| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_53033
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_67396 |
6 |
2460 bp |
MLOC_67396.4 |
Available |
Available |
LOC_Os01g37820.1, FRAME:-2, EVALUE:2e-122, 13101.m03846 protein oxidoreductase/ transition metal ion binding protein, putative, expressed |
CDS Structure of MLOC_67396
Contig Sequence (10337 bp)
>contig_53033 10337 assembly3_WGSMorex_rbca.fasta
TTTTTATGATGCACGAACAGTTGACACAAAAACAGTACACCTTACTGGTGGTCACTTTGT
GGACGGTATGCAGAGCTAGAAGGAAGGTGATTTATGAGGATATCTTTCAAAGCCCCCAAT
CGGTAAATCAATTCATACTATCCTACATCACCGATCTTACTTTGACACAGAGTAACGGAC
CTTCCTCACCGCCACAAGCAGTGCAGCAGACGAGGGGATGGAAATGTCCTCCGGAGTCTT
ATCTAAAGATCAATGTAGATGCAGCTGTATCCCAAAACGGCATGAGGGGGGTGGCAACAA
CTATCTGTCGCAACCGTGATGGTCTTTTCCAAGAAGCTTCAGCGATGATTATCAAGGGCA
TAGGTGATGCACCCACACTCGAAGCTCTGGCGATACGGGAGGCCCTTGCCCTTGCTAATG
ATCTATACATACAGCGTATACATATTGCTTCTGACTGCAAGATGGTGGTAGAAGATATCA
AGGACAAGAAGCCTACAAAATACGATGCAATTTTACATGAAATAATAGAACACAAAGCTT
CTTTTGAGGCATGCAACATAATGCATGAATATAGGAGCTCGAATGTCGAGGCTCACAATT
TAGCGGAACATGTTATGAGGTCAGGGGAAGGCCGTCATGTCTGGCTAGGCAACCCCGGAA
ATTTATCTATTGTACCTTTGAACATTGATCAATAAAGTTTTGCGAGATTGTCTCAAAAAA
TCTATACCTTTCTATAGACACCACGCTCCTCTATGCACATCCCTATAATGTCAAGAAAAT
AACCACGACAACCAACTACCCCTTAATAAGGCATCACTATATGTGTGTTTCTCCCTTGAT
AATGACTGAGCTGAACCAGTTATCTTACAAACAACACGGTGGTGATATGACCAGTAATAC
GTGTGACCACGCAAATCATTGTGGTTGAATGGTTGTGGTATAGGGTGCAGCTGAGCCTCG
GCCCGCAAACAGATTTCCGCTTGTCCATCCCACGGTTGAATTATTAGTTACTCTATATAT
GAGATATCACTAAAATATAGAAGAGATAATATAGACAAGAATAGGCCACAATATTTAACA
ATCATCTCACTAGTAATATTTCATCCAGATGGAGAAGCTCGAGTGAAACTTGCGTGTCTC
AGCACAACGAACAGGTCATAACGTTACACGTGTGCAACTTGAATTTTTCGTATCCTGTAG
ACTGGCGGAGATCAAAACAGGTCGTTTGCACAACAATATAGGTAGACAGCATCCTTCATG
CTTAGCAGTGGTGGGGAGGTCGTCGTTCTTTTCAATTGCAAGATAGTGCGTCAAGATCAC
GTGATGCGTGTTCTAGCCTAATCGTTGTTGGATTTCTCCCTGTTACCAAAATGGTAGCTG
CTTCTAGAATCGCGCGACTCTGCATTCTAGATCTTGTGGACACTGTACCCAGCTTCTTCA
GTATTCAAGCTGTCGTTCCAGCTCTGAAACTCTGACCCTCCGAACTGTATTTCCTTAATG
CCCAGATGACTGCAGAGAACCAAACAAACCCGGATAAGATTGAATTTTTCTTGCAAATAG
GAATACCGTAACAAAAACATGAGAAAATGGAGAGAAACTGCGAAGGTAGCAGTGTCATTC
TGGCATTGTACTACCCAGGGAACTAGCAGTCAGGCAGATTCATTTTAACGTATGAAATCA
AACAAGAACTAGACACCTACTTGTCATTTCAGGTGGTAAAGAAGCAAATCAATTAATATA
CATTCCTTTCAGGTGGTGTATGCCGTTTTCTTCCAAAGGCAGTTCAGCATAGCGCTCACA
TAGATCGCTTGCAGGCAGTCAAGCACAAAATAATCGAAGACCAGAATGTTATCAAAATTT
GCTGCAGCTTTGAAAATTTTACAAGTTCTGCAACTAACTGCACTTCAATTTGGATGTGTT
TTCCGGAGAGTGAAAATGTTATTGCTGGTAAATTTAAAACCATACAATGTCTAAGAACTA
CTTACCTACAAAGTAGAAATAGCAATTGCTTCACTTTAAAGAAACAAGGAATATAAAGAT
CAATTCGTTGCAGCAGACCATTGTAAATGGAAGTGTGGGACATAAATGATTGTGGACCTA
AGTGGTTCACTTAAACACGTTTCGGGTGCGCATTTCTTGAGTTCATGGACTTAAGTGTTC
CTTCACCACTAGTTTATGGACTAATGTTACCTTTTACACAAAAAACATTGCAGTGTCATC
TGTAACAGGCTGTAAAGACCCTACACACATAACTAGGAAAGAACTAGTGCCTTCCGTTCC
ATTTTAATTTCATCAACAGATGCTACACCATAATTCCAAATTAATACTATTTCTCAGACA
TGATTTTCATGAGGCATGCAAAATAGAAAAACAGAGGGAATACATATTATGTGAAGTATA
TCTAAGGATCCAACTGCATCATCCTAGTGTTCAGATCCTAATGAACTGAGAGTAGCAGTA
TACAGCAAAAATGATAAAATAGCAACAAGTGTTTCCTCAAAATAAAATGAAGTTGAGGTT
CAGATTCTCACTCCGAATTTATGGTGGCTAATGAATTAAGCAGGACGTCCAAAAGCAATG
GATCTTGAATACCAATGTCCACCCTGAGGAGATCAATAAGATCAAAGCAAAGAGTCATGG
CTGATGTCAAATGCAACTACATCTTGAACAAGTACAAGATGCATAATATTTTCTGTTTGA
AAGATCTATCTTAATTGAAGGGACTAGATATTTCTGACTCAAGCAGCCACATAAGCCTGA
GAAAAACAATATCGGTGTTCCTGTAGATGTTGCACAAAGGTATAGTATATTAGTATGATA
AATGTCATTTAATGAAGATGTTGCACAAAGGTATAGTTTAGTGTTCCAGTAGATGTTGCA
CAAATGTATACCATGTTAGTATGATAAATGGATAGTCCATACAGTTTAGATGCTTGTCAT
GAGTGGAAGTAGTAACAATTTCAGTCAGAGTTTGGACGTCGTAGTAACTGATTTTACATA
CATGCAAGAAGTCATGGCAGGCTTATTGCACCAACAAATTTGCTCACAAGTCCGAGGTTG
CACCAACTAATTTCTGAAAATTAAACCCAGATTTGATGGTCTTTATGTTGCAAATGCTCT
GGTTGCATGCAATGTTATACTTTGCAAAATCTTGCTTATACAAATAACTGATAATGTCAT
TAAACAAAAAATGTTGTGAGGTCAGATAGAACAATCATGAAATCGGACTGTGGAATGACA
ACCTTGTTCAAAGTACCCTACCATAAGTCACATGCCAACATGATTTTTTTTACAATCAAC
TGTTTGTAATAAGGGCTAGAGAAAGAATCCACACCAGACACGTGCTAGGTTCTCTTGAAT
CTCTAGATCACCGATGTTGTAAAAGGATGTTGGGGTGGCGTTTGCTGCTTTAAGAGCATC
ATAAGTTGGTCTTTTACAATCTAAACTCAACTGTGACAGCTGCAAAGAAACAGTAGTTTC
TTACTGCAAAGTAGGAAAGTCCAATTGAAGAACTGAAGTGACCACAATATGCAAGATAAT
AGCAGATGTTAGGTGTTACATTCCTTTTATGTCAGCCATTTCAGCAAACACCACAGGATA
GTGAAAGTGAACACTATGAATTAGCTGTGTGGTGAGCCACGTAAGGTCTTTTACCAGTTT
CAAAATGACAATGTACCATAATTAGCTGATATAAGGATTATCATACCATGGTATCATCAT
AGTTGAAGTATATGAGCAAGAAAACAAAGGATTTGCCCTCTACAAACTTCAGAAGGGGCC
ATACATCCGGTGCAATAAGTATACCTGCATATTCATGGAATTGCACCCACCAAGGCGTCC
AAGTATATGCCATGATCGCAGAGCCTGCAAGCACAATAAAAAGGAAAAATGCAACATCAT
TTGAATATAGTAACTGCTACGTAAAGCATCACGAGTAATTTATTTTGAAGGAAAAACAAA
AGAACTCACATCACAAATTAATTTCACATCTTTTGGCAATAGAGCATTGTGGAACTCAAA
CCATATATATGAATTGGAGAAATCAAACCTAGCACGGGCAAGAAAAAACACAAATTAATT
ACAGTAGCAAATGATCCTGAATACATCTTGTACACATGGTGCATGTATGAGAGTATGGAA
GAAAACAGCGCTGATGTCCTTAGTCAAAAAAAAGGAAAAAAAAACCTTGCACCTAGCACC
AAAGTTGTGCTCGCATCGCTCTCCAAGGGGGCGGCACGTGCGAACCCTAGATGCCGTTCT
CCTCCTCAACCTCCGGCCTTGGCCGCTGATGGGCCGACGGGGAAAGCCCGGCTCATCGGA
TGGCAGCGGCAAGGTGACCTCCCCTCGCATGTGGCATGTCGCCCTGGCCGGCTCAGCTTG
CTCGTGGCATGGTGGCAGAAGCCAGCGCGACGGTGGGCCGTCAATCTTTTGGCGGGCTGC
TCGTCAGCGTGACGAGGTCGAGTGCCGCTGACCATGGGGCAATCCGGCTCGCACTGGATT
TAGGCCCCGGTGCCTACATCTGACGCTCACGATGACAGTTGTCGTGCTTGTGGGGATGAC
AGTACCCAGTGTGGTGGTGGGTGCTCACCTGTAGCGCCCTGATTCGAGGCGGTGGCCCCT
GATGGTGCTCGGGCTATGTGTGCTCACTGGTTGGCGCATGGCGAATCTGGGCCACCATGT
CATGCTTCCTTGGTTGTGGTGGCGCTTGTTGAGCGCGTGAGGTCGGAGGTCTTCAATGGG
CGGTGTGGTGGTGGTAGGTTGGTGTGTGTTAAGCTTCATGCACTAGACAACGCAACCAAA
AGTCCGAACTAATGAAAAGGGCTAGTGCAATCCACATATACTGTAACACCCCCTCTCACG
TGTGACAGGGAAGACAAGTCAACACGTGCAACCGGAAGAGAGCGACAGCGCGCGAAACTC
ACGTATGACACAAAGGGGGGCTACCAGCAATTTTTAAATAAATTACGAAAGCCAAGACTT
GAACTCAAGACCTTAGCTCTGAAACCATGTTAAGCTTCATGCACTAGCCAACTCAACCAA
AAATTCAAACTAATGGAAAGGGCTAGTGCAATCCACATATACTGTAACAGTGTGGACGGC
ATGTGCCAGGCTTGGAATAGGGTGGCTGCCAGCAAAAGGATGGCTCATATTGGTCGGCCT
GACAACGGTGTCGCCGGTGCCGTCACCTTCCTGAAGGCATGCGCCACTTGAGGCCGTGGC
TGCTATTCTTCTCGGTTGGCATCGTTTTGATGCGGTCTAGAGGTATCAGAGTCTTCCATC
TGCGATCAAGGTGGTAGATGTGCATGTTTTTCTTAAAACAGCCAACGGTTGGATCTCCAC
CTGAAAATGATCTCATTTTAAAAAGAGATTAATCCAATTTATAAGAGAAACTGGATTGAA
AACCTAACAGATCGACGGTGAGTGTGCATGGTGAAGCAATCCAGATGTGGACTCGGCTCC
GTGATGGCCTTCGGTGTGGACTCGGTCGCTCCTTGCCCTTCGCTGCGCCAATAGCCTCGA
GGCTTCAGGATTTGGTCTGGTAGATTGGAGCTCTTTGTATACAGCTGTGGTGTTCCTATG
CAACCTTTAAGGACAATGGAGAGGATAGGCCTCCGTTTCCTTCTTTTTGGCGCTTGCCGT
CTCAGTCTCGCTTGCCGTCTCAGTCTCGGTGTAGTTCTTCTTAAAAGTAGGCAAATATTT
GTAATTTTCATCGATTAAGAAGAAGAGAGTTGTCTGGTTAATTAGAGGAAAATCGGACGA
AAACCTAGATTACAAACCACACACAGGCACCGTTGGACAACCTGGCCACTCACAAGATCA
CGACACAATCGGATCATCGGCATCATCCATCACACATGATCTTTTAGGCTTGTGATTGCC
TGTTGTAGTCATTTATCTTGTATTCTTCACTTCTCTTAACGGAAAGGAAGCAAAAGAACT
CATATTTCTCGAGAAACAACCTATGGTTGGATGGTTAGGACTTAGGAGGGCAGTGATACC
TTGAGCCCACCAGGTATAAAACCCTAGGTTTGACGCTTTGGTGTCTCATAAAGGCGGAAT
ATTCTTTCAGTGAAAGGCGATGTTCCCGTAGAGAGATAGGCGGTTGTGGTGGAAAGAACT
CGTGTTTCTTCGATGAAGTTTACCCTCTTTTTGGGCCGGCAAGAATAATGAGATACAACT
CAGAATAGTGCTCTTTACTATATATAAATATAAAGAGTAGGCGTAGTTGAAAGTCAGAAA
TTACTTATTGCTGCTGTCTTTCGTCCAAAAAAAGAGAGTATGGAAGACATGATTACTTGT
TGAAAACGACATTCATGGGATTGGGCGAGCCGGTCTTGGCCTGCACGATCTTGTGCCGCT
TCTTCTTTATCCTCTCCTCCATCTACCCAATCAAAGAAACAGACCCATCATTAGAAGGAG
GACAAGCCAAAGAAGAAGGGGTGGAGAGGAGAAAAGAATCAGTGCTCACACGGGACTGGG
CTTTCTTGGGATCGTCGAAGTAGTCCCCCATAATGTCCGCGATCTCGGGGTCGTGGTCGT
GGTCATCCTCTGTGTGCTGCCCCCGCCTCGGGAGCCCCTCCTCCTGGAGTTCCTTCCACT
CCTGCTCCTCCTCTTCTGTAGCCGTTGCGTGTACCGTTTCCCCTGCGCTTCGGCGGGCGA
CGAGGCGGGAGGAGGGCCTGAGCCCAGGGAGGATCCGTGTTCGCGGAGTCGCTGTCGCGG
TTGGGAGCGGTAGCGGTAGCGCGGAGACGGTGAGGTAGCCGCCGAGGAGGGTGGGGAGCA
TCCTGGTGCGGCCGGGCTTATTTGCTGGCTGCTGATACCCTGCTGGTGGTGCTGAGGAGA
TTGAGAGGCGCGTGTTCCGACCTCTAGGCCAGCCGCGCCGCCGGGATGAACGGGGCGGCA
CGTCGGAGGTTGAGGAACCAAGACTGGGACTCGGGAGGGAGCGTAGCAGTGTATAGTGGA
TGAGGAAACGAAGAAGAGAGACGGGGCCAATACGGGATGCGACCTAGGGAAGCCGGCGGG
CCGATCTACACCAAAGCTAGCCAAACGGACCGGGCTAATCAGGCCAGCCCGCGAGCATGC
GGCACTGTCTGTCATGGACCAGGCACGGCACAGGTTAAACAAGGAGCTCCTACCTGCCGA
TCACTGCGGCAGGCAGCCCTGCGCCGCACAGGGGAAGCCCCGACTGGGCCGGCCCAGTTT
TGTTTCTATTTTTCTGTTATTTTTTTCCTTCTCTGTCTTATTTTCTTTTTTTGGTTCGTT
TATTCTTCCATTTTTTGTACTTGAACATAAAAAAAGATTAGAACTTTAATATTTTTTTAA
AAAATCGTGAACAATTTTCTAAAGCACAAACATTTTTTAAATCATGAGAAACAAAATTCA
AAAAAAAACAATTTTTAAAAACCCAGAACAAATTTGAAAACATGAACGAAATTTTCAACC
ACGAGCATTTTTAAAATTTTGAGAACAAATTTTGAAACCAAGAACAATTTTCAAAAAAGT
GAACAAATTTGGAAGCATGAACAATTTTTTTAAAAACGAACATTTTTTGAATCTTGAGAA
CAAAATTTAGAAAAGGTTTGAGAAACCCCGAACAAATTTGAAAGCACGGACAAAGTTTTA
AAGCACGAACAGTTTTTGAATTTTGAAACTGAGTACAGTTCTTTTTTTAAAAGTGAAAAA
AATTTGGAAGGGTGATTTTTTCTAAAGCACGAATATTTTTTGAATCTTGAGAACAAAAAT
ATGAAAAGGAGAACAATTTTGAAAAAGCCCGAACAAATGTGAAAGCGTGAAAAAAATTCA
AAATTTTAGAGCTTTTTTTGCTTTTTGATAACAATTTTTGAAAGCGAGAACAATTTAATA
AAACATGAACAAATTAGGAAGCGCAAACACTTTTTTAGATACACGAATATTTCTTGAATC
TTCGGAAGAAATTTTTCAAAACAAGAACTTTTTTTAAAACCCTAGAAAAATTTGAAAGAG
CGGATAACTTTTAAAGAACAAATAATTTTTGAATTTTGGGAACAAATTTTGAAACCGAGA
TCAATTTTAGAAAAACGAGAACGAATTTGGAAGCGCGATTTTTTAAAAATCCACAAAAAA
AATTGGAAAACAAAAATAATTTCTTAGTCTATAAATAAATTTGAAAAGGGGAATATTTTT
GTTGTAAGAAAGAACATTTATTGAAATTTTTGAAATTCTTTTGAGACGGGAACATTTTTT
GAACTAATGTACACTTTTTAAAACATGAACATTTTTAACTTACCTACATTTTCTGAAACG
GCAACTATTTTAAGAAAATTAAGAATAATTTTTAAACTTCCTGAACATTTTAAAATCATG
AATAATTTTAGAATTGCAAACAAAATTTGAATAAGTTTTCAATTTGTGAACTAATTTTCA
AAAAAGAGAAACATTTTTCATAAAATAGGAACATTTTGTATTAAAATGTGAAAAGAAGAA
CATTTTTTTTTAAATTGCGAACAATTTATGAAAAAGGGAACATTTTTTGAAAAATCAGGC
AGTTTTTCAAATACAAGAACAATTTTTGAAACACAAACATTTTTCAAAAGATGAACATTT
TGGAAGAAGGAACATTTTTTGAAGCACGGACATTTAAATATAAACTGTGAATACGAGAAC
ATTTTTTGAAATTTAAAATGAAAATTATAAAATGTCAAATAGAAAAATAGAAAAAGGAAG
AAGGAACAAAAGTGAAGGAAAGAATTAAATAGGAAACGATAATAGTTTTTTGGAAAAAAG
AACATTTTCTCAAGAAAAAAAAACTTTCTAAAAATGGCTAACATTTTTTGAAAATGTCGG
ACATTTTTCTAAAATCCCGAACATTTTTGGAAGTTAGGAAGGTTTTTGAAAAACGGAAAA
TATTTGAAGTTTGGAACATTTTGTGAATTTTAAGAAAAAAATTAAAACATAAACATAGGA
TAAAAAATAACCATAAAAATGAAGAAAAACAAAAAAAAGGAAAAAAAGATGCAAACGAAA
GATAAAAAAAGACAAAACAAATGATGCAGAAACAAGAACTGGCTGCAGAGTGAGATGGGC
CGGCCCAGTTTGTGGCGCCCCTTGCGTTTGCCCAGCATCAAATAGTGTTTTCCGGTTAAA
CAGGGGAAATGCTATTCGCCGTACGTTGCGGCAAATTGTTAGGGGTTCGTACACAAAAAG
AGCGGGTCAGGGATGATCTCGGCCAGCCCATTACGGTTGCGGGGATTCCAGTTTCGGAAA
CTTTCTAGAATTTTGCAGTCAGTTTTTTCGGGTTTTCAAAACTTTCTAGAAGATTCCCTG
AATCTGTTTTTCTTCATTTTCGTATTATATTTTTCCGTTTTATTTTTTCTTTTTTCTTTT
TTCTTTTCAGTTTCTTTTTTCTGTTTCAGTCTTAAAAGTATTTTGGATTTTCAAAAAATG
TTCCGGAATTTTTTTAAAATGTTTTCGAATTTCAAAAAATGTTCCATAATTTAAAACAAT
GTTTCGAAATTTGAAACAATGCTCCGAAATTTGAAAATATGTTCGCGTTTCCAAAATTTA
TTCTGGAATTGGAAAAATGTTCCCGTCACAAAACTATTCATCATTATTTTCGAAAACTAT
TTTGGTTTTTGAAATGTTTTTGTTTTTTTTTAAAAGCGCAAAATTTGAAAATATGCGCAT
TTCTTAATTTTCAAAAAATGTTCTTTATTTTCGAAATTTGTTCTCAAAATGCAAAAGAAA
TTTAAATTTTCAAAATTTGTTCATGTTTATGAAGCTCTTCAGGATTTTTGAAAATGGTTC
TCATTTTTCAAAATTTGTTCTCAAGATTTAAAGAATGGTCGTGCTTTCAAAACTTGTTCA
CGCTTTAAAATTTTGTTCGTAGTCCCAAATTTGTTAAGGTTTTTTCAAAATTATTTTGGT
TTAAAATTTTGTTCTCAAGATTCAAAAATTGTTCGTCTTTTAAAAATTCTTCGCGTTTTC
AAATTTGTTCCATGTTTTAAAAAGCGTTCATGTTTACAAAAAATGATTTAAGAAACTCAA
TGTTTTTCATTTTGATAAAAAAGAAAAAAAGGAAACCAAGAAGAAAAACGAACAAAAAAG
AAAAAAATAAACAAAAAAGGAAAAAAGAAGCTACAGTGTCGCGTGCCTAATGGGTCGGCC
CACTCGGGGGTCGCCGTGTGTGTGGGAGGGACTCCCTCCCAGAGCGAGGAGCAGGTAGGA
GTTCTCGTTAAACAGGTCGTACCCGAACACGACATGTTTGGTGCCCAACACACGACATGT
TTGGGACCGTGTTTGGACCTGCAGGCTGGGCACATAGTGTCACGCCCAAGAAGCGACCAT
ATCCTCAATTTGGCACG
