Contig Data
morexGenes
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Map Locations of contig_52910 (6201 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_52910

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_67333 1 1498 bp AK366425 Available Available None
MLOC_67334 7 3942 bp MLOC_67334.1 Available Available LOC_Os04g42110.1, FRAME:-3, EVALUE:0.0, 13104.m04146 protein cell division control protein 48 homolog B, putative, expressed





CDS Structure of MLOC_67333






CDS Structure of MLOC_67334






Contig Sequence (6201 bp)

>contig_52910 6201 assembly3_WGSMorex_rbca.fasta
TTTTTTTTTTTTTTTTTTGAATTGCAGGGTGGAGAGTTTCTACGGGTGGAGAGTTTCCAC
CTTGCTGTTTCTACGGGTGGAGAGTTTCTGACCGACGAAATGCAGGGTTGGCGCGAGGAA
ACCGTGGTTATGAGGTCCGAGGGCGGTGACCGGATAATTCTAGCAAGAGGTGAAAATTCT
TGTATACGGAACAGCAAGGTAATTTGGGCAAACTCACTTTGTTATGTCCTGATGCATGAC
TTGTATACGGAACAGCAAGAAATGCAGACTGTAAGTTGACTGGTAGCTGTAATCTGTGTG
TATGCATCCATGCTTACTGCTGAAAGCCTGAACCACTTCACAACCAATCCACATTTCGAC
ATTAGAAACGCAGATGCAAATTGCACAGATTTTGAGATTTAGTTTGCAAACCATTTAACA
TCATGTACATATGTCAGTTTCAGGAGGTGATCAAAGTGGTGGAAAAGGAGCTGGGGTTTG
GTGAAGGCCAGCTCCTTCATAAGCTCTGCAAGGTAAGTTACACTTTTAATTCCCGTGTAC
GGAGTATATAAAATATAACATCATAAATGCAATATATTTTGTGTTACTGAAAGAAAGAAA
ACATCTCTGTTGCATAGGTCTATCTGTTTGTATCTGGTGGGAGGATAGTGGGATGTCTAG
TTGCCGAACCGATAAAAGCAGCACACAAAGTTATTCCAAGCTCTGCATCGGAAAACCGAA
GCAATTTGCCGGACAATAAAACTGAATCAGCACAGGCAAACCATACATTAAAGTTTGGGA
AAATAAGTTTCAAGAGGGAAGTCCTACGACGGCATAATCACCCCGACAAGAACAAAGAAG
TGTGCCAGGGCCCTGGCGCCATAGTCTGCGAAGAAGAAGCTGTTCCCGCCCTCTGTGGAT
TCCGGGCCATCTGGGTGGTGCCATCGTGCAGAAGAAAGGGAATAGCATCACAGCTAGTGG
ATGCTGCACGGTATGTTCTCCAGGCCCTTTCCTTGCAGTTTTCTCATGTCTTGAGAACTC
ATCACTGTCAAACATGCGCTCTTCTCCTTAACAAGGGGACATGATAGCATGATGTGTCAA
ATTTTCACCAGACTGCATACATTCTTGCTACTAGACTCGCTGTGACTGATATCACCCTGC
AAAGATAGATCACTGGTCTATTGAGCTTGCCTCCCCTGTCCTGATGATGTGCTTCCATTT
ATCTCCTGCAGGAAGAGCTTCTGCGAAGATGGCGCATTGGGGATATCACAATGCGCTTTC
ACGCCACCAACCTCTGACGGGAAAGAGCTAGCGTCAAGCTGCTACAAGACCAGTGCATTC
TTAGTCTACAGGAATGGAGATGTATAGAGAGGTCCTCCCAAAATTGGAAAGCAAGTGTTA
AACAGCTGCAAAAGTCAGTCATGTTGAGTACTTGACACATAAACAGGGCACATTCTGCTC
TTATAGTGCCGAGGTCGTCATGTTTTCTTCCGTCGGCAAAGATAGCCGAATGCTGTTACA
AGCTACTGTATTTCATTATCAGTTTGTCAATATAGCGAGGCCTGACATGTTTAGACAATT
TGTAGAGAAAAATAGCAGCTGGCAAACACAACCAGAGTCACTCGAATTCTCATTTTTCAT
TAAAAAAAAGAAAGAACCACACAAATGTATCATGATGCTTGTGTTATCCAAGGGTTGACT
GGTCTAAAATGCTTGTGTTATCCAAGGGTTGACTGGTCTAAAATGCTTGTGTAACACGAA
CTTGAACAAAAGCTCAATAGATACATCATAGTCTAATGTTTCCTCATCATGGTCTAATGT
TTCCTAGCTGATGGGCCATGTATGGCGGCAGCTGCGTACTCGTCAACTTCTGCTTTCGTC
AGCGACGGCCTTAGCGACCTTATTGCGGCCTCGAAGTGAGCCTTGTGTATCGAACTGGCT
GACAGGTCTGCCCTCAGTGCCGCCATTCCTGCTTCCCTGCACAGGCCTTCGAGATCAGCA
CCAGTGAACAGCTCGGTGCGCTCCGCTATCTCCCCAACGTCCACATCCTCCCCCAGCTTC
ATCTTCCGTGTATGGATGCGTAATATCTCTTGCCTGCCTTGTGCATCTGGCGGTGGAACG
TACAACACCTGCAGTTCAAGAGAAAGTTATGGTGGCTGCAGATGTGCATGCTAGAGGGAA
GGGCGGTGATAGGGAGGTACCATATCAAAGCGCCCTGGGCGGAGAAGAGCTGCATCGATT
GCCTTGGGGCGGTTAGTAGCGGCCAAAACAATAATCCCCTACAACATATATCAAGATAGT
CTTTTATTTTGTATTACAAAGAGAAGTAGGGATTCAGTAGAATCAAGTTGAAAACTATCA
GCAAGCTAAGATGTACCGTAGCCAGTTCTAAACCATCCATTTCAGTCAACAAAGTTGATA
GGAGTCTTTCTCCTACCGTGGCATTGCCAGTGTCCCCACTAGGACCGGTTCTGCAAGATC
ATACAAGTGCCAACCTAAGTTATTTCATTGCAAAATTGGCATCTCGAAGCTTAGTACTGA
GTAGCAAAAAAAAAACAAGGGCACAACTAAAGTTCAAAGAAATCTCGGTTATGGTCTTGA
TAAAAACAAAATTCAGAAACAGTTCCTAAGAAAATGTGTTAACACTATTAATTGCCAATA
CATGAACAAGTTTCTTGCTGCACCATACCAAATGCAAGTTTCCTGATCACATAGTTATAA
AAGGATAAAAGTTTATATGAATAATGTTCTACAGGCTCTCTTTTACTAAAATCACAGATC
AATGTAGATATGATGTGTTTGTGTTCAATATTTAGGACACAAGGATCTCATACCTTTTAG
GAGCAATTGCATCAGCCTCATCAAAAAATATAATGCTTGGAGAAGATAGCCTTGCCCTCT
GAAATGTTCTTCGCAACAAAGCTTCACCTTCTCCAACATACTTCGAGTATAGTTCTGCAC
CACTGGTCAACAATATATTTCAAAACCTAGATGACCTTCGATGAGGAGTGCATCCTGAAC
AGAAGATAGCTAGGCCAATTTTCTACTCATTAGTTTAAGCTTGCGCAAACTTCAGGATCA
CAGCATACTATAACAACTAAACTAGCAAAAATAATCATATTTATAGTAAGCCAGCTTGAT
CAAAATACCATACGAATTGGAAAAGAAAAGGAAGTTCATGTTTCTGTGCCCAGAAGAACT
TCATGTTGTTTCCTTCCTCTGACAAAAAGCCCACTATATCGGGGATTAATTGGGCTCACT
TTGATTAAACAAAATGTATGGACTCTTCCACAAAGTGGATTCGTGAGCTGCAACTTTATT
CAAAGAATAGACACACTATGACAGACCTCAAAGAAAAGAAAGAAGCTTGGGCTGCATGTG
CTGCAGCCTTGGCAAGGGTGGTCTTTGAGCACCCTGGAGGACCATGCAAAAGCACACCAC
GAACTGGTGATATCCCCAGTCTTGCAAATGCAGCAGCATGCTTGATGGGCCACTCAACAG
CTTGCTGGAGCTTTTTCTGCAGCACAGGGACAATCACCGTCACGAAATTGTTTGAATTAT
ATAAGATATAAGGTCTAAAGTGAAATATATCTCACCTTCAGATCTTTCAAACCTCCTATA
TCATCCCATGAAACAGTTGGAGCTTCTTTAGTTACCCCTCTTATCATGCTTGCTTTGACC
TGAGATCTAGCAGACTCCCAATCTTCCATGAGTAGTGTGAGCACCTTCCCATCCTCGGAT
GAGTTTGACAATCTACGGTAAGCAAGTCTGGCAGCTTCTCGACATAGAGCTTCTAGATCA
GCCCCAACATAACCATTGCACCATCCAGCAATAATTTGAAGATCAACACTTTCATCAAGA
TGCAGATTCTTGGAATAAAGCTACAGAAATAAGGCCTATTAGACTTCAAGCAAATTGGTG
ATATCACTTAATGGATTCAGACAATGCAGGTTTTGCAGCATTATGTTACAAACATTTTAG
GCTCAGTACAAAAAATATCAAGCAGTGGCAAGTGATATCAGTTTTATGCAGGCATTCTAG
GGCGTGTATCCAAAAGCATAGCACTTTGCAGATTTAACCATACAACCGGAGTGATAAGCA
GTATGCAATGTAGAAGACATCACAGAGATAGATAAGAAGAAATCAGTATTAGCCCAAATA
GAAAGTTTATGCTACCTTAAGAATCTGCAGCCTTTCTTCTAACGTAGGAACAGTGACCTC
AATCTCTGAGTCAAAACGTCCTGGCCTCCTCAATGCTGGATCGATGGCATCCACCCTACA
GATTACAAGACGAGATATTGTTTCAATAGAACTACTTTCATGAGATGATATACAAACTAC
AACCAGTGTCCTAGTGGAGAGACTGTTAAACATGGCTGTTAAAATAGCAATCACAATCCT
CCAACTGGCGTTTCTAACCTGTTTGTTGACGCAACAACGACTACATGAGGAAGCTTCTTC
GACGATTTCTTATTTCCATCCATCAGAGTTAGCAGCTGACCAACAATGCGGGACTCTTGC
TCTCTCCTGTGAGGAGTACAATGAGAAAACAGATTTCAACAAGCACCAAACAAGATAACA
TGGTAAACATACCTACTGTTACGGCGTGGACATATAGCATCCAATTCATCGATGAAAATA
ATGGCTGGTCTGCCCTGTGACGCCTGGGAGTAGGATTCAGAGAAAGCTTCACGCAGGAAC
TTCTCGCCCTCTCCAGCATGAGCTTTATGGACAGAATACGGGCTGTCGAGACAGGCAGAT
TAGAGCGCTTAATGATTATGCCCAAATACACATTGAGAAACAAATGGTACTCCTATTTGG
CAGATTCAGCCTAAAATTGTAGGTATGGATGCCATCAAGTTGATGTAGTACTTGATCATT
GTCAGATGGGCATTGCATTCTCGAACCATGGCTTGAACCAGGCTTGTCTGACAAGAAGAA
CAAGAAGCAATCCTAAGAACCACACTGGTCAACATTTGTAAAACGATCAAGACATGTCGA
TGCTAATGCAGTACCTTTCCTGTGCCAGGGGGGCCGTAGAGCAGCAATCCTCTGGGCCAC
TGCAGAAGCAAGAGCACACAGCATAAGGAGCACACAAATTGGCTAGATAAAGCTCGTCAG
CTGATGAAATTGGCGGGGTGAAGAGAAGGGGACAGGAGGTAGTAGCACCAGCACCTTAAG
CCCGAGCAGGCGGGACTGGCGAGCGTAGAGGAAGGGATAAATCACGAGCTCCCGGAGAGC
CTGAAGGGCCATGCGGTTCCCGGCGACAGCCTCCTCCGCTCGCCAACGTGCAACCGTCTC
GCCGTCGTCCCCATTAGCGCCGCCTCTGTCCCGTGCTGCCATTACCTCGCCCATTCGCTT
ATTTCAGCGCTCTCCGAGACCGGCGTGCGGGACGTCAAGTCGTCGTCGTCGTGCAGGCCG
GACGGTAAGCCGCGCCGACTGCGGAGAGTCTCAGGGGTCGCCGGAGCTGCAAGCGAGAAC
CCCGGGATAAGCCCTAGTGAGCCTTAGGACGCCGCAGGCACTGTGGCGGCGAGTAGAGCG
GCGGCGGTGCTCGCGGGGAGGGAGAGGAGGCGACTCTCACCGCGGGGAGGTCCACGTGCC
GCCCTCGCCTTTGCCGCTGTCGCAGCAACCCAGAAGAGGAAGGAGAGCGGAGGCGCGAGG
GAGAGGAGGAAGGTGAAGGGCGGCCGCGGCGGCGGCGACGGAGAGGAGCGGGTGGAACGG
CGAAGGCGGCCCAGCAAGCCCTGCTCTCGTCTTAGTGCGACGCCTAGGCACGGGACGGCT
CTCCTCCAGCGAGGCCGAACTAAGCCGGCCCAGTAACAACAAGTCGCGTAACGCTAAGGT
CATGCGTGTTTTCTTTTTGTGCGTGTGTTTTTTTTCGTTTTTCCTTCACTCTTTTATTTT
AGAGTTAATTTAATTTACATTTCCAAATGTTCCATATATATTACAATAAAAACTGAAATC
TATTATTCTAGTATTTGAACAATATTAAAAAAAATCCCGCAAAAAAAAGAACAATATTAA
AATGTATAGAAAAATTCTGGTGCATACAAAAAATGTATAACGCTAACAAAAAGTATAAAT
GTTAATCATGTGTACCAAAAATGTTAAATCACGTGTACGAAAAATGTTAATCATGTGCAT
GAAAAATGTTTCTGAAAATTAAAAGATGTCACATTTCGAACAAAAATACATGGCATTTAA
AAAGTGTTTATACAATGTAAA