Contig Data
morexGenes
Links



Map Locations of contig_52982 (5311 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_52982

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67370 1 492 bp MLOC_67370.1 Available Available None
MLOC_67371 1 1502 bp MLOC_67371.1 Available Available LOC_Os08g29170.1, FRAME:-3, EVALUE:5e-164, 13108.m03013 protein dehydrogenase, putative, expressed





CDS Structure of MLOC_67370






CDS Structure of MLOC_67371






Contig Sequence (5311 bp)

>contig_52982 5311 assembly3_WGSMorex_rbca.fasta
GCCCGGCGCACCCCAACCAAATCAATGTTAAAATCTAAGTTAAAGTCTTGCAGAAGTAAA
CGTCTGCATATCTGTTGAAGGTTCACGCCGCGGAGATTACTTCTCTTCCCGCCGTCAATA
AGGCAATGCTGATCAAACTGTCCAACTTCGAGGAACTTGTTCACATAAACCTGTTTACAA
ATTTGTAAGTGCATCAGCATAGCACTTATGCGTCAGTAATGTTCAGAAACAGCGATTTGT
ATTGTATTATGTCCTTAACTACGCTTATTTTTAAAGTCTCAGAACGCCTGAAAATCTGTA
ACAGATTAAAAACCAGCTGGGCGGCTTGCACGGCCTGGAGATTCTGCTAGGTACAGAGAT
TACTTTTTTTGGTATTAGGTTAAACCTGTTTACGTTTTGTATGTGTCAGTAATGTTGAAG
AACAGATATTCTTATTAGGTTAAAAAATACAACATTGTGTCATGAAAGTATGATCAGCAT
AAAAGGGTGCTATCATCTCCTTGTGTTCCTGCTTATTTCTGTTATGAATTTCTCATGTAG
TACATCCTTTTCCCTGACCATTCTTTTCTGGAGTTGGAGAATATAGTGAGTAATAATTGC
TCTGAAGCAGGAACTATCATCACTCACTTCAGCCATTTGTGAGCCATCCAAGCTTCTTAG
CCATAACGGAAACCACGAGCGAAAATGATTTCTTGGGGAAACGGACTCTACTATACGACC
ACTGAAAAGTTTCTGCCCTCGCAAAAAAGAACAAAAGGAAAGCTTCAACCTGGAATACCA
AGAAACCGTACTACTGGGCCGTGCGAGGATGCTGAACATCACATACCAACTGCATAATTC
AAAAAAAGCAAGTATCTGCATAATTCAAAAAAAGCAAGTATCTGCATAACCCTACCAACT
GCAACTACAAAATAAAGGAAGAATTAGATACCTCTCTCTTCTATAACATCAAAAAGACTG
CTGCAGTTCGTCAGGGAAACGATAATAGATTAAAGTAATATTTGTAAGGCACTCTAATCA
ACTAGAGTAAGTTTTTCATTCTGATCTGCTAGCGAGGCTAGTTAATCATCAAGAGGTTAC
CCTGACGACAAGAAGTGTTGATTGCCCCGGAATTGATCCCCTGGAAGCCTTTTGAACTAC
TATCAGAAACAATAACTGAATGACTAGGTACAACCGTACAAGGCCAGGTACAGATTGAAC
AAAACAAGATCTATGTTCATTGTAATACTTGAGGAACGTACAACCATCTCTCATAACATC
ACATATTTTTCTGCTTTGTATGCACGATCCAACAAATATTTTGCTCAGTAATCCGTGGCA
AAAACACACCACTTGTGCTTGGCTGCTAGCTATTTACAGCGGTGTCTCATGGAACAGGCG
AAATGACCACTTTGCCGGCGGCTCTTCCTGTCTCGAGGTAGGAAAACGCCTCCACGACCT
GGGAGAAGGGGAAAGGCCCCTTGGGGTCGACCACCGGCTTCACCTTCCCGGACTCGAGGT
AAGGGTTGAGCTTCGCCAGGACGGACCCGTCGGAGGTGACCACGAACCGGAACCCCGGCG
GCGTGACCGCGCCGGTGAGGACCACCACGCTGCCGCCTTCCTTCACCACCTTGACCGCCT
TCTCGCCCTGGCCTGAAACCCCCGATCGAGCGTGTGACCGTGTGTCAGCTCCGGACTTAC
GTACTGCTTGCTTGGTGTGTGTGTTTTTGTCAGTGTTCCATTCTGCTGACACAAAGAGAA
CTTACCGACTGCGTCGAACACGACGTCGTACTTGTCCGGCATGTCGTCGAAGCTGTCCTT
GGTGTAGTCGATGGCCACGTCGGCTCCCAGGCTTTTCAGGAGCTCCAGCTTCGGGGTGCT
GGCTGTGGCCGCCACCTTCGATGCGCCGTAAACTTGCTTCGCCAGCTTTATGGCGCCATG
TTCAGTATAGGTTAGTGCATTGACTGGACATAAATTCAGTTGTGAGATTGGACTGAAGCC
AGGCAGGAGCAGTGTCGGACCTGGATGACAAGGGACCCGACTCCACCGGCGCCGCCGAGG
ACAAGGATGGACTTGCCGGCGGAGAAGCCCGCCCTCTCGAGGCCCTCGTGGGCGGTCTCG
ATGGCGAGCGGCAGACCGGCGGCCTGCGCGAAGTCGATGCTCTTTGGCTTGAGGGCCACC
AGCTTCTCCTCCACGGCGGTGTACTCCGCCAGCGAGCCGAACTGTTTGGGACCCTCGAGG
ACCTTCTCGCTGATGTGGCCGTACACCTCGTCGCCCTCCTTGAGGTTCTTTACCTGGCTG
CCGACCTTGACGACGACTCCGGCCATGTCGTACCCTGGCACAGTCTGCAGACCACCAAGT
CCACGACACAACACAACACGCAGGTGATCAAATCAAGGGCTCGGGCTCGGAAGGACGTGA
AGCTGAAGGGGCGCCCGAGCTCACCGGGAGTGGGGAGTCGGTGGCCTTGAACTTGCCCAT
GCGCCGCTTGGAATCAACGGGGTTGAGCGCCGCGGCCGCCACCTTCACCAGCACCTGGTC
CTCGCCCACCGCCGGCACCGACACGGCCTCGTCGAGCTTGAGCACGCTGGCGTCCCCATA
CTCCTCGTACGCCCAAGCCTTCATCGTCCCGGGAACGTCCGTCGCCGTGACGGCCACCGC
CGGGGACGATGACGCCGCGGTCACCACGCTCCGGCCCGGCCCACCGCATCTTCTTGCGGT
GGCGGCATCACTCGTCCTCGCTGCCGGAACCGAGGACAGGAGGAGCTGGGGTCGCGTCGC
TGGGCGCGGGAAGCATGACCTGGAGCATGGATTCGGAAGGATCGAGTAGGCGAGGAATGC
TTGCATCTTGGTAATCTTTCTTATGCTCCTCTGGTTTCTGTGTTCTTCGTGTGCGTGCGT
GCGTGCGTTCTGGTGATTGCTTAGCTTTAGTTTATCAGCTGGGAGTGGCGGGGAATGGGT
GGGGATAGAAGGCTGCGGGAGGATCTGGTTGAGATTTGCGTTGGTGATCGAAGGAAGGAG
AAAGTTCCGCTGGTTGTGACACGTGGCTGGCTAGTAGGCTTCAGGTTCAGCAGGTCACTT
TCCTTGCACACAATTTTTGACGCCAGGAGCAGCTAGCAGGTCACTTGTGGATCTATAAGA
GATGAAGTTCGCCCGGCCGAACATCTAATGACTATTTTTCCAAGATATAAATAATTAAGT
AATCCATCCTCCAAAGGGTTTCAATAGTACCTAAAGTTTTGACCTTCTCAATACCTATGA
AGAGACTGTTGGGTGAAGGGAGTGTAGGGTGTCTCATATTTCTCGTTTGCAAAACCATAT
TAGTCATGTACTAGCAAATTTTGACAGATCAGAGGACCGTACCATGGTCTGAATCCAGTC
TGGTCCATTAGATGTCCCTAAGATGTGTAGGGATGAACTCCAAAACCCTTGAGCAATACA
CTCCTTTTTACCCTCGCAAAAAAACCCTATGAAAACATAAAATTTAGCATCCCTATCCTC
TCTATCTAGCCTTTCTTTATCTCTTCTAGATGTAGTCATAGCAATCATGCTATTATTGTC
ATGTACCTTATATTATATATATATTTCAAAGACTCATGTATTTTATCTTTAGGCATAATC
CTCATCTTAAGCATTTCAACATCATGTGCTAAGTTATCAAGTTTATGTGAGGTGTTATCA
AGTTCTTTTTATTTTGCACTAACCATAGTATTTATTTTTTCGTGGCAACGAATTCTTTAA
TAACACTTTCAAGACCATTCGGTATATTTTATCACTATAAGGCCTAACATAGTTGTTTCC
AAAACTAGTCCTATAAGATTTGTTTCAAAATTATTCCTTCAAACAAATTTACATCAACTT
GATATTTATTTTTTTCAACAAGAGAAGCTACATGTACATATTTAGGAGCTATATGAACTT
GTTTAGAAGAAAGGATATACATGATTATATCCAATTTATTATTTAGACAAGACATTTCTT
CAACATAATTTAACTTCTTGCAAGTCGGTCTCCTTTTAGTGTGCCATTGGGGTAGTTTGC
CATCGTCTCATCAAGTAGATTAGTAACTCCCCGCAAGGTGATTTCCATGAAGGTCCCACC
TACAACAGAGTCTAAAATATTTTTGGACATAGAGTTAAGACCAACATAGAAAGTTTGCAA
AACCATCCACTCACTTACACCATGTGCAGGAAAAATATTAGTCCTAGTTTTCTTCATTTC
CCAATCTTGAGCTACATGCTCATGCTCAGTTTGTTTCGAATTCATGATAAAATTTCCAAT
TGTATAATTTTTGCAGGAGGATTATATTTTCCAGTGAAAGTATATTTACACCTAGTCCAT
ATATCAATACTATTCTTAGGTAAAGATAGCACCTTTCTTAGCTCTAGCTATTAATGAAAA
TGGAAAAGTTGTAATTGACAATATCAACTTGTAGCTATTTATAGTTTTTTCACACAACAT
ATTTTAACAAAATTATTCAAGTGAGAGGCATTATATTCATTATAAGAACCATTGAATTGA
TCTTTCACCACTAAGTTTAATAAAAGTAGGGCTAATTACATAAGATACAACCTAAGTAGT
TTCTCATGCAATAGGTGTACTAATGAAATCATCATCATTAGTACTTGAAACTCACAAAAT
TTGGTATTTTGGGCTGAAATATACAAGATTTAAAGCTTGAAACAAAAGCGAGCGCTTGCT
GGATTTTTGTGTGTGTGGTTTTTTGGTTTCTTGAAAAGCATGAAATTAAACTAAGGAAAA
ATAAAAAGTAAGTAAAGAAGACAAATAAAAAGGAAGCAAAATAATTGAGCGTAGAACATA
TGACTACAAGATGAGCTCCCCCGCTATGGCGCAAGAAATTCTTTAGCAGTTTCCTTGCTA
TAGGAAGTTGTTGCCCCCTCCCCATGAGAAGGGAATGTAGCAAGCAACAAGTATTTCCTC
CACTTGAGAGTAATGTTTATAGACTCATTAGCAGTAATTGAACTACAACCAATGATCAAT
ACCTTCACACAATTACATAACTTCTTCTTGGTCTGAAACTAAACTAGTGAGATTGTTGGT
CTCACTAGCCTTGCTAGTTACACCGATTAACAAGTTGTGTGGTAGGAATTGATGATTGCA
AACAAAACAAAGAAACAATTCAGATTGTAAGGGATAATAAGAATGTTTGATAGAGTTTGT
GATTATGAGGAATAAAGGACCGAGATGTTGGAAATATGCCCTAGAGGCAATAATAAATTG
GCTATCATTACATTTCCTTGTTCACAATAATCGTTTANNNNNNNTGCTAGAATTGTATCG
ATTGGAAACTGATACGTCTCCGTCGTATCTA