Contig Data
morexGenes
Links



Map Locations of contig_53046 (6426 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_53046

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67407 1 1316 bp AK371350 Available Available None





CDS Structure of MLOC_67407






Contig Sequence (6426 bp)

>contig_53046 6426 assembly3_WGSMorex_rbca.fasta
TGAAGATGCTCTACTCCTTGACTCGTTGTTGGTTTCTCCATAGATAGATCCTTGTTTGGC
GTAGGAAAATTATGAAATTACTACGATCTCCAACAAACCATGCCCTCACCGTCCTCATCC
ACTTCATATTCATGATTATCTTGATGCACTTCATTGGTTTGAGGCCAATGAGAATTGTTG
GAGCCAACATCCATAGTTGACAAATATGCGCCATCATTGAAGTATTCACTATAAACTATG
ATAAAGAAAACTATATCAAGCTATTCATATGTACACAATTCTAGCAACAACAACCAAAAA
ATCTTACCTTGCGGGCATTTCATCAAACACCATTTGCGCGTCGCTGTCGGCGCGCCAAAT
TGCGAGTACTCGGGCACTTGGGGTGGCGGCGGTGGGGCTGGAGGCGCTGCTGGTTTCTTC
CACCCCGCCACCTTCTTTTTCTTTTGGGTCGCCGCAGATGGGGCCACCGCGACCATCGGT
CACTTGGAGATGGAGTTGCGTGGTTGCGCGGTGGGCGGCAGCGCAAAGCCACCCTGCGAG
TCTGTCTGCGACGGCATGAAAAGGCCATGCACGAGACCGAACTTTGGAGCCTGTGCTCCG
CCGGCGGTGAAACCGGAGGTCATCCCGTGCAAGGGTTGCGGTAGCGGAGGTGGCGGTGAT
GGCTTGGTCGCGGACGTAGGGAGGGGTTGGGATGTGTCGCCGTGGCCATCCATCACTGAA
ATTCCGTCGGCGAAGGCGCGGGGCGATGCAAGGACGAGCGCGGCCGGAGTGGTCAGTGAC
GGTTGGTGGTTCGCGCGCGAGTTTCATTTTCCAACATGCTGGAGCGGATGCACCAAATAA
ACCATGTGTGATACAGTTTTTCCCAACGCGTTGGCGTGTTTTTACCGCGCCCGACATTAT
TGCATGGTGCTGGAGCGCTCTGTTAGGCCGTGTGCGCGCTATATTTCCTTTTTTTGGACG
CGTGGCTTATTTAGTTCCTTTATTGGACATGCTCTAACATATGTCTCTCAACATGCACGC
ATGCCACTTCATCAATAAACATGCCTAGAAAAAAGACTCATCTCTACATGCAAACATGCA
TAAGAATCTTTACTCTATTATGTTATTAATATTTAATAAACAGTGTACAACTTCATAGTA
ATCAAACATAATAAATTATATGTATTTTCAATGTTAGCTTTTTATATTACTTCAAATGTT
CATGTTTCATTCAACGAATCGCATTGAAATATATTGTGAAATATTTCTGCAACAACATGC
GGGGTATCATCTAGTAACAACAAAGGATAAGTTTGGTCTAATGTGAATAAAAAAGACGAG
TTTGGTCTTCTGCAAGCCATTCATTTATGAAGATATGAAAAAACGTATCCCTTCCGATTC
AAACTAATTGTCGCTGCCTTAATGCAACTTTGAAAATGTCCATGCATGTATATATGCAAA
ACAGTTTACGTTCTGGTTCCCATTTGTTATGGAAGATGTGAATCACACATCTTCACAAAT
ATGTACACATAAATGTATATGTCTATGCATTAGTTTTTTCAACAACTCGTTGTATCTCTA
CCACTGAATACATGACAAGATGCAAATGAGAGATAATAAATATGAGCATTGAAAAATATT
CAAAAATAAATTAAAGTTTTCTGATACTTTTACTAAATTAGCCAAGAGTGGATAATTACA
AGGGACGAGTCATTTATGTTGATCATTTTCTAATAGCGATGCATTACAAGAGATGTGAAT
ATCAAGCAAATGTTCACCAAATTTGCACATAAATATATGATTTGACATTAGTTTTCAGTA
TATAGCACATCGTATATATGGACAATGTGTAAATGAAGATCAACAAATATGAGCATTAAG
CAAACTATTTGTAAAGGCCAAAGCTTCGTCAGATTATATAAGTAAAGCAGAGAGAACAAT
TAATGAGTCATTCATATAGACGAATTTCTACTAGTCATTTATTTAGTACGGAAGATATGA
TTTTCAAATCTTCACTAATACGTGCAGACAAATACGGAGTATATATATGAGTCCTCATTA
GTTTTTCAATATTTCACAACTGATTTCTTTCTATCTCTAGCATGGAATACAGATGGAGGT
GTAGTCTGGATATCTGCAACTGCTCGTCCTCAAGCTAACGCGGCAGACACTGAAGCGCTC
CGCAATAGGATTTTGGACAATCAAACTGGTAGTTTTTGTCCTCCAGGAATTGCTAACGCC
GTCATGAGCCAAGGACAGACTCGACTGCCGCTGTTGTTGAAGAACCAATCGATCCCGCTC
GATCCTTTCCAGGTGTTGGACTGATGTTAAGGGCTCCAGCGTGCAGACTTTCAGATTCAT
GGTCCTGGTAACATGTGATCTGAGCATTTTCCCAGGGCTGTCCTGATCTCCTTCAGCATC
TCGTCGATCCCGATGCGCCTTCTGCAAGGGCAGGAAATAAACAGAAATGAGATCTTGCAA
CGGAAGAAAAGAACAGTTTTTCGCAACACCATTGGGGAAATTAAAGGGAAAGTGTTCAGT
TTGTAGAACTTGAGGACATTTGAAGCACTGTCCAAGAAAACTCGTGGTATGAACAGCAAT
GCAAGCATAAACTTAAGTAAAATATTAAACAGGAACAATAGATTAAGTACACTTACAGTA
CACTTGTGTCATTGTACACAGATTATATAATGAGCTGTTTAAGAACACACTAAAACACGT
GTTCAGTTGGTTCAGTGAGGCGACTTACAGTACGCTTGCACCGATTACAGCTTGAGGTCT
TGGATAGTCCCCAAGTTCCTTATCATCGTCTTCTGACATATGGTGTCTGTTGAAGTTCAC
ATTTAGCTTTTCTTTGCTGGCATTTTTGTCGTGGCTTTCTTCACAGCCTACTGAAGATAT
TTCAAGTGCTAATGAAGATAACCTATCTTGGGCCTAAAAGGAGGAAAACAAGTATTAGGA
CTCCAACCAATGCCAAGAAAGATCAAACTTTCAACAGATTAGTTGAAATAGAAAACTAAA
GGCTAAAAACTAGGGAAACCATAGTTTGATCCAAATTAAGTATGAAATTGCACCTTAGGA
AGATCAATCTTGTTCAGAACCACAACATAAGGTCGCTCCAGGTATTTGGGGTTATACATC
CTTAATTCCTGTACAGAGATAATTGTCAAATGATCATTAGACACTGAAACTATGCTTGAG
AAATAAAACATACATGTGATTCAGTTTTTCACAAGCCTTGCATTTGAAATTAAGGTTTTG
CAATCCCTTAACAAAGCAACTATTATCCTACAGATCCTTCCAAGTGCCCACTGACTAGAT
CCTAATACTTAACAGCCAACAGAATAGTTGGTGCAACTTCCGCTACTCTCATCAATCTTC
CCTTCAGTTCTATTGATTGAACTTCCTATGTATATCAATATCTGACAATGAGATTATGCC
CCCCAACACATGAAGAAAAAAACCATATCAAACTGTCCCACTACTGATGCTAGTGTAACA
AGAGCTTCCAGGTTCACGGCTATAACTATGAGAAATTATATAGTGAATGTGATTGCATTT
TTTCCAAAACAAAATAGGACTTGGGAAGGATGAAAGCAATTAGAAATTACTTCTCTGACA
ATCTTATAATCATTAACAGGGTCATCAGCAGCAGCATCAACGACGTGGACGATTACTCTC
GTTCTCCTCAAATGTCTCAAGAAATTGCGACCAAGACCCTGCAGTGTAATTAAACCACAT
GATGAATCCGCCAAGGCTAACCACGGGAAGCAACAAGACGACAGCTTCAAACAAATATCG
TGCAAATAACACAAAAGTAAACGACACCTTGCCCAGATGAGCGCCCTCAATAAGACCTGG
CAAATCTGCCAATGTTGCTCCAGAGGAAAACTGCAACGCCCCTAAAGTGGGATCTCCACC
AAGCCGGCCAAGATTTGGCATTAATGTAGTAAATGGATAGTCCGCAATGTCTGGTCTTGC
AAGTGTTATAGCTGATAGAAGTGTTGATTTTCCAGCATTTGGAAGTCCCTGAAAAAGCAA
ATGAAGACAATTAGGCCAACATTGTGATATGCCAAAGAAATACTCCCTCCGTCCCATAAT
ATAAGAGCGTTTTTTATACTGTGTCAAAAACACTCTTATATGATGGGACGTGGGGAGTAG
ATCTGAAGCAAGCCTTGAAAGCCTGATAATCCAACACTGAACCCTAAAACTGAAACAGAA
GGAACTCTTTTTTTGCGACTGAAACAGATAGAACTCTTAGCAATTGCAACCCTTCTAAAC
CAGAGTCATCTGATATCTTGACTCTTGTACATAGAAAATGACCTGAACACTTTTTTTCTA
AAACGAAAAACAAGAGCAAATCCATAAGAGAGGTATGTAGTAGTGCAGCACTCTTACCAC
TAGGCCAACATCTGCAACCACCCTTAAGATTAATTCCAAGCTTATTTCCTCACCAGGCTG
GCCATGCGTTAATACCTACAGAGAAAGGAGATGAGACAAAATCACAAAAAAAAATAGAGG
TGAAAATGGAGAATACTAGTCAGCAAAGAAAGATGACGTTATTTGAAATATTTGGATAAT
CCTAAACCATATCGATACCACCCGTTTGGTGTACAGCATTGTTAAAGAGTCGTATGTACT
CATTGGGACTGAGCATCTGTTTGTTTATCACTCATTGCCTATTTGTGAAAGGCATCACAT
CAATTGGAGAAATGCAAACAGCTAGAGTATTGCTAGATGTGCGAGAACTTTGAGTGGAGA
CACAGAACTAGATTGTACTATGCTCTCTGATGGACCGGTGGTATTATTATCTATGAAGAA
CTAGAGTAACCATACACACTAAACAATACAGTATCATGACCTCTGCAGGACCGCTCAGCG
CCTCGCACACCAGAACCTGCCGCATAGCCCATCATGCATGTTTTCCAGCCAAACTTTAAA
GACAATGCAGCACCTCCCTGTGGATTCCTGTTCTTCAGGGTCATTTGGCCAAAGTCCTCT
CATGGATCCATGCCCCGAAGCCTGCAAAGGCCTTGCAAGCACCATGCTCCTCACGTCCTG
GATGCTCTGGAAGCACAGGAACAACTGCACTGTTGACAATATGCACCTGGACTCCAATGT
CCTTCTTAGGGACATCACCGACGAGGCTTGTGTGTGGGTTCGCGCGGGCGCTGCTGGGGC
GGCAGCCTGTCGGCCTGAAGGCTGGGATATCCACTGATCCCCCCCCCCCCCCTCCTCCTC
CCGGCAGCGCCTTTGCCTTTGTTTGTTTTGTTTTCTGTTGCCCGCTTGGGCATGTAATTA
ACTTTGTTCCTCCCTTTCAATACAATGAGATGCAATGCTTTTGTGTTTTCTCAAAAAAAA
AAAAAGTAAACAAGCAGCAATGTGTTATACGAATCACATCATTTTGTTCTCATCAATCCT
TCCCTAATTTAACGACCCTAATAAGACAGCCTATTGGTAAAAATAGCACCGAACCTACCA
TCAAGTCCAGGATTATTTCATAGGTAACAACTTACCTTATCAGTAACATCACGCATGACA
TTAGGCGATAAAGCCATGGCTTTCCCTCTTTTGTAATCGGGCGCATCGATCAAGCTGATC
TGCAAAAGTGAAGTAAATATGTAAATCCATAATAATATTAGCAAGCATATGTACCATACC
AAATGAAAAAGAATATCAGGGAACAATGAAAAGTGTCCACTAAACTGTTTTAAATAAGGT
AATCACATACTCAGTTACACTAGAATCTGTATTCAGAAGAATAGGCATGGTTATCATCGT
CTCAACTAGTCGCATTGACTGATATTTGCAATTGCCTCTATACCCACCAGGTCATATGTA
CAATTATGCTACCCATTGGTAACACAACTGTACCAGGTAACAATCTAGTTACAGACTCTG
ATACAGCCCTCGGAGTTGACTTTGGGTATAGTATCGGATACAGGTTTTCAGGGGTAGAAC
GATTCAACTTAAATGGGCTGAAACTACACAAATGCATCTTGACATGTTAAAACTGGTTAA
CTGTGATACTTGGCAAGCAGTTTACACAGTTTGCCTGCAGGTGGCAAAAACCGGAGCATC
GTCGTGAAATCTTTACTAAGCTGCATAGAATATGTGCTGTCAGTCCATAAGGAATAACTT
TGGTCTGCTATTGCTGAAGCAAAACCCATGCCTCCTAGCATAGTTGTCGAAATGTTTGCT
AAGTGGCGTACGACGTTTTGAGACAGAAATTCAGTCACTCTGTTTTATAACATTCTAACA
CGACGATACAGCTTAACTCACCCCGCCCTGTCCACCCCTGGCGACGAGCACCTCATCACC
AGGGTGGGCCAAATCAGCAAGAACAGACCCCTTCTTGCGCCTCACAACGGTACCTGCAAT
GCAATTCAGCGAGCAGGCAAGGCATCATCAGTCAAACACGTAACCTCACAGAGCCACAGA
GCAAAA