Contig Data
morexGenes
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Map Locations of contig_52988 (7421 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_52988

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67374 3 2689 bp MLOC_67374.2 Available Available LOC_Os06g35410.1, FRAME:+3, EVALUE:0.0, 13106.m03655 protein growth regulator related protein, putative, expressed





CDS Structure of MLOC_67374






Contig Sequence (7421 bp)

>contig_52988 7421 assembly3_WGSMorex_rbca.fasta
AACTAGAGGCTCACTAGGGACCCATTGTGATATATATATTCACACATGTATTACGGTTTC
TGGCTAATACAATTATAGTATGAATAATAGACAATTATNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTCTAGGGCATATTTCCAACATTACATGCCTTAGGCTTTTTG
TGCTGGCGTCGATGCCGAACGGGTTCGTCGCCACTTTTTTTAACCGGTGTGTCATCATAG
CTCTTCCCTGTGACACCATCCTCTTTGGGGGTATCCACCATATACACGTTGTATGTGGAA
GTGGCAGTCTAGCATCCAGCCGTGGGAGCAACGGCTGTATTGACAGTCGTGTCCATATCT
TCGGTCTCCTCCAAGGAGAAGTCTAACATATCGGTTAGATTTTTGGTAGTGGCTATCAAG
TGGGCGGTGGGTGGGAAATAAAGTTCCCTACATCTGGACACAAAGCCGAAAGGATCATAG
ATCGGGGCTGAGCCGTTCGAACTATCCGTACTTCGGGTTTGGACCAGCATCTTGTTTGAC
AGCGAGAGATTGGCCGGACTGTTATTTAGAACTTTGGCAGAGTTGATCTCCAATGTGAGA
GCACAGGGAGTGTGTTTGGATGAGGTTACCCCCGGCTACTCGAACGTGAAGGTCGGATCC
GTGCTCAAGGCTGGATCTCAGATAGGCACTATCCCAGACTCACGGTCGGGAGGGGAACCG
AAGTCAAGCCTTCGGGGTTTCCGGGCTCTTCGGCCGAAGCCGAGATCCCAGCGAGGATCA
TATCACCTTGGGTGTCGGTGACATAATATAACTCATCGAACTTGAATCCCTGGCCTAGGG
CTAAGCCATCGATCTGGTCATGGTGATGAATCGCCTTGAGGTGCGGGGCAGTACCGCCGA
AAGCAGAAAGTTGGCCAAGGAGAAAGATATCCTCGGCCTTATTGTCTTCGGTGGTGACCA
AGCGAGCCATTGATCCTCCTGATGATCCTTGAGTGGAATGTCAATGAAAGCGCCAATGTC
GGTGTCAAAACCGACGGATCTCGAGTAGGGGGTCCGAATTGTGGATCTTGGATCGATGGG
TCACATGAGACAAGGGATAAGATATTCACCCACGCTCGAACCCTCTTGATGGAGGTAAAA
CCCTACCGGCTCTAGTTTATATTGATGGTGTAGTACAAATTACAAAGTTGATCTACCTCA
GATTGGATGTTGTGCTCTAAACCCTACGAGTAATGAGCTTAATCCGTCGTACAAACTAAA
ACCCACTGGTTTATATAGATATCAGGGGCGCTGGGGTTACACAACGTCGGTTACGCCAAA
GAGGGAACATGTCAATCACTACGTGACCATGGAATACACGTCAACTCTTCGAAAGAGTCA
ATCTTGAATACAACATCACTTTATTTATCCGTAGCCTAATAATGATGATAGAATAGCCGA
GGAGTCCGGCCCATAAAAATAGGTAAGCGGCCCGAAGACCCCAAAGTCCCGGACTCCCTC
ACCATCCACCTAAAAATCAGGAGAGGATGAAAAGTATTATTGGAAAGCCCATAACCATCC
CATAATAGGTCTGTGAGTTTGGGTACCCTTTCAAGCTCGAGCTCATTTCAGCTCGCATGA
ACAGTAAATTCAAAAATATATTAAGAATGTTCATTAAAATCTGATTTTTTTTGTGATATA
CTTTCACAAATATTCTAAGTGCTCGCAAATTTTCATCATGAGATCACATTCACATGACAA
AAAATAAAATAAAACCAGTGTTTCAAAATTAGAGCATCGTTTTTTTTTGTTTTGTCATGC
CTTCCTCAAATGTGATCTTACGATGAAAATTTACAAGCATTTACAACATTTGTCAAGATT
CATCATAAAAAAATCAAAAAAATTGTAAATGCTTTGATTTTTTTCTCCGATTTTACAGTT
CATGCATGTGCATTTGAGCATGGAGCACGTCCTGTGGGTTTAGCATTTCTGATAGGTGCT
CTAAGAGCATCTCCAATAGACGTGCTACAGCGCCGGCGTGCAGTTTTTTTTACAACACCG
AAATAGCTCTTTTGCACATCGGACTACACAGTTACTTCACCAGACGCTGGAAATTTTTAG
CATGGTAGAACGCAGCTTCAACATATACGGCAAAATAAAGAGTGTGCGCCTAGCAGAAAC
ATTATTTTTACATTCAATGTGAAACAAAAAAGATCAAACAAAACAAAGAAGATCAAACAA
ACACAAAATAATTCATCAAAAAATAGTTTAATTATTATTACAACTCAAACAAATAATTAA
ACTTTAATACAACAAATAGTTTATAACCAATACAATAAATGTTTAGCACAACAAACATAC
AACATCATGCATTTTGTCACCCATTTCATGCCCACCACTCCTCGGTTAGATTCTTCTGAA
GTTCGTCATGTGTTTCGTCACATCAAATGACATGATATGAGGCAACAAAGCAAGCCACCC
TGTCGACCCTCCTTCGTCGGCGCTATTCGTCGACGGAACGGGGCGCTCCAGGGACGGCCG
CGAAGAAGGAAGCGGCGGCGACCACCGGGGAAGAGCGGGAAGCGGCACGCGTGGGGGAAA
GCGTCGAGGGGTCGTCGGAGAGGATGAAAAAGTCGCGCGCGTGAGTGGATATTTCAGATC
TAGCTGTTGGTGAACATTCACACGAAGGAGTTGTTGTTCAGTGTGCGGTAACGGACGGTG
GAAAAAAACCCAGCATGCAATATAATTATATTCGATGCGTTGAGTGGCTTTTAACGCGCG
ATTTTTACGTGTGCGTCGAAGTTGTCGATTCGGTCCCGTGCTTAAAAAACCGTTTTTTCT
GGTACGCGGCTATTACTTAGCATCTCTGTTGTAGATGCTCTAATCTCGCGCGGTGCAGGT
ACTTTGGCCAACTACCGCGGCAGCGTGTCCTGTGATCGATCTCCGGACGCCGTCGGTTCG
CGGGTCACAACTCACAACTACCGAGCTATACACCGCCCCGACCGCCAACGCTTTCGAGCT
CATCCTACGCCCTACGACTCGTGATTTCCCCGCGCTTTTCGAGCGGCCACCAGTATCGGT
AGCCCCGTCGGCCGGCCGAGACACACATCCACGCGTGTCTGCCACGCGGCCGCCATGGCT
GCAGAGCGGCAGAGTACACGCACGCGCAGCCGCCGTCACCCAGCCTCCTCCATGGTCCAT
GCCATGCGCAGGTGGCACTGTGGGTGCGCTACTCGGCGATGGCAGAGCATATCCACAGCG
ACACATCCAGAGAGGAGAATCTAAACATCAAAATAGTACGTATAACGAAAAAGGAACCGC
GACCGCGCAAGAAACCCGGAGCTGTACTCGTGCGCCAACCAACCAACCAACGGCGGCCGG
CCGGCTACCGACCCCGTCGCCCTTTTCCGTCGTCGCCATCAATCAATCATCGAATCACCA
AACAAACAAACAAACAAGCCCTCCAACCGAAACCTCTCTTGGCTTCTACGGAACACCTCC
CCGTCCCGATACGCGATCCCCGTCCCACCACGCCACCACCTGGCCGCGATCACCACGCCG
CTATATAGGACGAGATGCCGGCGGGTCGCCCTCACGTTACCTCGATCCCCTTCCACGTCC
GTTCACCAGTTCTTTAATCGCGCCTCCCAATTTCTTTATCCCCGCCACGGAGATCGGAGA
TCATCACCCTATCATTCTTTACCTGCCCGCCTGCCCGGTGGTTGCACCGATCGAATGGAA
GCCGCAGCGGCAGCGCCTCGTTTGACCTACCCTTCTTCTATACCACTCTGAGCCCGTACG
GGGGATCGCTGGACGCCCACGCTGCTTGCCCGTCCGTCCGTCCGTCCATGGAACGCAGGT
CAAAAGGAAAGAATAGTTCAACAGCCAAATGGGGCCGCAGTTGCCGTGTTGCTGGACTTG
AGGCACCAGGCACCCCGTCCACGCCAAGCCACCAATGGAGACGCGCGCGGGGCTCCCGGA
CCGTAATGGCGGTGCCTTCTTGATCGACCGGGCGGCGGAGATGGACGGCCCCTTCGTCGT
CGTCGGCCAGACGGGCACGGGCGGCGGCGAGGGCAGGGTCGGCGCCACCAACATCGGGAG
GCTGCGGCAGGGGAAGGCCAAGGGGGGCGGCGTCAACGTCACCTCGTGGCACCTCAGGGT
GTTCGCCGTGGTGGTCGGGGTCATGGGCTGCCTCCTGCTCGCCGCCTCCCTCGTCATGTC
CGCGCTTCACCAGGTGCAGTTCCGGAACGGTGCCATCTCCGTCAACTTCAGGGGCCTCCA
GGTATGCATATGCTGCCACCCCCGATCAAAGTCAGGAAATAAGCATGTTCGATCACGATC
ACCTATCTGTCTGGCTGGCCATCTCTGATCCTCTCGGTTTTCTTTTCCATGGCGTCTGAA
TTTGATCTACCTCTCTGATTATATACTATCATGGATGTGCTCCTTCATACCGTCGCAGAC
TGACCTCAACATTTTGAATTTTTGCACCTTTTCTCTCGGCCTGATGAATCCATCTCTGTG
AATGAAGGAGCTCAAGCAGAATTTTGTCAAGAAGGAACAGTCAGAGCAGATAATGCATGA
AAGACTTTTGCAGATGGCAGCTTTGGCCACCACCAAGGTTTGATTCTGCCATCATAGCAA
TTACTACTACTTCACTAGTTACTTTCTGCAACTGTATCTGGGAACTTGGTATATCTGTTA
CTTTTTACTGATGCTGCACTTTTCCCTTCGTGCCAGTGCAGAACGAGACAGGCAGTGGAA
ATTTCGCACTGTGGGAGGAACCCTACAGACAGGCGCGGAAATGGACACCCTGCGCCGCCA
AATACACCTTGGTCGAAGAAGGTGAAGCTTCATTCAAACAAGTGCAAATAGTTACTCTGC
TTTTTTACCTTTTTTGCTCCCTGATGACACTGAATTTGGTTTAATCTCAGAGCCTAGCGA
GAACAACAACGGCTTCGTTCTCATAAGCGCAAACGGCGGCCTGAACCAACAGCGTGTCGC
CGTAAGGATACAGTGCTTGGATCCTCCTCACAAGATCAGTTCAATTTTGATACGTATTTA
GTACCTAAACGAGCTTCATTCTTCCTCCAGGTGTGCAATGCTGTTGTCGTTGCAGCCCTG
CTTAATGCCACGCTAGTTCTGCCCCGGTTTCTTCACAGCAGCGTGTGGAAGGACAAGAGG
TTAGGAATTTTAACTGAACCGTGTGACAGATACATAGCACTAGTTATTCATCTTTCTACC
AAACAGTAGTGATCATTCATCAATGAATTTGTGGGGTTAACTTTTTCTAGTATGCAAACG
AACTTTGACAAATTTTGTCTTGTGTATCTGCCGTGTCTCTCCTTTTCTACCAGTCAGTTC
GGCGACATCTACCAGCAAGATTACTTCGTGAACTACATGAAGACCGATGTACACATTGTG
AAAGATTTACCACCCCATCTTCAGTCGCTGGATCTCGAGGCAATCGGCAGCCAAGTTAGT
GCCTGAACCATGTCCTGAAAGTTCAGGCTCTCTTGTTCTTCAGTCCCCTTATTCATTTCA
CTCGTCCCCTTGATCACAACAGATCACCGATAACGAGATCACGAAAGAGGCTGAGCCATC
TGAATTCATCAGAACTGCACTTCCCATTCTTCAGAAAAATGGCGTTGTTCATTTCCTCGG
ATTCGGTAACCGTCTCGGCTTCGACTCGGTTCCTGCCGATCTGCAGGTAGCATTTCATCT
CCCTTGACATTATTTTTCAGTCAGATGAACTGATCGAACAATGCACAATGCACCACCGCC
ATCAACACGCCATTGTTGTTCCATTCGTCATCAGATGTTTGTTTGGCTCTGCAGAGGCTG
CGGTGCAGATGCAACTTCCACGCACTCAAGTTCGCCCCGGAGATCCAGAAGCTGGGCTCG
CTGCTGGTCCAACGGCTGCGGGGGGTGAGCGCGATGCAGACGGAGATGGACAAGCAGCTG
TTCGGGAGCAACATGCTGGACCGGCCGTTCGGGGATAAGGGCAGCGACGACGCCGGCGGG
CCGACCAGGTACCTCGCCCTGCACATGAGGTTCGAGGAGGACATGGTGGCCTACTCCCTC
TGCGAGTTCGGCGGCGGCGAGGAGGAGAGGAGGGAGCTGCAGGCCTTCAGGGAGACCCAC
TTCCCGGCCCTCGCGGCGCGCCTCCGGAACACGTAAGCGCGCACGTCGCCATTGCCGCCT
GCTACGCTGATCACGCTGTTCTGCCAGCCCAAGAACTTCACTGATTCGTTACTGATTATG
TCCCAGCACGGTGTCGCCGGAGGAGCTGCGGAGCCAGGGGAGGTGCCCGTTGACGCCCGA
GGAGGCCGGGCTCATCCTGGGCGCGCTCGGCTACGAGCGAGGGACGTTCATCTACGTGGC
CGGGTCGCAGATATACGGCGGCGCGGCGCGGCTGCGCCCTCTCACGCGGCTGTACCCGAA
CCTGGTCACCAAGGAGGACATCCTCTCCTCCGACGAGCTCGCGCCGCTGAAGAACTTCTC
CTCCCGGGTAAGCGAGCGATCGATCGAAACCATTTTCTCGTAGCGACCTGTTTCTGAATC
CGAGCTCTCAGCTCCGTCGACTGACCTGCCACCGCACCGCATCGCAGCTCGCGGCGCTGG
ACTTCATCGCGTGCGCCTCGTCGGACGTGTTCGCGGTGACGGACTCCGGCAGCCAGCTGT
CGTCGCTGGTGTCGGGGCACCGCGTGTACCACGGCAGGGGCCGCGCGCCGACGCTGCACC
CCAACCGGAAGCGGTACGCGCAGATCCTGTCCGAGGAGGCCGGCATCGAGTGGGCCGGGT
TCCAGAGGAGGGTCAGGGCCATGGTGGACGAGTACAAGCGGGTCCGGGCCCGGCCCAGGG
GCCGGACCGTCTACCGGCAGCCCAGGACGCCCGGGTGCATGTGCAGGGCCGGTGGCGACG
GCAGCGTCGACTTCTGAATTTTCTATTCTGATGAAACGACACGATGGCCGGCCATTCTTC
TCCTTTTGCGGTTACTATTTGTTTCGTTCTTTTGTGCATAGCTTAACTTGTAATCTTTTC
TGTAGCTCTAGGAACATGGCAGGTTCGGTTGAAAGGTATAGAGTACATGCGGTTTGATAG
ATTGTAAAAGAGGGGGTTTGCTAGGGAGAGTTGTACAGAAGATGACATATTACGTCTTGC
TAATATTATTTGTTGGGAAAATCTAATTCATAGCGTGCGCATGGCTGCTTTGCCGTGCGG
CGGGACGACAACGTGCGATTCTTTTTGATGTTTGAAATTTAAAAAGTTTTATTTCTGAAA
CCGTTAATTCAATCGATGATCCGTTTTCACCATTGGCTTTCTCGCGACGAGTTCTTCGAA
ACTAGATCCCATATCGATATGTTTCATCAACTTTTTTTTCCTGTTCATACTTGCCACATT
TTTTGAACCCACTTGCCATATTATTAACCACTTCCTTGCCT