCCC
TGCGCTTATGCTACCAAACCGGCAACCCGCCGGAGACATTGAAGGCAGTTTGTGTATCAC
CAAGATGACTTAGCTGTCTAGCTGGAGAAATACTGGCTCAAACATAAGCAGCATATGTAA
AAAGGATTAGTGGAATGACAGCCACATCATGCTGCGTCTTTATCCTCTCCTATCCTATAT
CGTATCCTCTAACTCTCTTGTAGTATTATGCGTATGGGGTACAAGGCATGGTAACAAAAT
AACCATCGCTTGGTACCCATGCATAGGCAGCCTAGTACTACCTGTTGTCCAAGTTTTAGT
ATTGGCAGAAACAAACTAGCCAGCTTGCAAGCCAGGCGCTCCATCTCTCTCAACTAAACC
AGAGGTAAAAGCAATCCTAGCAGCAGCACATGCATTTCCGTCCCTTCCTAACGGGATGCA
GCAATAGATAGGCGCACACACAGTCTGTGCTACTGTCAAAGATCGCAGCTGAGCTCATTC
CTGCAGCTCCGCCCGCCATGGCCATGACTCACACGCAGTAATAAGTAAGCAAAGCAAGCA
AGCAAGCAGGAGAGGAAAGCATGGTGACACTAAACAACGCGGCCGCCGCCGCAGGGCACC
CAGCAAGGAGCAACGGGAAGCGAGAGGTGGAGAAGGGTTTGCAAGATCCAGCCGGGCGCA
CCTGATCCGGCGCGATCCGGGGCGGCGCCGTCCTTGCCTCGCGCGTCCTTGGCATCGGCC
CCCGGCTTGCCGGCCTCCGCCTCGAGGGCCGGGCCGAAGCAGGAGAAGCAGCTCATCCAG
GCGCGCTGCCCCCGCCTTATCCCCTCCCCTCCCCTCCCCTCCCTCGCCGGAAGCAAGAAA
ACGCGTGGGAGACGCGGACGGGAGAGGCCGCCGCGCCGGGGCCGGACGACGGGGATCCCC
GCCCGGGGAGGATCTCTGGCTGGAGCGAGGGAAGGTTCCCAAGCAAGACTGGATATTTGG
GCGGGGGCCGGGAGGGGGGGGTCGGA
