Contig Data
morexGenes
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Map Locations of contig_52913 (3970 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_52913

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67335 1 564 bp AK372981 Not available Available None
MLOC_67336 1 1404 bp AK250507.1 Available Available None





CDS Structure of MLOC_67335






CDS Structure of MLOC_67336






Contig Sequence (3970 bp)

>contig_52913 3970 assembly3_WGSMorex_rbca.fasta
AGAGGAAGAGGGAGAACCTCTTGTCACAAATGGGTGATCCTTCTGCCAATCGGCAAAGGC
CATCCGTTGAGCGATCACTCGCAGAGGTTGCTGCTCAGATTGAGGCTGTGACTGAGAAGA
TCATAATGGAGGAAGAGAAGGCAAAGAAGTGGAAGACGGAGAACATCAGGAGGAAGCACA
ACTACGTGCCTTTCTTGTTCAATTTCCTCAAGATCCTCGAGGAGAAGCAGCAACTGAAGC
CCCTGATAGAGAAGGCGAAACAGAATTCTCACGGCCGTAACCCTAAGTGAAACCTGCGTT
GTAAAATTTTATCGTCTTGGTTGTTTTGGTTTTGTGTAGAGATGGCTGACTGGCTTTGTT
TCCTAGCCGAATGTGCCTTGTAGTTCTAGTCCTAGACAGGCCATATATCGATACCGTCCT
GGTTTATTCAGGCAGATCTTAAAACATTCATATAGGGGGAACACCCTGACTCCTTATCAG
AATTATGTGCATCAGAGGGCTGTTTCCCTGTCTAATTCTTCCCAAACTTTAACTGAAAGT
TTGACAATCAAGGCAGTTCTTTTTAGGGTTAAGTTCATATGAACTATTGCATGCATAAAC
CATTAAATAAGTTCTTGAATAATTGCGTCCTCCAAACTGATTCTGACCTATCTTGAAATA
TGAAAAATAAAATATATGTCAAACAACTAAGAATATATTCGTGGCAAAGAACAGAAACAC
ACTTGATTCAGATTTGATACATTACAAGATCAGAACAAGAGCCACAGCCGCTGAGGCATG
GAATATACCACCAAAAAACAAAGGAACACCCCAGCCACGTTTACAGCACACACACAAACT
ACAACATAACAAAACATCCCAAATTATGAATTTGGGAGGCGTGGATGATCCAAACAATGG
CTTGTACAAGGACGAACAGAGCGGCTCACAGAAGCTGCGTGCCAGGAATTCGCTGTTGCG
CCAAACAATGTGATTTAACCTGGGTTCGCAGGCAGAATGCAAGCCAACCACAGCAATTGG
CTGATATACAGTCGATACCCCCGCCACAGAGTGCACACAATTTCACATTGACAACTTTGC
ATCCTCGCCAGTGTCAAGAACCGTAGACCTCAGCACCAGTGGTCGCGGAGCCTTCCAATT
AACGCTTACACTCACTGAACCTCAAGACTCTTCCTTGCCTTTCGCAGATTGCTCCCCCGC
GTCAGCATTTTTCTTGTCACTGACTGGTTTTTTGAACTGCACCAAGATCATGGTCATGTT
GTCGCATCCGTCTCCGCCCATTGTTGATGGAGCCAGGCATCTGTCGAGCACTCTTTCACA
CACTGCAGAAAGGGTGCTTTCCTGCATTTTTGTGTCCTTGTTAAACATAACAAGTACTCC
TATTTGACAGCCGCACAACATCATCTCCTCCAAAGTACATGGTTTAGATAGGAAAATAAC
TTGGCACTCACCGTGTGTATATGCTCGTGGATGAAATCCACCAACTGTTGGCTTGACATA
CAGTCCCTGTTCGTTAAATAAATTTGTTGCTTCTGTTAGGACTCTAGTGCAATATAGCTC
AGATGAAGCATAGCACCTAGCTGCTACTAAGTTATGCACTTCAGCTGCACATGAAACGAG
AGAGCAATGATGGAAAGTGTGGCTATGCACACTGCAGGTGGAGAGCCTTACCAAATGCCA
TCACATGCTAAAACAAGAAAGTCATCCTCATTGCAAAGCTCCACCTAAAAACGAGATTGC
ATTATCTTAGAATGTAGCACAAGGATCATTGCAGATCATGATTTAAGTGCGGAAATTTAA
GGTGGAGCCAGCATTTAGAGGGCTTACAACATTGATGTCAGGATTTGAAGTCACTATTTG
CTTCTCAGGAGGCAAGAATTTGTTCTGCTTAAATTCCATATCTCCTACACAAAGGAACTC
ATATAGGTAAGACACCAAACAAGGCAGAACATACTAATAAAAGGGAAGAAGAAATGCACA
CCAATCGCTCTCGCTAAGTTCAAACTTCCATTTATCCGCCCCATACGTATGAACCCGCCT
GCTTTTAGTATTCTTTCTCTCTCAGCTACAAGCTCTGGCTTGTGGTCTCTGGACAAATTG
TATGCCTGTGATGGATGTGACACAGAACAGACAGTCTGACTGTCAGACATATCTTTATGA
CTAATTATGTGACTAATAGCAGGAACAAGAATACATACCTGGCCAGCCCTAGAAATAACA
CACCGGGAATCACCAGCATTTGCCACTACAAGTTGGTTATTCCTTACTAGTGCTACACAT
GCTGTACTTCCACATGTTGGCCCATCAAAGTCAGAGTGGGGTCCCTGTTCAAAGATTATC
AGTGTGAGATGGCTTAGTGGCCCAAATACAAAGACATACATAAAAACGGCAGTGACATAG
TAACTGCATCTTCAAGACAATGAAAATTATAAAAATAGCTATTACTTTTAGTTTGTAGCT
TGCAGGTTGGTAGTACTGCAATGCAGCGCAAAAGCTAAGCAAACATCACACAAACAAATA
AACCACACAATTATGTATGAACTCCCACATCTATATGTAATCACCGCCAATGCTTTGAAT
TTAGATGCAATTTGTCGATTTCCTCTGGCTATTATCTTGTAGCAAATATGGTGCTGATTG
GCGAACATCACCAAAGCGTGGATATCACTACGTGATAAAACCTATAAACAAAACATGAGA
GCAAGACGCACACAGAAGAAACCCCAGATATAAGTAATCAAAACAGGAATTTCAATAATA
CTCTTCCCTTTCAGTTGGGATAGCTATAACTAACAAAGGATCATCTCTAAAGCAGTAAAG
CCACTTCTTGAGGCAATGCACGGTTAAAAAAAACAGGCACCAAGAATTCTAGCTGAAAGG
TTACGTGTGGTGGACATTGGTATCTTTTAAAACAATAGAGGCAACAATTGATGGTACTTC
AAGATGTTCAGAATATCCATAAAATGCTATATTCAGTGACTAAGCAACGAACTGTACTGT
CACATTTATACTGTGCAGCGTGAACACCATTTTGACAACATAGCCAAGTCTTACATTTTT
TCAAAAAAAAAAAAAAAACTTTGCGTAATAGTCTAAATTGCACAAGTTCACTTTTTATAA
CATTAAGGTTTTGAAATTGTTGCACCAGCCAAAGCTTATGAAACTCTTTTAAGAATCAAA
CACAAATAAGGTCCACACATCAACAGTATCATATTATGTGTTTCTTTATTTTACAATATA
AAGTAGGGTTGTACTCCCATTGCATATATACCTCCTCAAGAGCCCAGTCATCTTCTACAT
TCTTCGAATCACTGCCTCTTGGAGACCAAATCAACCCTTCTATCATGCCACTGAACTTGT
TCATCTTATCTCCTAGTGCAGATAGTTCTCTCCAACCTCTCTGTCCTCGCATCATTTCAT
CCATTCTGAAGTAATAAAACAAAAATTAGTCTTTATCATGTTGATGCTGTAAGTAACGTC
AAAACAAATGCCAAATCTATCTATTGTTTCATGTGGTGATCCAATGACCCATATACCTAA
AGAAAGCTTTATGAACAGCAGTTCCTAGGTCACCAGAAGAATATGCTTCACTTTTGAGAA
CTTGAGAGTGTAGATATTTTGCACAGAATTTGGCAACCACCCTTCCTGCAATATGCAAGA
AATATCAGGATGTGCACCATTTGAAAGACTTAGTTTTAAGGTACAAAAAAGAAAGGGACA
TTTACATTTTCCCCCCTAACTTTGGCCCGACCTCATCTTTACCCCTAAAAAAAATCAGTG
CTCAACTTTGCCCCTCTTCCGTTAGATGGCATTATGGAAATACCCTTCCGTGCCGTTTCC
GTCCGGTCAAAGGGGTTTGACCGTTAAATCGTGGACGGAAAAACTATGCCCAGGAAACGT
CTCGATAACGGTCAAACCCCTTTGACTGGATGGAAACGGCACGGAAGGGGATTTCCACAA
CGCCCTCTAA